KEGG   Lagopus muta (rock ptarmigan): 125685953
Entry
125685953         CDS       T09141                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03020  RNA polymerase
lmut03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125685953 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125685953 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125685953 (POLR2I)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125685953 (POLR2I)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125685953 (POLR2I)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125685953 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 DUF3716 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 125685953
NCBI-ProteinID: XP_048785452
LinkDB
Position
30:1515675..1517620
AA seq 145 aa
MLFVPAEPPWSVAVRVCRLDMESEGPSEPGFVGIRFCQECNNMLYPKEDKESRVLLYACR
NCDYQQEADSSCIYVNKITHEVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSH
SARAEDAMRLYYVCTAPHCGHRWTE
NT seq 438 nt   +upstreamnt  +downstreamnt
atgctttttgtccccgcggagccgccgtggtcggtcgctgtgcgcgtgtgcagactcgac
atggagtcggagggtccctctgagccgggtttcgtcgggatccgcttctgccaggagtgc
aacaacatgctgtaccccaaggaggacaaggagagccgtgtgctgctttacgcgtgccgc
aactgcgactaccagcaggaggccgacagcagctgcatctacgtcaacaagatcacgcat
gaagtggatgagctcacgcagatcatcgctgatgtctcccaggaccctacgctgccgcgc
actgaggaccatccctgccagaagtgtgggcacaaggaagctgttttcttccagtcgcac
agtgcaagagctgaggatgccatgaggctctactatgtctgcacagccccgcactgtggc
caccgctggaccgagtga

DBGET integrated database retrieval system