KEGG   Lagopus muta (rock ptarmigan): 125685575
Entry
125685575         CDS       T09141                                 
Symbol
PYM1
Name
(RefSeq) partner of Y14 and mago
  KO
K14294  partner of Y14 and mago
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03013  Nucleocytoplasmic transport
lmut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125685575 (PYM1)
   03015 mRNA surveillance pathway
    125685575 (PYM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmut03019]
    125685575 (PYM1)
Messenger RNA biogenesis [BR:lmut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125685575 (PYM1)
SSDB
Motif
Pfam: Mago-bind AAA_23 CDGP
Other DBs
NCBI-GeneID: 125685575
NCBI-ProteinID: XP_048784667
LinkDB
Position
28:3189475..3191522
AA seq 206 aa
MATPYVTDETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELPPG
LSLEPNAQPGKQPSKAEGGESGLSKTAKRNLKRKEKRKQQQEKGERETDELIQSLEKVSL
SGGSGGDTRAAAPQPACSAQSSADGEAAASEKSKKIKNLRKKLRQVEELQQRLDSGEIKQ
PTKEQLEKLGRRKALEEELQDLELDL
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgactccctatgtgactgatgagaccgggaagtacatcgcctctacgcagcgccct
gacggcacctggcggaagcagcggcgcgtgaaggagggctacgtgccacaggaggaggtg
ccggtgtatgagaacaaatacgtgaagttcttcaaaagcaagcctgagctgcccccgggg
ctgagcctggagcccaacgcccagcccggcaagcagcccagcaaagcggagggcggggag
agcggactgtccaaaacagcaaaaaggaacttgaaacgcaaggagaagaggaagcagcag
caggagaaaggcgagagggaaacagacgaactgatccaatcgctggagaaggtctccttg
tcggggggcagcggcggggacacgagagcggccgcaccgcagccggcctgcagcgcccag
agctccgctgacggggaagccgcagcctcagagaaaagcaagaagatcaagaacctgagg
aagaagctgcggcaggtggaggagctgcagcagcggctcgactctggggagataaagcag
ccgaccaaggagcagctggagaagctgggccggaggaaagccctggaggaggagctgcag
gacctggagctggacttgtga

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