Lagopus muta (rock ptarmigan): 125685677
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Entry
125685677 CDS
T09141
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125685677 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125685677 (VPS45)
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125685677 (VPS45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
125685677
NCBI-ProteinID:
XP_048784913
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All DBs
Position
29:2272443..2299491
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AA seq
570 aa
AA seq
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MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETPGAVSMVYTQSEILQKEVYLFERIDSPGR
EPMKHLKAVCFLRPTKENVHCLIQELRRPKYSIYYIYFSNVISKSDIKALAEADEQEVVA
EIQEFYGDYIAVNPHVFSLNLLGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRVDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERSLLEVSEVEQELACH
SDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMADLKNRGVSERYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRTNPGVRVVLGGTTIHNT
RSFLEEVTASGFRGRSTEGSHAAPRPSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgttctcgccgtgaagcagtacgtgtcgaaaatgatcgaggacagcgggccg
ggcatgaaggtgctcctgatggaccgggagacgcccggcgcggtcagcatggtgtacacg
cagtccgagatcctgcagaaggaggtttacctcttcgagcgcatcgactcccccggcagg
gagcccatgaagcacctgaaggccgtctgcttcctgcggcccaccaaggagaacgtgcac
tgcctcattcaggagctgcggaggccgaagtacagcatctattatatctatttcagtaat
gtgatcagtaagagtgatatcaaggcattagctgaggctgatgaacaggaagttgtggca
gaaattcaggagttctatggagattacattgcagtgaatccacacgttttttctctcaac
ctcttgggctgctgccagggtcgcaactgggatccagcccagctgtccaggacaactcaa
gggctgactgctctgcttctgtccctgaagaaatgccccatgattcgataccaactctct
tctgagccagcaaagaggcttgctgaatgtgtgaagcaagtaatcactaaagagtatgag
ctgtttgacttccgtcgcactgaggttcctcctttgctccttattctggaccgctcagac
gatgccatcacccccctgctgaaccagtggacgtaccaggctatggttcatgaattgctg
ggcatcaacaacaaccgcgttgacctctcgcgtgtgccgggcatcagtaaggatctccgg
gaggtggtcctgtctgctgagaacgacgagttctacgccaacaacatgtacctgaacttt
gcagagattggcagtaacatcaagaatcttatggaggatttccagaagaggaaacctaag
gagcagcagaagctggaatccatagcagatatgaaggcatttgtggagaactaccctcag
ttcaagaagatgtcaggcacggtgtcaaagcacgtgacggtggtaggagagctctcgcgg
ctggttggtgagcgcagcctgctggaggtgtctgaggtggagcaggagctggcctgtcac
agcgaccattccagcgccctccagaatgtgcggcgcctcctgcagaaccccaaggtgact
gagctcgatgctgcccggctggtgatgctctatgccctgcactacgagcggcacagcagc
aacagcctgccagggctgatggcagatctcaagaataggggtgtttctgagagataccga
aagctggtctctgctgttgtggaatatggagggaaacgggtccggggcagcgacctgttc
agtcccaaggatgctgtagccatcacaaaacagttcctcaaaggactgaagggtgttgag
aatgtgtatacacaacaccagcctctccttcaagaaacactggatcagctcatcaaagga
aaactgaaggacagccagtacccctacttgggtcccaacacgctccgtgacaggccccaa
gatattattgttttcatcattggaggggcgacttacgaggaagcactgactgtgtacaac
ctgaaccgcaccaacccgggcgtcagggtcgtcctcggcgggaccaccatccacaacacc
aggagcttcctcgaggaggttacagcttcaggtttccgcggccgaagcaccgagggctcc
catgctgcaccgaggccgagcagcaggcggtga
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