Lagopus muta (rock ptarmigan): 125685744
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Entry
125685744 CDS
T09141
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125685744 (NCSTN)
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
HydF_dimer
IBD
Motif
Other DBs
NCBI-GeneID:
125685744
NCBI-ProteinID:
XP_048785041
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Position
29:552519..563652
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AA seq
720 aa
AA seq
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MAAMERAGRRRGLTAVVGSCWVSLQAWCGPLPALLLAVLVAGSCEGNSVERKIYIPLNKT
APCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLNWVLADGPHPPYMILLDGNLFNRKV
MQQLKGTSRVSGLAVSIAKPNPPQGFSPGLKCPNDGFGVYSKDYGPQYAHCNRTVWNPVG
SGLSYEDFDFPIFLLEDANETQVIKQCYQDHNVPTDGSGPEYPLCAMQLFSHMHAVTSTV
TCMRRNSIQNTFSINPETVCDPLLDYNVWSTLHPINSSEKVDPKKEFIMVATRIDSHSFF
WNIAPGAESAVSSFVTHLAAAEALHKASDVHLLQRNIMFTFFQGETFDYIGSSRMVYDME
KDKFPLRLENIHSFVELNQVALRNGSILWMHTDPVSRLNATVEPQIKNLLDILTNSSIGA
NVTFQEVGFSQSLPPSSFQRFLRARHIPGVVLTDHQASFQNRYYQSMYDTPENIRMQYPE
GLSPEETLEYVTDTAKSLAEVATVVARALYRLAGGANDTSAIQADPKTITQMLYGFLIKM
NNSWFQSIIKPDLKGILGDDVPQHYVAVSSPVNTTYLVQYVLANLTGTVVNLTKEECLNP
EKAPNAEKEMYDYAWVQGSLDPNSTSRVPYCVRSTVRLSKALSPAFELREWGSTEYSTWT
ESRWKEIRARIFLVASKELEIITLVVGIAILVFSLVATHFINAKADVLFSIPRDPGAVAY
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggagagagccgggaggaggcggggattgacggctgttgtagggagctgc
tgggtctcgctccaggcttggtgcgggccgctgccggcgctgcttctcgccgtgctggtg
gcgggttcctgcgaggggaattcggttgagaggaagatctacatccccctgaacaaaacg
gcgccgtgtgttcgtcttctgaatgctacacaccagattggctgccagtcctccatcagt
ggagacacaggggtgatacatgtggtcgagaaggaggaggacctaaactgggtgcttgct
gatggcccacacccaccctacatgatattactagatggaaatctcttcaacaggaaggta
atgcagcagctgaagggaacctcacgagtgtcaggccttgcagtgtctattgccaaacct
aaccctccccagggattttctcctggtttgaagtgccccaatgatgggtttggtgtctat
tccaaagactatggccctcagtatgcacactgcaataggactgtgtggaatccagtgggg
agtgggctttcatatgaggattttgacttccccatttttttacttgaagatgccaatgag
actcaagttattaagcagtgttaccaagaccataacgtccctactgatggatctggccct
gagtaccctctgtgtgccatgcagcttttttcccacatgcatgctgtcaccagcactgtt
acctgcatgagacgcaactccatccaaaacaccttcagcattaatccagagactgtatgc
gatcctctgcttgattacaatgtgtggagcaccttgcaccctattaattcatctgaaaaa
gttgatcctaagaaggagtttattatggttgctacacggattgacagccattccttcttc
tggaacattgcacctggggcagagagtgctgtctcctcttttgtgacccacttggctgct
gctgaagcccttcataaggcatcagatgttcatttgctgcaaaggaatataatgttcacc
ttcttccaaggggagacttttgattatattggcagttcacgaatggtgtacgatatggaa
aaagataaatttcctctccgtttggagaacatccattcttttgtggagttgaatcaggtg
gctctaaggaatggctccattttgtggatgcatacagaccccgtctctcgattgaatgca
actgttgagccccagattaaaaacctgctcgatattctgactaatagcagcataggagca
aatgtcactttccaggaagttggattttctcagtctcttcctccatcttcattccaacgc
ttccttcgagcccggcacattcctggcgttgtcctgaccgaccaccaggcttccttccag
aacagatactaccagagtatgtacgacactccagagaacatccggatgcaataccccgag
gggcttagccccgaggagaccctggagtatgttacagacacagccaagtctctggcagaa
gttgccacagtggtcgcccgtgctctctaccggcttgcagggggagccaacgacacctct
gctattcaggcagatccaaaaacgatcactcaaatgctctatgggtttctgattaaaatg
aacaattcctggtttcagtccatcattaaaccagacctgaaagggattctgggtgatgat
gttccccagcactacgttgctgtttccagccctgtgaacactacctaccttgtgcagtat
gttctggccaatctcacaggcactgttgttaacctcaccaaggaagagtgcttgaaccct
gaaaaagcacctaatgctgagaaagaaatgtatgactatgcctgggtgcagggttccctg
gaccctaattcaacatcacgagtcccctactgcgttcggtcaaccgttcgcctgagcaaa
gcactctctcctgcctttgagctgagggaatggggatctacagagtattccacatggaca
gagagtcgatggaaggagatccgtgccagaatatttctagtagccagcaaggagctagag
ataatcactttggttgtgggcattgccattctggtcttctctcttgtcgccacacatttt
atcaacgccaaagcagatgtactttttagcatccctcgggaccctggggctgtggcttac
tga
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