Lagopus muta (rock ptarmigan): 125685363
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Entry
125685363 CDS
T09141
Symbol
EMG1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125685363 (EMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125685363 (EMG1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
125685363 (EMG1)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
Other 90S particles
125685363 (EMG1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
125685363
NCBI-ProteinID:
XP_048784319
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Position
1:77466266..77470979
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AA seq
232 aa
AA seq
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MAAPRRPRGEKEQDEDDALLEAKRVRGQRRLLVVLEGASLETVKVGKTFELLNCDKHKAL
LLRSGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDR
FCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHLPVGCMKIGTSFAVPNVTDLRELVPT
AEPVTIVVGAFAHGSVNVDYTEKMISISNYPLSAALTCAKITTAFEEAWGVV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccaggcggccgcgtggggagaaggagcaggatgaggatgatgctctgtta
gaggctaagcgcgtccgcgggcagcgacggcttctggtggtgctggaaggggcgagccta
gagacagtgaaggtggggaagacgttcgaactccttaattgcgacaagcataaggcgctg
ctgctgcggagcggccgggaccccggagaggtgcggcccgacatcacccaccagagtctt
ctcatgcttatggacagccctctgaatcgggctggtcttctgcaagtttacatccatacc
caaaagaatgttttaattgaagttaatcctcagaccaggatcccaagaacatttgatcga
ttctgtggtcttatggttcagttgctgcataagcttagtgttcgagcagctgatggtcct
cagaaattgttgaaggttattaaaaatccagtcagtgaccatctacctgtgggctgtatg
aagataggtacctcttttgcagttccaaatgtgacagatctgcgtgaactggttcctaca
gcagagccagtaactattgttgtgggagcttttgcccacggttcagtcaatgtggactat
acagaaaagatgatctctatcagcaactatcccctctctgctgccctcacatgtgctaaa
attactactgcctttgaggaagcctggggagtagtatga
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