Lagopus muta (rock ptarmigan): 125686234
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Entry
125686234 CDS
T09141
Name
(RefSeq) tapasin isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125686234
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
C1-set
V-set
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
125686234
NCBI-ProteinID:
XP_048785958
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Position
33:671021..676137
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AA seq
764 aa
AA seq
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MAAGLRLLLAGFFWSQYRVEVAASPPPPPAPVRCALLEKEGRRGGLPGGGKARPALLRFE
GDAETPPEPGPKPEVTFSVSDPWGALTPLGVPPRAPPSCELNPTNPQTVSAPWSRPLHPD
ARSPPTAGGQWWLAAVGTPQYSATALLQGGAGTEVTIAAAGKGVPRCPSLGVPMSLSVSQ
CVPMCPYNTHVSPCPLTFPCPPVSPCSLISPCPLTSPCPLNVSISPQYSHVPSPPHVPTV
SPCPLTFPHPPVSPSPLTSPCPQVSPYPLTSPCPPGSPCPLISPCPLISPHTPVSSCPSN
VPTSPQCPHVLLCPHVPSPPHIPQCPQIPSPLHVPKCPHIPSSPHVPQYPHVPQCPHGPS
HPYVPSMSPYPLSVPMSPYLLTSPSVPKSPHLSMSPSVPISPHLPMSPSVPMSPHLPTYS
SVLMSLQCPHVPSMSPYPLSIPMSPHLPMSPQCPHVPLPSHIPQFPQVPSPLHVPKCPHV
LLCPHVPSPPHVPAVSLAVLTNTPTLRVRVGSPTHLHCAFAAPPSPFVLEWRHQSRGAGR
ILLAYDSSTARAPHTTPGAELLLGTRGGDGVTEVTLRLVRPSPGDEGTYICAVFLPHGHT
QTVLQLDVFEPPKVTLSPKNLVVTPGTSAELQCHVSGFYPLDVTVTWQRRAGGSGPWRSP
GGTVMDSWTSGHRRAADGTYSRTAAARLIPARPQHHGDVYSCVVTHTALAKPMRVSVRLL
VAGTEGPHLEDITGLFLVAFILCGLIRWLYPTAARPEEETKKSQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggggctgcggctgctgctggcggggttcttctggtcccaatatagggtggaa
gtcgccgcctcccctccgcccccccccgctccagtgcgttgcgcgctgctggagaaggag
gggcgcaggggggggctgccgggggggggaaaggcccgtcctgcactgctgcgctttgag
ggggacgcggagacccctcccgaacccggcccgaagcccgaagtcaccttcagtgtcagc
gacccctggggggctctaaccccactcggggtcccccctcgggctccccccagctgcgaa
ctgaaccccacgaacccccagaccgtctctgccccatggagccgccctctgcaccctgac
gcccgcagccccccaaccgcgggggggcagtggtggttggcggcggtggggaccccccag
tacagcgccactgcgctgctgcaggggggggcgggcacagaagtaaccatcgctgctgcc
ggtaagggggtgcctcggtgtccctccctgggtgttcccatgtccctatccgtctctcag
tgcgtccccatgtgtccctataacacccatgtgtccccatgtcccctcaccttcccatgt
cccccagtatccccatgttccctaatatccccatgtcccctcacatccccatgtcccctc
aatgtctccatatcccctcagtattcccatgtcccctcacctccccatgtccccacagtg
tccccatgtccccttaccttcccacatcccccagtgtccccaagtcccctcacctctcca
tgtccccaagtgtccccatatcccctcacctccccatgtcccccagggtccccatgtccc
ctcatctccccatgtcccctcatctccccacatactccagtgtcctcatgtccctccaat
gtccccacgtcccctcagtgtccccatgtcctcctgtgtccccatgtcccctcacctcct
cacatcccccaatgtccccaaatcccctcacctctccatgtccccaagtgtccccatatc
ccctcatctccccatgtcccccagtatccccatgttccccaatgtccccatggcccttca
catccctatgtcccctcaatgtctccatatcccctcagtgtccccatgtccccttacctc
ctcacatcccccagtgtccccaaatcccctcacctctccatgtccccaagtgtccccata
tcccctcatctccccatgtcccccagtgtccccatgtcccctcatctccccacatactcc
agtgtcctcatgtccctccaatgtccccatgtcccctcaatgtctccatatcccctcagt
atccccatgtcccctcacctccccatgtccccacagtgtccccatgtccccttaccttcc
cacatcccccagtttccccaagtcccctcacctctccatgtccccaagtgtccccatgtc
ctcctgtgtccccatgtcccctcacctccccatgtccccgcagtgtccctggcggtgctc
accaacaccccaacactccgggtccgtgtggggtcccccacccacctgcactgcgccttt
gccgcccccccgtccccctttgtcctcgaatggcgtcaccagagcaggggtgcgggtcgg
atccttctggcctatgacagttccaccgcccgcgccccccacaccacccccggggccgaa
ctgctgctggggacacggggtggggacggggtgacggaggtgacgctgcgcctggtgagg
ccatcaccaggggatgagggcacctacatctgcgccgtgttcctgccccatgggcacacg
cagacggtgctgcagctcgacgtctttgagccccccaaggtgacgctgtccccaaagaac
ctggtggtgaccccagggacatcagcagagctgcagtgccatgtgtctggcttctacccc
ttggatgtgacagtgacgtggcagcgccgcgcggggggctcggggccatggcgatcgccg
gggggcacagtgatggacagctggacatcgggccaccgccgggctgctgatggaacctac
agccggacggcggcagcacggctgatccccgcacgtccccaacaccatggggacgtctac
agctgcgtcgtcacccacactgcactggccaaaccaatgcgcgtctccgtccgactgctc
gtggctggcactgaggggccacacctggaggacatcacggggctcttcttggtggctttt
atcctctgcggcctcatccgttggctctaccctacagctgcacgacccgaagaggaaacc
aagaaatcacagtga
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