Lagopus muta (rock ptarmigan): 125686221
Help
Entry
125686221 CDS
T09141
Name
(RefSeq) tRNA nuclease CdiA-2-like isoform X1
Organism
lmut
Lagopus muta (rock ptarmigan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
HVO_2753_ZBP
zf-Di19
zf-met
Motif
Other DBs
NCBI-GeneID:
125686221
NCBI-ProteinID:
XP_048785925
LinkDB
All DBs
Position
33:complement(514772..520845)
Genome browser
AA seq
1139 aa
AA seq
DB search
MDPWRHQNPTPPSPKPNTSSPKPTATTSASPKPTTANGPTPSPKPTATTRSMASPKPTTP
SPKPPATATNGSMASPKPNTPSPKPPATATNGSMVSPKPTTPSPKPPTTATNGSMVSPKP
NTPSPKPNTPSPKPNATHGSTTPPNPTTASPNPTTTSPNPTSTPPNPTTASPSPTAGPTS
PPPNPNLSSPYQCADCHRTFRRAKELATHRRAHTGLSPFQCPHCGKTFTWSSHWERHRRT
HTGERPYRCAECGKSFGRSSHLYRHQRGHADGRSYICTYCGRSFGSITHFERHQKTHVGR
RPYKCTRCRKSFGDAPALVRHQRGHLAEGSSASAVRSWGGRGVGGKGRRCGDCGTVFSWS
SHWEWHWCGDGGDGGGGGRGGSAVGTGGVCSGGISSGGTSMASGGVSNDGVSSGRTSVAN
GGVSHGGVSMTHGGISSGGICSGRTSVAHGGTSVASGGVSMTDGGVSDGGVSIANGRTSV
ANGRTSISKGGISSGRTSVASGGVSNGGVSMTHGGISNGGDSNGGICSGRTSVASGGTSV
ASGGVSHGGISSGRTSVANGGVSISNGGSSNGGISNGGTSMASGGVPNGGISSGRTSVAN
GRTSMASGGVSISNGGVSNGGTSMASGGVSKSGISSGRTTVANGGVSVTDGGISNGGSSI
SSGRTSMANGGTSVANGGISIPKNGTSVANGGISNGGTSMASGRTFIPKNGASITNVGIS
VANGGTSITKNGTSVANGGISDGGTSITKGSSSVAKDGPSVTPDGVAITSGGASIANGGI
SIADSPVGLTTDLPNAAKPGRCASCGKSFSCSSHWERHRCTNVTAIASGGASIANGGASI
TNSGASIANGGASIARDPAGITNDPIGLTNDPMDINTNPIGLTTVPMDITNDPIGVTTNP
TGLTNDPMDINTNPVDLTSDPIGITNDPMDINTNPIGLTNNPMDITNNPIGITNNPIGLT
NNPIGLTNDPIGLTNNPIGLTNNPIGITNNPIGLTTDPMDLTTDPMDITTDPIGLTSDPI
GLTTDPIGLSTDVPSAAKPYRCADCGKSFSWSSHWERHQRIHTGERPYRCGDCGKSFGRT
SHLYRHQRSHQGGRPHICGVCGRSFNSTLHFLRHQKGHRQKPAKPRRRAAVMAEGPEEE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggatccatggcgtcaccaaaacccaacacccccgtcaccaaaacccaacacctcgtca
ccaaaacccaccgccaccacatcagcatcaccaaaacccaccactgccaatggacccacg
ccgtcaccaaaaccaaccgccaccaccagatccatggcgtcaccaaaacccaccacccca
tcaccaaaaccacccgccaccgccaccaatgggtccatggcgtcaccaaaacccaatacc
ccgtcaccaaaaccacccgccaccgccaccaatgggtccatggtgtcaccaaaacccacc
accccgtcaccaaaaccacccaccaccgccaccaatgggtccatggtgtcaccaaaaccc
aacaccccatcaccaaaacccaacaccccgtcaccaaaacccaacgccacccatggatct
accacgccaccaaaccccaccaccgcatcaccaaaccccaccaccacgtcaccaaacccc
acctccacgccaccaaaccccaccaccgcgtcaccaagccccaccgccggccccacgtcg
ccgccaccaaaccccaacctctcctctccttaccaatgtgccgattgccaccggaccttc
cgccgcgccaaagaattggccactcaccgccgggctcacaccggcctttcaccgttccaa
tgtccccactgtggcaaaaccttcacctggagctcccattgggaaagacaccgacggacc
cacaccggcgagcggccttaccgatgcgccgaatgcggcaaaagcttcggtagaagctcc
cacctttaccggcaccaacgtggccacgccgacggtcgttcttacatctgtacctattgc
gggagaagttttggtagcatcactcatttcgagaggcatcaaaaaactcacgtcgggagg
aggccctataaatgcacgaggtgccggaagagtttcggcgacgcgccagcgttggttcgg
catcaacggggacatttggcggaagggtcgtcggcatcggcggtgcggtcgtggggtggc
cgtggggtggggggaaaagggaggaggtgtggggattgcgggacggtgttctcgtggagc
tcccactgggaatggcactggtgtggggatgggggagatggtggcggtgggggcagaggt
ggcagcgccgtgggcaccggtggggtctgcagtggtgggatctccagcggtggaacctcc
atggccagtggtggggtctccaatgatggggtctccagtggtagaacctccgtggccaat
ggtggggtctcccatggtggggtgtccatgacccatggtgggatctccagtggtgggatc
tgcagtggtagaacctccgtggcccatggtggaacctccgtggccagtggtggggtctcc
atgactgatggtggggtctccgatggtggggtgtccatcgccaatggtagaacctccgtg
gccaatggtagaacttccatctccaaaggtgggatctccagtggtagaacctccgtggcc
agtggtggggtctccaatggtggggtgtccatgacccatggtgggatctccaatggtggg
gactccaatggtgggatctgcagtggtagaacctccgtggccagtggtggaacctccgtg
gccagtggtggggtctcccatggtgggatctccagtggtaggacctccgtggccaatggt
ggggtctccatctccaatggtggaagctccaatggtgggatctccaatggtggaacttcc
atggccagtggtggggtccccaatggtgggatctccagtggtagaacctccgtggccaat
ggaagaacctccatggccagtggtggggtctccatctccaatggtggggtctccaatggt
ggaacttccatggccagtggtggggtctccaaaagtgggatctccagtggtagaaccacc
gtggccaatggtggggtctccgtgactgatggtggaatctccaatggtggaagctccatc
tccagtggtagaacctccatggccaatggtggaacctccgtggccaatggtgggatctcc
atccccaaaaatgggacctctgtggccaatggtgggatctccaacggtgggacctccatg
gccagtggcaggaccttcatccccaaaaatggggcctccatcaccaacgttgggatctcc
gtggccaacggtgggacctccatcaccaaaaatgggacctccgtggccaatggtgggatc
tctgatggtgggacctccatcaccaagggcagcagttccgtcgccaaagatgggccctcc
gtcacccctgatggggtcgccatcaccagcggtggggcctccatcgccaatggtgggatc
tccatcgctgacagccccgtaggcctcaccaccgacctccccaacgccgccaaacccggc
cgctgtgccagctgtggcaaatccttctcttgtagctcacactgggaacggcaccggtgc
accaacgtcaccgccatcgccagtggtggggcctccatcgccaacggtggggcctccatc
accaacagtggggcctccatcgccaatggtggggcctccatcgccagagaccccgccggc
atcaccaatgaccccataggcctcaccaacgaccccatggacatcaacaccaaccccata
ggcctcaccaccgtccccatggacatcaccaacgaccccattggtgtcaccaccaacccc
acgggcctcaccaacgaccccatggatatcaacaccaaccctgtagacctcaccagcgac
cccataggcatcaccaacgaccccatggacatcaacaccaaccccataggcctcaccaac
aaccccatggacatcaccaacaaccccataggcatcaccaacaaccccataggcctcacc
aacaaccccataggcctcaccaatgaccccataggcctcaccaacaaccccataggcctc
accaataaccccataggcatcaccaacaaccctataggcctcaccaccgaccccatggac
ctcaccaccgaccccatggacatcaccaccgaccccataggcctcaccagcgaccccata
ggcctcaccaccgaccccataggcctcagcaccgacgtccccagcgccgccaaaccctac
cgctgtgccgactgtggcaagtccttctcttggagctcccattgggaacggcaccaacgc
atccacaccggcgagcggccgtaccgatgcggcgactgcggcaaaagcttcggccgtacg
tctcacctctacaggcaccagcggagccaccaagggggtcggccccatatttgtggggtc
tgcgggaggagctttaacagcacccttcatttcctaaggcaccaaaaggggcaccggcag
aagccggcgaagccgcgacggcgagcggcggtgatggcggaggggccggaggaggagtga
DBGET
integrated database retrieval system
