Lagopus muta (rock ptarmigan): 125685356
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Entry
125685356 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04145
Phagosome
lmut04210
Apoptosis
lmut04530
Tight junction
lmut04540
Gap junction
lmut04814
Motor proteins
lmut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125685356
09143 Cell growth and death
04210 Apoptosis
125685356
09144 Cellular community - eukaryotes
04530 Tight junction
125685356
04540 Gap junction
125685356
09142 Cell motility
04814 Motor proteins
125685356
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125685356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125685356
03036 Chromosome and associated proteins [BR:
lmut03036
]
125685356
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125685356
04147 Exosome [BR:
lmut04147
]
125685356
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125685356
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125685356
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125685356
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125685356
Exosomal proteins of other body fluids (saliva and urine)
125685356
Exosomal proteins of colorectal cancer cells
125685356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
125685356
NCBI-ProteinID:
XP_048784311
LinkDB
All DBs
Position
28:complement(3194966..3198320)
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AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLLVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEEDGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgtgggccaagcgggcgtgcagatcggcaatgcctgc
tgggagctgtactgcctggagcacggcatccagcccgacgggcagatgcccagtgacaaa
accatcggcgggggggacgactccttcaacaccttcttcagcgagacgggggctggcaag
cacgtgccccgtgccatattcgtggacctggagcccactgtgatcgatgaggtgcgcaca
gggacgtaccggcagctcttccaccccgagcagctgatcacgggcaaggaggatgcggcc
aacaactacgcccgggggcactacaccatcggcaaggagatcatcgacctggtgctggac
cgcatccgcaagctggctgaccagtgcacggggctgcagggcttcctggtgttccacagc
ttcgggggcggcaccggctccggcttcacctcgctgctgatggagcggctgtcggtcgac
tacggcaagaagtccaagctggagttctccatctacccggccccgcaggtgtccacagcc
gtggtggagccctacaactccatcctcaccacccacaccacgctggagcactccgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgag
cgccccacctacaccaacctgaaccgcctcatcagccagatcgtgtcctccatcacggcc
tcgctgcgcttcgacggcgctctgaacgtcgacctgacggagttccagaccaacctggtg
ccctacccgcgcatccacttccccctggccacgtacgccccggtgatctctgctgagaag
gcctaccacgagcagctgttggtggccgagatcaccaacgcgtgcttcgagccggccaac
cagatggtgaagtgcgacccacggcacggcaagtacatggcgtgctgcctgctgtaccgc
ggggacgtggtgcccaaagatgtcaacgctgccatcgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccaccggcttcaaggtgggcatcaactaccagccgccc
accgtggtgccggggggggacctggccaaggtgcagcgcgccgtgtgcatgctgagcaac
accacggccatcgccgaggcctgggcgcgcctggaccacaagttcgacctgatgtacgcc
aagcgagcctttgtgcactggtacgtgggggagggcatggaggagggggagttctcggag
gcccgggaggacatggctgccctggagaaggattacgaggaggtgggggctgacagcgtg
gagggcgaggaggatggggaggagtactga
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