Lagopus muta (rock ptarmigan): 125685914
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Entry
125685914 CDS
T09141
Symbol
NES
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125685914 (NES)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
125685914 (NES)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ERM_helical
ATG16
APG6_N
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
125685914
NCBI-ProteinID:
XP_048785343
LinkDB
All DBs
Position
29:complement(790274..797956)
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AA seq
1706 aa
AA seq
DB search
MLSMEGFVGARALGEESLQMWDLNKRLEAYLARVKYLEEENEGLRAEIQSTKESPAGDPR
RARYEEELRSLRDALHRAFTEKCAAELARDNLYEEVQHVRSRCQKEQAAREEAKRQLSSS
KKELEEERRAQIWLKERAVQLEKEVESLLEVHEEEKAGLDQELASFSQSLEGFRCAPVAF
QPVEVEDYSKRLSEIWRGAVETYKAEVAQLERALGQAKENLWQVAEDNQQSQLQLRHLEK
ELVGLKVRKEMLEESLGQQWQEQHGEAEKFQLAIEALEQEKQSLQVQIAQVLEDRQQLMH
LKMSLSLEVATYRTLLEAESTRLQMPPGEFKLANSLRDVKLEVSSSKHRASLAAFPRPEG
VAQLCRTPGDALKALTPKNKSSSAQEFQKINSVLQAPRSWEPAAPSHAVPVLSPVPGSGG
AESPAHECGAGEESPMQSPLSPEQLVSHALQDALKEMQDDAEAKEVPKFSATQSTRDGDL
EDPMEEEAAGTQEMGVEGGTVSPPGLRLCSNVPTLLSATQSDAESREEKWEEERSKEEEM
LNPLSSTESQEPGGEPWGGDTKGSRLEVGKEDMEATSMEALHVLEYKEQREPWSPSREDE
ECEFPDQEREMQEEGSLQTEIEAACAVPVGSHPVLPAGIHLQEDFVETELKSEHQEMSLR
ELGAAAGDEREQEVCLEMSASSIEGAMPAAEGSSESGEDTTGRESTGRAQDDEGEEEDKG
REALGGEDPQAGEALGAKEIRQESMGLEEAEGMWEESVDMWEEHRDPQEGHGDLQEEKED
LGEEHRDLQEEHGDLQEEYRDLQEEHGDLQEEHGDTQEEHGDLQEEYRDLQEEHGDTQEE
HGDTQEEHGDLQEEYRDLQEEHGDLQEEYRDLQEEHGDTQEEHGDLQEEYRDLQEEHGDL
QEEYRDLQEEHGDTQEEHGDLQEEYRDLQEKHGDTQEEHGDTQEEHGDLQEEYRDLQEEH
GDLQEEQGDTQDEHGDTQEEHGDLKEEFRDLQEEHGDLQEEYRDLQEEHGDTQEEHGDLQ
VEHGDTHEEHGDLQVEHRDTQEEHGDLQKEYGDTQEEHRDLQKEHRDLQQEHGDLWEEHE
VLKEEQEDLQEEHRDLQEGSGDPQEEPGEPWVQCEEQGSAEDGLEQEMVLQPGEGAQGRE
ENDIDQKQQAQDWEETAEDEEETEVNAVTSQEPAQVDDNTHAEAAEDEEGDVTSPTATEE
AQEGEDDRDAGSEVKSQQQPQGIVGQEAEPAPGQEEIRYGDTGEAPGDPQEPAEALEVQD
EELSSEPIERGSPDTAVLQQDLGSGVESDEPMKEDIQSEDAQLDEPKPCRMELEDTLLNS
TPLCAHSGEVLESDPNPPSSGGDGETEPEMALEEEGELRGSDEAAVHAEPESCEESGMEL
SSAPECTEEEEGYFIVSAPNQEESSIEEAENSEEFEEIKVEAEEDRKDELTVPAEASPVL
EDEGHLEPLGGEAEDVKMPTGELEIPKEEDEEDAGRLAAELEEGLAVSVDEGLSEGRTDK
TILGDEGLGEEDVQDSDNSPAPETSNTDPSNVDPPPGTMLEHGSGMEAAQYLPDVPTQMP
VDIMKDSDILEIVEQALEFNQELVMGAKLAKDGEGDGDTQLPQEEEGGSSPTSSSDEQPT
VQEAVAEPERTKNGEQNGLHRQASLEDLAEFTEEGLNGITHPEEAPAAHTLPLPSKHSGA
EPVPPLSPLQDQVLHPEQEPWSSGEE
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcatggagggcttcgtgggggcgagagctctgggtgaggaatcgctgcagatg
tgggacctcaacaagcgcctggaggcctacctggcccgcgttaagtacctggaggaggag
aatgaggggctgcgagctgagattcagagcaccaaggagagccctgccggggacccacgc
agagccaggtacgaggaggagctgcggtcgctgcgggatgcgctgcatcgcgccttcacc
gagaagtgtgcggccgagctggccagggacaacctgtatgaggaggtgcagcatgtgagg
agcaggtgccagaaggagcaggcagcccgcgaggaagccaagaggcagctgtcctccagc
aagaaagagctggaggaggagagacgggcgcagatctggctgaaggagagagctgtgcag
ctggagaaggaggtggaatctctgctggaggtgcacgaggaggagaaagcggggctggac
caggagctcgccagcttctctcagagcctggagggcttccgttgtgctccggtggcattc
cagcctgtggaggtggaggactactccaagagactgtcagagatctggagaggggcggtg
gagacctacaaggcagaggtggcgcagctggagcgtgcacttggccaagccaaggagaac
ctctggcaggtggcagaagacaaccaacagagtcaactgcagctgcggcacctggaaaag
gagctggtggggctgaaggtgcggaaggagatgctggaggagagcctgggccagcagtgg
caggagcagcatggagaggctgagaagttccagctggccatcgaggccctggagcaggag
aagcagagcctgcaggtgcaaatcgcccaggtgctggaggacaggcagcagctcatgcac
ctcaagatgtccctcagcctggaggtggcaacctacaggacactgctggaagcagagagc
acccggctgcagatgcctcccggggagttcaagctggccaacagccttagagatgtcaag
ctggaggtgagcagcagcaagcaccgtgccagccttgctgccttcccccggcccgagggg
gtggcacagctgtgcagaacccccggtgatgccctcaaggcgctgactcccaaaaacaag
agctccagtgcacaggagttccagaaaatcaactcagtcctgcaggcaccgaggagctgg
gagcctgctgcccccagccacgctgtcccagtgctgtcccctgtgccaggcagtgggggg
gcagagagcccagcccatgagtgtggggctggtgaggagtcccccatgcagagcccactg
agtcctgaacagctggtcagccacgcactgcaggatgctctcaaggagatgcaagatgac
gctgaggccaaagaagtgcccaaattcagtgctacccagagtaccagggatggggatctt
gaagaccccatggaggaggaggctgcaggaacccaggagatgggtgttgagggtggcacc
gtgtccccacctgggctgcgtctctgcagcaacgtgcccacattgctaagtgccacccag
agtgatgcggagagccgggaggagaagtgggaggaggagaggagtaaagaggaggagatg
ttgaacccactgagctccacggagagccaggagccagggggagagccctggggaggagac
acaaaggggtccaggctggaagtgggcaaggaggacatggaggccaccagcatggaggct
ctgcatgtcttggagtacaaggagcaaagggaaccctggagcccttccagagaggatgag
gaatgtgagttcccagatcaggagagggaaatgcaagaagaaggatccctgcagacagaa
atcgaagctgcttgtgctgtccctgtggggagccacccagttttgcctgcgggaatccac
ttgcaagaggactttgttgagacagagctgaagtctgagcaccaggagatgtccctgcgt
gagctgggtgctgctgcaggggacgaaagggagcaggaggtgtgcctggagatgagcgcc
tctagcattgaaggggccatgccagcagcagagggctcatcagagtctggagaagacact
acaggaagggagagcacaggcagagcacaggatgatgagggagaggaggaagataaagga
agggaggcattagggggagaagacccccaggcaggggaggctttgggagccaaagagata
aggcaggagagcatgggcttggaggaggctgaaggcatgtgggaggaatctgtggacatg
tgggaagaacatagagacccccaggagggacatggggacctgcaggaggagaaggaggac
ctgggggaggaacacagggacctacaggaggagcatggggacctgcaggaggagtacagg
gacctacaggaggagcatggggacctgcaggaggaacatggggacacccaggaggagcat
ggggacctgcaggaggaatacagggacctgcaggaggagcatggggacacccaggaggag
catggggacacccaggaggagcatggggacctgcaggaggagtacagggacctacaggag
gagcatggggacctgcaggaggaatacagggacctgcaggaggaacatggggacacccag
gaggagcatggggacctgcaggaggagtacagggacctacaggaggagcatggggacctg
caggaggaatacagggacctgcaggaggaacatggggacacccaggaggagcatggggac
ctgcaggaggaatacagggacctgcaggagaagcatggggacacccaggaggagcatggg
gacacccaggaggagcatggggacctgcaggaggagtacagggacctgcaggaggaacat
ggggacctgcaggaggaacagggggacacccaagatgagcatggggacacccaggaggag
catggggacctgaaggaggaattcagggacctgcaggaggagcatggggacctgcaggag
gagtacagggacctgcaggaggagcatggggacacccaggaggagcatggggacctgcag
gtggagcatggggacacccatgaggagcatggggacctgcaggtggagcacagggacacc
caggaggagcatggggacctgcagaaagagtatggggacacccaggaggaacacagggac
ctgcagaaggaacatagggatctgcagcaggagcatggggacttgtgggaggaacatgag
gtcttgaaggaagaacaggaggacctgcaggaggaacatagggatctgcaggaggggtct
ggagaccctcaggaggaacctggggaaccttgggtgcagtgtgaggagcagggctctgca
gaggatgggctggagcaggagatggtgctgcagccaggagagggggcacagggcagggaa
gaaaatgacattgaccaaaagcagcaagcacaggactgggaagagacagcggaggatgaa
gaggagacagaagtcaatgctgtcacatcccaagagccagcccaggtggatgacaacaca
cacgcagaggcagcagaagatgaggagggagatgtcacatcaccaacagcaacggaggaa
gctcaggagggtgaggatgacagagatgctgggagcgaggtgaaaagccagcagcagcca
cagggcatagtaggacaggaggctgagccagccccagggcaagaggaaatcaggtatggg
gacactggggaggcaccaggggacccacaggagccagctgaggcgctggaggtgcaggat
gaggagcttagctcggagcccattgagagaggcagcccagacactgcagtgctgcagcag
gatctgggcagtggggtagagagtgatgagcccatgaaggaggacattcagtcagaggat
gctcagttggatgagcccaagccatgcaggatggaattagaagacacgctgctcaacagc
acgccgctatgtgcacacagcggggaggtgctggagtctgatccaaaccctccatccagt
ggaggggatggggaaacagaacctgaaatggctctggaggaggaaggggagctgagaggg
agtgatgaggcagcggttcatgcagagccagagagctgtgaggagtcagggatggagctg
agctctgcgccagaatgcaccgaggaggaggaagggtacttcatagtttctgctcccaac
caagaggagtccagcatcgaggaagctgagaactcagaggaatttgaagaaattaaagtt
gaagcagaagaagacagaaaggatgaactaacagtgcctgcagaagcctctccggtgcta
gaggatgaagggcacttggagccacttgggggggaagctgaagatgtgaaaatgcccacg
ggagaactggagataccaaaggaggaggatgaggaggatgcagggcgtttggctgctgag
ctggaggaaggactggctgtgtccgtggatgaggggctgtctgaggggcgcactgataag
accatcctgggtgatgagggcctgggggaggaggacgtgcaggatagtgacaactcccca
gcccctgagacctccaacactgacccctccaacgttgacccacccccaggcaccatgctg
gagcacggatctggcatggaggcagctcaatatctccccgatgtgcccacacagatgcca
gtggacatcatgaaggactcggatatcctggaaatagtggagcaggccctggagttcaat
caggagctggtaatgggagccaagctagccaaggatggggagggggatggtgacacacag
ctcccacaggaggaggaaggggggtcctcacccacttcatccagtgatgaacagccaacg
gtgcaggaggcggtggcagaaccggagcgcaccaagaacggggagcagaacgggctgcac
cggcaggccagcctggaggacctggctgaattcactgaggaagggctgaatggcatcacc
caccctgaggaagcccctgctgcccacactctgcccttgcccagcaagcacagtggggct
gagcctgtccctccgctgtctccgctgcaggaccaagtcctgcacccagagcaggagccc
tggtcctctggggaggagtga
DBGET
integrated database retrieval system
