KEGG   Lagopus muta (rock ptarmigan): 125685683
Entry
125685683         CDS       T09141                                 
Symbol
SF3B4
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125685683 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmut03041]
    125685683 (SF3B4)
Spliceosome [BR:lmut03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125685683 (SF3B4)
 Complex B
    125685683 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    125685683 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 125685683
NCBI-ProteinID: XP_048784921
LinkDB
Position
29:complement(2392026..2397381)
AA seq 418 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTALGPGVTPPGLPPP
GSFPPPVPPPGAMPPGMPPAMPPPPMPPGAGAPGPPTGAAPTGGHPPHPHAFPPGGMHHP
GMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGLPPRGPHFGSPMGHP
GPMPHHGMRGPPPLMPPHGYSGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcggctgggcccatctcggagcggaaccaggatgcgactgtgtacgtggggggtttg
gacgagaaggtcagcgagccgctgctgtgggagctcttcctccaggcgggccccgtggtc
aacacccatatgcccaaggatcgagtcacaggccagcaccagggctatgggttcgtggag
ttcctcagcgaggaggacgcagattacgccattaaaatcatgaacatgatcaaattgtat
gggaagccgatccgagtgaacaaagcctcggctcacaacaagaacctggatgtgggggcc
aacatcttcattggcaacctggaccccgaaatcgacgagaagctgctgtacgacaccttc
agcgcctttggggtcatcttacagacacccaaaatcatgcgggatccagacacgggcaat
tccaagggttatgcctttatcaacttcgccagctttgatgcttctgacgctgctatcgag
gccatgaatggacaatacctctgcaacaggcccatcactgtctcctacgccttcaagaag
gattccaaaggcgagcggcacggctcagctgctgagaggctcctggccgctcagaatccg
ctctcccaggcagatcggccccaccagctgtttgccgatgctcctcctcctccatctgtc
cccacccctgtggtcactgctctgggacctggcgtcacccctccaggcctcccaccccca
ggatcatttcccccgccggtgccgcctcctggagcaatgcctcctggcatgcctcctgcc
atgccgcccccaccgatgccacctggagccggtgcccccggcccccccactggggctgca
cccaccggagggcacccgcctcacccgcacgccttcccaccaggaggaatgcaccaccca
ggaatgcctcccatgcaggtgcaccacggcccgcccgggatgggccagcatcacccagga
ccaccaggctctggaggccaacccccccctcggcccccacccggcatgccgcaccccggc
ccccctcccatgggtttgccacccagagggcctcattttggatcaccgatgggtcacccc
ggccccatgccgcaccacgggatgcgcggcccccctcccctgatgccaccccacggctac
agcggcccccctcgccccccgccctatggctatcagagagtccccctccccccccggccg
gctcagagaccccctggggtgcccccacgtggccccctgagaggccccctgccctga

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