Lagopus muta (rock ptarmigan): 125685585
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Entry
125685585 CDS
T09141
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125685585 (CACNA1I)
04020 Calcium signaling pathway
125685585 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125685585 (CACNA1I)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125685585 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
125685585
NCBI-ProteinID:
XP_048784690
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All DBs
Position
1:complement(49607901..49765367)
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AA seq
2204 aa
AA seq
DB search
MAECIPKPPSTWPMGPQPHNTSAACSLEPVNMGVSEQQMPLEQPPSSPELGEDEEVTSPP
DPDVPYPDLAPVVFFCLKQTTSPRSWCIKMVCNPWFECVSMMVILLNCVTLGMYQPCEDM
DCLSDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEY
SLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGI
IGVQLWAGLLRNRCFMEENFTIQGDIVLPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPP
LKERGHECCLDKDDYYYYNSVRQEFNVSGMCVNWNQYYNVCRTGNANPHKGAINFDNIGY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYVCHIMRKAKRRTLGLYNSIQSRRQ
GHVEPSDAQRGANRKKQRHYSKDCTGICQQHNPLDCPPQGLVQPIAVTATSDLTNCPRCH
RGEHDTSRRLSVLDSADSDQEDGGDSEAEGEGCRGDQSASVLEKEEEEVEEGGKMKLCSD
MWREVRVKLRGIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNVVFTSMFA
LEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQSDGGLSVLRTFRLLRVLKLVRF
MPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNF
DSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEG
FQAEGDANRSYSEEDQSSSNMEELDQFQEIQEGSDPKLCAISVTPNGHLDPSLPSSNAPV
AAGGVSNSSRNSLQPDQIRVAVGSRKSSVMSLGRMTYDQRSLSSSRSSHYGAWGRSGAWG
SRRSSWNSLARGHSLKHKPPSAEHESLLSGERHRAGDRELDGAERVFHHRRTLSLDNKDS
CDLLELASIPSGHRGTCRPGTTSGGSEHQDCNGKMPSIAKEIFPKMNNRKERGEDDEEID
YSLCFRIRKMMEVYKPDWCELREDWSIYLFSPQNRFRLLCQTIIAHKLFDYVVLAFIFLN
CITIALERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQAYLRSSWNVL
DGFLVFVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSL
KPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCMAANYKWVHHKYNF
DNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVL
NMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKAQPKCLVEAQRLPYYATYC
PIRLLIHSVCTSHYLDIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYLFTTVFVLEA
VLKLVAFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEG
MSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCSHDDRSCLSNLQFISPLYFVSFV
LTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEFAHGLCSRKSGSSKSRQGKGA
GTGSGGGRTEPEGRMCTRCYSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFHHYSS
PAMCEKCNHDKQEVQLAEMEALSLNSDKSSSILLGDESDNRSTSQLSPKETKDGQDSPDS
TEAGDLGEHLLPISSTDGSTNPDSYLCEIEKTPFNSVQSWLKHEGTKVPPSPFSPGTSCP
LLPVPAEFFHPAISAAQTGPEKVSCAHNLPKISLQGSWASLRSPSVNCSLLHQAPESDTS
LDSRSSSSAGSLQTTLEDSLNLSDSPQCTLDLPVALCPMPAAGDQRPLAAPLSPTSRRRS
LRGRGLFTLRSIRRHQRSHSSGGSTSPGCTHHDSMDPSDEEGAGSSLRGGGNNSEPSETL
SSLSLTSLFSPPPPGLTLGKKCSSTSSLHASPSLRRPAAHHTKPFYTVDPKGFLSMPSWV
TDFCKDTPPQVQGAEPDGPSRLGTGECGSLLPSELGDGVSKRNR
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtgcatccccaagcctccttccacctggcccatgggtccacagccccacaac
acctctgctgcctgctcactagagcctgtgaacatgggggtctcagagcagcaaatgcca
ctggagcagcccccatcctccccagagctgggcgaagatgaggaagtcacctccccgcca
gatcctgacgttccctatcctgacttggccccggtcgtcttcttttgcttgaagcagact
accagcccacggagctggtgcatcaaaatggtgtgcaacccttggtttgagtgtgtcagc
atgatggtgattttgctaaactgtgtcaccctggggatgtaccaaccatgtgaggatatg
gactgcctttctgacaggtgtaaaatcttgcaggtatttgatgatttcatcttcattttc
tttgcaatggaaatggtgttaaagatggtggccctggggatctttggcaagaagtgctac
cttggagatacctggaaccgcctggatttcttcattgtcatggctgggatggtggagtac
tctctggatctccaaaacattaacttgtctgcaatccgtactgtccgcgtcctgagaccc
ctgaaagctatcaaccgtgtacccagcatgcgcatccttgtgaatttgctcctggacacc
ttgcccatgctggggaacgtcctcctgctctgcttctttgtcttcttcatcttcggcatc
atcggggtgcagctgtgggctgggctgctccgcaaccgctgcttcatggaggagaacttc
accatacaaggtgacattgtcctgcccccgtattatcagcctgaggaagatgatgagatg
ccctttatctgctcactgtcaggagacaatggaatcatgggctgtcatgagatcccgccc
ctgaaggaacggggccatgagtgttgtttggacaaagatgattattattactacaactca
gtccggcaagagttcaacgtcagtggcatgtgtgtcaactggaaccagtactataacgtg
tgccgtacaggcaatgccaatccacacaagggtgccatcaactttgacaacattgggtat
gcctggattgtgatatttcaggtgatcacactggaagggtgggtggagatcatgtactat
gtgatggatgcccattcattctacaattttatctactttatcttgctgataattgtgggc
tccttcttcatgatcaatctgtgtctggtggtcattgccacacagttctcagaaaccaag
cagcgggagcaccagcttatgcaggagcagcgggcccggtacctctcctccagcaccgtt
gccagctacatggagcccggagactgctatgaggagatcttccagtatgtctgccacatc
atgcgcaaagccaaacgccgcacccttgggctgtacaacagcatacagagccggcgccag
ggccacgtggagccgagtgatgcccaacgaggtgccaacaggaaaaaacagaggcactac
agtaaggattgcacgggaatttgccaacagcacaatcctcttgactgccctcctcaaggc
ttggtccagcccattgctgtgacagcaacctctgatctcaccaactgcccccgatgccat
aggggggaacatgacacatcccgaaggctgtctgtcctggacagcgctgactcagaccag
gaagatggaggagacagtgaagcagagggagaaggctgcagaggtgaccagagtgcctca
gtgctggagaaagaggaagaagaagtggaagaaggtgggaagatgaagctctgtagtgac
atgtggcgggaagttagggtgaagcttcgagggatcgtggacagcaagtacttcaaccgt
gggatcatgatcgcgatccttgtgaacactatcagcatgggcattgagcaccacgagcag
ccagaggaactgaccaacatcttggagatcagcaacgttgtctttacaagcatgtttgcc
ttggagatgatcctgaaacttgctgcttttggtctgtttgattaccttcgcaacccctac
aatatctttgacagtatcatcgtcatcatcagcatctgggagatcattggtcagtcggat
gggggcctctcagtgctgaggacattccgtctcctgcgtgtgctgaaattggtacgtttc
atgcctgcattgcgccgccagctcgtggtgctgatgaagactatggacaacgtagccacc
ttctgcatgcttctcatgcttttcatcttcattttcagtatcttgggaatgcacatcttt
ggttgcaagttcagcctgaggacggatacaggtgatacagttcctgatcggaaaaatttt
gactccctgctgtgggccattgtcactgtcttccagatattaacccaggaggactggaat
gttgtgctctataatggcatggcctccacgtcaccatgggcatccctttactttgtggct
cttatgacatttggcaattacgtgctcttcaatctgctagtggccatcctcgtggagggg
tttcaggctgagggtgatgccaaccgatcatactcagaagaagatcagagttcatcaaac
atggaagagttagatcagttccaagagatccaggagggctcagatcccaagctttgtgca
atttctgtgacaccaaatggccacttggacccatccctgccctcttccaatgccccagtg
gctgctgggggagtttccaactcctcacgcaactccctgcagcctgaccagatccgtgtt
gctgttggctcccggaagagcagtgtgatgtccctggggagaatgacttatgatcagcga
tctttgtccagctctcgcagttcccactacggtgcctggggccgcagtggggcctggggg
agccgtcgttccagctggaacagcctggcacgaggacacagcctgaagcacaaacctccc
tctgctgagcatgagtccctcctgtccggggagaggcacagggcaggagatagggagctg
gatggagcagagagagtgtttcaccaccgccggacactctctctggacaacaaagactcc
tgtgacctactagagttggcctccatcccatctggccacagagggacctgtaggccaggg
acaacatcagggggcagtgaacatcaagactgcaacggcaaaatgcccagtattgcgaaa
gagatcttcccaaaaatgaacaaccgcaaggaacggggagaggatgatgaagagatagac
tacagcctgtgttttcgcatccggaagatgatggaagtctataagccagactggtgtgag
ttacgggaagactggtccatatatctcttctctccacaaaacaggtttcgcctcctctgc
caaaccatcattgctcacaaactctttgactacgttgtgttggccttcatcttcctgaat
tgcatcaccattgcactggagagaccacagattgaacacagaagcacggagagaatcttt
ctcactgtgtccaactacattttcacagcaatttttgtagctgagatgacactgaaggtg
gtctctctaggcctgtattttggggatcaagcttatctccgcagcagctggaatgtcctg
gatggcttcttggtcttcgtgtctctcatcgacattgtggtctcagtggcttctgctggt
ggtgccaaaatcctaggggtgctgcgggtcctccggctactgcgcaccttacggccactc
cgagtcatcagccgagcccctggcctcaaactggtggtggagacacttatttcttccctc
aagcccataggaaacattgtcctcatctgctgcgctttcttcatcatctttggcatcctg
ggtgtacagctcttcaagggcaagttctaccactgcctaggggttgacatcaggaacatc
accaaccggtctgactgcatggccgccaactacaagtgggtgcaccacaagtacaacttc
gacaacctgggacaggccctgatgtctctctttgttctggcttccaaggatggctgggtc
aatattatgtataatggactagatgctgtggctgttgaccagcagccggtgaccaacaac
aacccctggatgctcctctacttcatctccttcctcctcattgtcagcttcttcgtgctc
aacatgtttgtgggggtagtggtggagaacttccacaagtgccgacagcaccaggaggct
gaggaggcccgccggcgagaggagaagcgcctgcggcgactggagaagaagcgaaggagt
aaggcacagcctaagtgtttggttgaggcgcagcgtttgccgtactatgctacctactgc
cccatacgcctcctaatccattcggtctgcacaagccactatctggacatcttcatcact
ttcatcatctgcctcaacgtggtcaccatgtccttggagcactacaaccaacctgtgtcc
ctggagaccgctcttaaatactgtaactacctgttcaccactgtgtttgtgttggaggca
gttctcaagctggtggccttcggtctacgtcggttcttcaaggacaggtggaaccagcta
gatctggccattgtgctgctgtctgtcatgggcattacattggaagagattgaaatcaat
gcggctctcccaattaaccccactatcatcaggatcatgagagtgctgcgcatcgcccgt
gtcctgaagctgttgaagatggccactggaatgcgagcactgctggatacagtcgttcaa
gccttaccacaggtggggaaccttggactgcttttcatgctcctctttttcatctatgct
gctctaggagtggagctttttggaaaactggtatgcaatgatgagaacccctgcgagggc
atgagccgtcatgctacctttgagaactttgggatggccttcctcacactcttccaggtg
tccacgggagacaactggaacggaatcatgaaggataccttacgcgactgcagccacgat
gaccggagctgcctcagcaacctgcagttcatctccccactgtactttgtcagctttgtg
ctcacagcccagtttgtcctcatcaatgtggtggtagctgttctcatgaaacatctggat
gacagcaacaaggaagcccaggaggatgcagaaatggatgctgagattgagctggaattt
gcgcatggactgtgctcccgcaagtcaggctcctccaaatcaaggcagggaaaaggagca
ggaacaggaagcggtggtgggagaacagagcctgaaggacgtatgtgcacgagatgctac
tctcctgcccaggagaacttatggctggacagtgtctctttaattattaaggactccttc
gacggggagttaatgatcatcgataacctatcgggctccgtcttccatcattactcctcg
ccggccatgtgcgagaagtgtaaccatgacaagcaagaggtccagctggctgaaatggaa
gcattatccctcaattcagacaagtcctcttccatccttctaggagatgaatcagataat
cgcagcacttctcagctgagtcctaaggagaccaaggatggccaggacagccctgactcc
actgaggcaggagatctaggggaacacttgcttccaatatccagcacagatggctccaca
aacccagacagttacctgtgtgaaatagagaaaactcctttcaactcagtccagtcttgg
ctaaagcatgaaggtaccaaagtccctcccagccccttttctccaggtacatcgtgccct
ctgttacctgtaccagcagaatttttccacccagccatctctgctgcccagacagggcct
gagaaggtctcgtgtgcacataaccttcctaagatctctctgcaaggctcatgggcatca
ctgagatctccgagcgtgaactgttcacttcttcaccaggctcctgagagcgacacatca
ctggacagtcggagcagcagctcggcgggcagcctgcagaccacactggaggacagcctc
aatctcagtgattctccgcagtgtaccctggacctccccgtggccctgtgccccatgccg
gctgctggcgaccaaagacccctggcagctcccctgtcccccacctcccgtcgccgcagc
ctacggggccgggggctcttcaccctgcgcagcatccgtcggcaccagcgcagccacagc
agtggtgggagcaccagccctggttgcacccaccatgactccatggacccttcggatgag
gagggggcaggaagcagtttgcggggtggaggcaacaacagcgagccctcggagaccctc
agcagcctctcgctgacctcccttttctcgcccccgccgccagggctgacgctggggaag
aagtgcagcagcaccagcagcctccacgccagcccttcgctccgccgtcctgctgcccac
cacaccaagcccttctacaccgttgaccccaagggcttcctctccatgccctcctgggtg
acggacttctgcaaggacacccctccacaagtgcaaggagcagagcccgacggccccagc
agactggggacaggggaatgcggctccctgctgccgtccgagctgggcgatggggtcagc
aagaggaacagatga
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