Lagopus muta (rock ptarmigan): 125685751
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Entry
125685751 CDS
T09141
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmut00535
]
125685751 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125685751 (BCAN)
04091 Lectins [BR:
lmut04091
]
125685751 (BCAN)
Proteoglycans [BR:
lmut00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
125685751 (BCAN)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125685751 (BCAN)
Lectins [BR:
lmut04091
]
C-Type lectins
Lecticans
125685751 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
EGF_TEN
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
125685751
NCBI-ProteinID:
XP_048785068
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All DBs
Position
29:800998..815232
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AA seq
940 aa
AA seq
DB search
MASVLPLLLLWAFAPTVVPEVLSPEDVTDDLKALQVSIPRHPALHAVLAGDVTIPCLITY
LAPLPTASTAGRRAVLGAPRVKWTFISEGREAEILVARGEKVKVSEDYRLRASLPVFHQR
YTDASLLLTELRPNDSGIYRCDVQHGIEDGHDILDLRVKGVVFHYRGGSTRYTYTFAEAQ
EACTAISASIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRN
YGVVDPEDMYDVYCYAEDVPGEIFLETAPDKFTLEEAVARCRAQGAVLASTGQLYAAWSA
GLDACNPGWLADGSVRYPIVTPRERCGGALPGVKTIFQFRNQTGFPDAQSRYDAYCFREG
TNSFPEAAGKYQAREPEGLQEIVTVAEKLEELQLPKAQVEIESQGAIYAVPFFKDVADAE
LEKPSLSPEDTRHPPVDTSSSSARGRHPSSAAPFPTAPAVPKAGIPHSCAVQPGSPSPAD
QDEATGTGGRCTEARQEPSRTEDGAALERPLGSVLGEDFGNTAAESLGRGQEPGEPMKPN
VQTVLVGTEGPSDALSPSVAAADIQEPSSSVGSRGAGGTSTPIHTVGAAEDPELSGDVTE
NPGASPLPPAPPQLQDDGEEQSGALWLSSPTAPGDGGTAPTTEVTPWHAELPSSSDALQT
PSTDRGMPAASSEEEEGEEEEEDEEERPMPSVATVEGFLAAVPGEPGGCIPNPCLNGGTC
IEDGTHPTCLCLPGYGGSSCERPLKRCSPSWDSFQGACYKHFSTRRSWEDAESQCRHFGG
HLATILTPEEQDFINEQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSG
ENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPTVSNALAFGKPKQRYEIGSITR
YHCRHGFAPRRSPIIRCREDGIWERPQLSCRPGLAQHSED
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagttctcccactgctgctgctctgggcgtttgcccccacggtggtcccggag
gtgctcagccctgaagatgtcacagatgacctcaaggccctgcaggtgtccatcccacgg
cacccagcccttcatgctgtgctggcaggggacgtcaccatcccctgcctcatcacctac
ctcgcacccctgcccactgccagcacggcgggacgccgagcagtgctgggagccccccgg
gtcaagtggaccttcatttctgaaggcagggaggcagagatcttggtagcacggggggaa
aaggtgaaggtgagtgaggactaccgcctccgtgcctccttgcctgtcttccatcagcgt
tacactgacgcctctctgctgctcaccgagctgcgccccaacgactcggggatctaccgc
tgcgacgtgcagcatggcatcgaggacggccacgacatcctcgacctcagagtcaaagga
gtggtgtttcactaccgtgggggttccacacgctacacctacacttttgccgaggcgcag
gaggcatgcactgccatcagtgccagcattgccacccctgagcagctgtatgctgcctat
ctgggaggctacgagcagtgtgatgctggctggatcgctgaccagaccgtcaggtacccc
atccacactccccgtgaggcgtgctacggagacatgaatggcttcccaggggtgaggaac
tacggtgtggtggacccggaggacatgtacgacgtgtactgttatgctgaggacgtgcca
ggggaaatatttttggagacggccccggacaagtttaccctggaggaggcggtggcgcgg
tgcagggcgcagggtgcggtgctggcgagcacaggacagctctacgcagcctggagtgca
gggttggatgcctgcaaccccggctggctggctgatggcagcgtccgctatcccatcgtc
accccgcgggagcgctgcggaggagccctgccgggtgtcaaaaccatcttccagtttcgc
aaccagacgggattccccgacgcacagagcagatacgatgcgtactgcttccgagaaggg
acaaactctttccctgaggctgcaggaaaatatcaagccagagagcccgagggcctccag
gagattgttacagtggcagaaaagctggaggagctgcagctgcccaaagcgcaagtggag
attgagtcgcaaggggctatatacgccgtccctttctttaaggacgtggctgatgctgag
ctggaaaagccaagcctgtcccccgaagacacccggcaccccccagtagatacctcctcg
tcctcagcacgaggacgtcacccatcctccgctgcccctttccccacagccccagctgtc
cccaaggcaggcatcccgcatagctgtgctgtacaaccaggcagcccgtcccctgcagac
caggacgaggcgacagggacaggtggaaggtgcacagaggccaggcaagagccatcccgc
acggaggatggagcagcgctggaacggccgctgggctctgtgctgggtgaggacttcggg
aacacagcagcagagagtctgggcagagggcaagagcctggagagcccatgaagccgaat
gtgcagacagtcctggtgggcacagaaggacccagtgacgccctgtccccatcggtggct
gcagcagatatccaagagccatcctcctccgtaggcagccgtggggctggggggaccagc
acccccatccacactgtgggggctgctgaggaccccgagctgtcaggagatgtgaccgaa
aaccctggggcatccccgctgccccctgcaccgccgcagctgcaggatgatggagaggag
cagtcgggggccctgtggctctcctcacccacagcaccaggggatgggggcacagccccg
acaacagaggtcaccccatggcacgcagagttgcccagcagcagcgatgcactgcaaacc
ccaagcactgatcgcgggatgcccgctgcatcttcagaagaggaggagggtgaggaagag
gaggaggatgaagaagagcgtccgatgccctctgttgcaaccgtggagggtttccttgca
gccgtccccggagaaccaggtggctgcatccccaacccctgcctgaacggagggacctgc
attgaggatggcacccatcccacctgcctctgcctgccaggttatggagggagcagctgc
gagagaccgttgaagaggtgcagccccagctgggacagcttccagggagcctgctacaag
cacttctccacccggaggagctgggaggacgccgagtcacagtgcagacattttgggggg
catctggccaccatcctgacccccgaggagcaggacttcatcaacgaacagtaccgcgag
taccaatggatcggcctcaacgaccgcaccatcgagggggacttccagtggtccgacggc
agccccctgctctacgaaaattggcacccggggcaacccgacagctactttctctccggt
gagaactgcgtggtcattgtgtggcacgacgggggacaatggagtgatgtcccctgcaat
taccacctctcctacacctgcaaaatggggctggtgcagtgcggaccccctcccaccgtc
agcaacgctctcgccttcggcaaaccaaagcagcgctatgagatcggctccatcactcgc
taccactgccgccacggcttcgccccgcgccgctcccccatcatccgctgccgtgaggat
gggatttgggaacggccccagctctcctgccgccccgggctggctcagcactccgaggac
tga
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