Lagopus muta (rock ptarmigan): 125685831
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Entry
125685831 CDS
T09141
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125685831 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125685831 (SNX27)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
Others
125685831 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125685831 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
125685831
NCBI-ProteinID:
XP_048785223
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All DBs
Position
29:complement(1022839..1038572)
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AA seq
550 aa
AA seq
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MADEEGEGPPRSAAAPQRNGGDEGAPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSING
ELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTV
LSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQL
CSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVI
GESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVGMDS
ITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEALLND
NDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIFPHC
SCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYAR
GEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNQNCSTDTVCSKNIFQT
VRAQQRDAAT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggtgaagggccgccgcgctcggccgcggccccgcagcggaacggc
ggcgatgaaggagccccggggggaccgcgggtggtccgcatcgtgaaatccgaatccgga
tacggcttcaacgtgcggggtcaagtgagcgagggcgggcagctgcggagcatcaacggc
gagctgtacgcgccgctgcagcacgtcagcgccgtgctgggcgggggggcggccgaccgc
gccggggtccgcaaaggagaccgcatcctggaggtgaacggagtgaacgttgaaggagca
acacacaagcaggtggtggacctgatccgcgctggggagaaggagctgatcctgacggtg
ctgtcggtgcctccccacgaggccgacaacctcgaccccagcgacgactccctggggcag
tccttctacgactacacggagaagcaggccgtgcccatctccatccccacctacaagcac
gtggagcagaatggagagaagtttgtggtgtacaacgtttacatggctggccggcagctc
tgctccaagcggtaccgtgagtttgccatcctgcaccagaacctgaagcgggaatttgcc
aatttcaccttcccacgtctccctggaaagtggcccttctccctgtcggaacagcagctg
gacgcccggcggcgagggctggaggagtacctggagaaagtgtgctccatccgcgtcatt
ggggagagcgacatcatgcaggagttcctgtcggagtcggatgagaattacaacggcgtc
tcagacgtggagcttcgggtagcattaccagacataacaacagtgacagtcagagtcaaa
aagaacagcactacagaccaggtgtaccaggccgtggctgctaaagttggaatggacagc
attaccgccaactactttgccttgtttgaagtgatcaatcactccttcgtgcgcaagctg
gcacccaatgaatttccccacaaactctacgtgcagaactacacctcggcggtgccgggg
acatgcctgaccatccggaaatggctcttcacgacagaggaggaggctcttctcaatgac
aacgacttggcagtcacctacttcttccatcaggctgttgatgatgtcaagaaaggctac
atcaaagcagaggagaagtcctaccagctacagaagctctgtgagcagagaaagatggtc
atgtatttgaacatgttgcggacgtgcgagggttacaacgagatcatcttccctcattgc
tcctgtgactctcggcggaagggacatgtcatcacagccatcagtattaagcactttaaa
ctccacgcctgcaccgaggagggacagctggagaaccaggtaatagcgttcgaatgggac
gaaatgcagcggtgggacacggacgaagagggaatggccttttgttttgagtatgcccga
ggagagaagaaaccccgatgggttaaaatcttcaccccctacttcaactacatgcatgag
tgcttcgagcgggttttctgtgagctcaagtggaggaaagaggtggaggaggaggcaaca
gacaaggataaccagaactgcagcacagacacggtgtgcagcaagaacatcttccagacg
gtgcgggcacagcagagggacgcagccacttaa
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