Lagopus muta (rock ptarmigan): 125685777
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Entry
125685777 CDS
T09141
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125685777 (NOP2)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
125685777 (NOP2)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125685777 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
BMT5-like
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
125685777
NCBI-ProteinID:
XP_048785129
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All DBs
Position
1:complement(77098808..77104453)
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AA seq
680 aa
AA seq
DB search
MGRKLDPSRKEKRGPGRKARKQRGAEVELARFLPPEAESGRKKLSSHARRRAAKRRLGVA
GRTAPGGGRRPVVKEQGDSQKEVSPIKAVGHAPQRQSGFKDDNAKWLTPAKGKKSLSKRT
SVELSSNGEVEEDSWEMEEEEEDGSSEELMDDYGASSSDEEELLPIEKAALKQKADRDLS
EDDSEEDEVAEETSRQKTGQKEKEDADLQLNVEIDEEFKLPTDEQIEKETAEPPDLHVIH
QRIKSNMEVLQDFGVKREEGRTRQEYLALLRRDMAAYYSYSDFLLKMLMDIFPLPELINF
LEANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPE
YLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAE
RLRSVVGNLHRLGVTNTVVSNCDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPAIKTNKD
EKDILRCAHLQKELLLSAIDSVNATSETGGYVVYCTCSITVEENEWVVDYALKKRNVRLV
ATGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKKFSNSIPKTQKDEEL
AAEAANPSTGPETVMEPQAKKKKLESSKIAQAQKKPQPALKNRRTLQGQRRPLKAVRLSP
HKSCAQVPNRKKHKVKQNGQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaagctggacccgagcaggaaagagaagcgcggccccgggcgcaaggcccgc
aagcagcggggagctgaggtggaactggcccgcttcctgccgcccgaggcggagagcggc
cggaagaagctgtccagccacgcgcggaggagggccgccaagagacgactgggggtggcg
gggcggacggcgccgggaggaggtcggcggcccgtggttaaagagcagggggattctcag
aaggaggttagtcccataaaggcagtgggacatgcccctcagcgccagtctggcttcaaa
gatgataacgcaaaatggctgaccccagccaaaggcaagaagagcctctccaagagaacc
agcgtggagttatccagcaatggcgaggtggaagaggacagctgggagatggaggaggag
gaagaggatgggagcagcgaggagttgatggatgactatggtgcctcatcttctgatgag
gaagaattgctgcccattgagaaagccgccctgaagcaaaaggctgacagagatctcagt
gaagatgatagtgaggaagatgaggtggccgaggagaccagcaggcagaaaacaggacag
aaggaaaaagaagatgcagatctgcagctcaacgtggagatagatgaagaattcaaattg
ccaactgatgaacagattgagaaagagactgctgagccaccagacctgcatgtcattcac
caacgcatcaagagcaacatggaggtgctgcaggactttggggtgaagcgggaagaagga
cgcacacgacaagagtaccttgcactgttgcgccgggatatggctgcttactactcctac
agtgacttcttgctcaagatgctcatggatatcttcccactccctgagctaatcaacttt
ctggaagccaacgaggttccccgtcccgtgaccattcgcaccaacacactcaagacgcga
cgacgggacctagcgcaggctctcatcaaccgtggtgtgaatctcgaccccttggggaag
tggtcaaaaactggacttgttatttatgactcctccgtgcccattggtgccacccctgaa
tacttggctggacactacatgctgcaaggagcttccagtctcctccctgttatggctctg
gctccacaggagaatgagcgcatcctggatatgtgctgtgccccgggtggcaaaaccagc
tacatagctcaacttatgaagaatacagggatgatcttggccaatgacagcaatgctgag
cggctgcgtagtgtggtggggaatttgcatcggctgggtgtcaccaatacagtagtgagt
aactgcgatggacgccagtttcccaaggtacttggagggtttgaccgtgtgttgcttgat
gctccctgtagcggaacaggtgtcatttctaaggatcctgctatcaaaaccaataaggat
gagaaagacatcctgcgctgcgctcacttgcagaaggagctgcttctcagtgctatagat
tcagtcaatgccacctcagagacggggggctatgttgtctactgcacgtgctccattaca
gtggaagagaatgagtgggttgtggattacgccctgaagaaacgcaatgttcgtttggtg
gccacaggactggactttggcaaggaaggcttcaccaggtttaaggaccgtcgtttccat
ccctctcttaagtctacacggcgtttctatccccacacccataatatggatgggttcttc
attgccaagttaaagaaattctctaattccatccccaagacgcagaaagacgaagagctt
gctgcagaagcagcaaatccgtccactggccctgagacagtcatggagccacaggcaaaa
aagaagaaacttgagtcgtcaaaaattgcccaagcacagaagaagccacagcctgctttg
aagaatagacgtactctgcagggtcagaggaggcccttgaaggctgtccggctttctccc
cataagtcctgtgctcaagtccctaacagaaagaagcataaggtgaaacagaatggacag
tga
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