Lagopus muta (rock ptarmigan): 125686257
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Entry
125686257 CDS
T09141
Symbol
TNXB
Name
(RefSeq) tenascin-X isoform X1
KO
K06252
tenascin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125686257 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125686257 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125686257 (TNXB)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125686257 (TNXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
125686257
NCBI-ProteinID:
XP_048786004
LinkDB
All DBs
Position
33:complement(733388..760178)
Genome browser
AA seq
2306 aa
AA seq
DB search
MTPGLPLLLLALALRRAQGNAGTSPGPPPVPPELSCGAEVLEAVLGRLRALEGEVRALQG
QCGDSLGPQAGTGSTAARRLCDTPGAGGCCGCRMGEAGDGLPCPAPRCPFDCSDQGRCRA
GRCHCFEGFTGPFCATPICPSGRGGPHCSLEIPSVTLRLAARNQTSFRVTWPRPAKPVDG
YEVAVIPMDEPAALTTHELPSSAVTFEVTGLTPGQAFEIFIQAQREQHLGAPGTLRVRTL
LAQSLPNQGGLRGTPTFLASPVAPASPSARGSPASPRSPVSLGSLGSPASSTSPRSPASL
RSPVSPESSAAPTSLESPLSPESPVSPRSPTSQWSPASPQSPLSPASPVSPVLPNVPSLH
ELGVKLSSYNGSLLQRLESHLRATDFPLRGNQTVPAVARAILSYLLRRSPALLRHQFLRH
LQQNPHPKPQVLPGAAGEALVDLDGLRGHAETIVIRYQLLEEPEGDEGEMRVPGDTTVAR
VPGLVPGATYRVEVHGVVRGRVSKSYTSLVTAGLGDTSEPPSEWKNLYEMEGTEPQGAMA
KAAPSEEEPTQQPHLGMLTVSHVTPSSIQLEWSVLEGTFDSFTVQYRDAQGQPQALAVDG
GSRTVTVHGLSPSRRYKFNLYGVWGRKRIGFISTDAVTASAKPKEESPSPPRLGEVTASH
VSPNSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVHGLSPSRRYKFNLYG
VWGRKRLGPISTDAVTAPAAEEPPSPPRLGEVTASHVSPDSVQLEWSVPEGSFDSFTVQY
KDAQGQPQVVPVDGGSRSVSVPGLSPSRRYKFNLYGVWGRKRLGPISTDAVTAAEEVEEQ
PPPQPRLGELTASHVSPNSVQLEWSVPEGTFDSFTVQYVDVQGQPQELHLDSGSRTVTVP
GLLPSHPYKFNLYGLWGQTRLGPISTDTITAAAPAAEETPSPPRLGEVTASHVSPDSVQL
EWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVPGLSPSRRYKFNLYGVWGRKRLG
PISTDAVTAAAPAAEQPPSPPRLGEVTASHISPNSVQLEWSVPEGSFDSFTVQYKDAQGQ
PQVVPVDGGSRSVSVPGLSPSRRYKFNLYGVWGRKRLGPISTDAVTAPAAEEPPSPPRLG
EVTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVPGLSPSRRY
KFNLYGVWGRKRLGPISTDAVTAAEEVEEQPPPQPRLGELTASHVSPNSVQLEWSVPEGT
FDSFTVQYVDVQGQPQELHLDSGSRTVTVPGLLPSHPYKFNLYGLWGQTRLGPISTDTIT
AAAPAAEETPSPPRLGEVTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDG
GSRSVSVPGLSPSRRYKFNLYGVWGRKRLGPISTDAVTAAAPAAEQPPSPPRLGEVTASH
VSPNSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVHGLSPSRRYKFNLYG
VWGRKRLGPISTDAVTAAEEVEEQPPPQPRLGELTASHVSPNSVQLEWSVPEGTFDSFTV
QYVDVQGQPQELHLDSGSRTVTVPGLLPSHPYKFNLYGLWGQTRLGPISTDTITAAAPAA
EEAPSPPRLGEVTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVS
VPGLSPSCRYKFNLYGVWGRKRLGPISTDAVTAAAPAAEQPPSPPRLGEVTASHVSPNSV
QLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVPGLSPSRRYKFNLYGVWGRKR
LGPISIDAVTAAEEVEEQPTSQPRLGQLTASHVSPNSVQLEWSVPEGTFDSFTVQYVDVQ
GQPQELHLDSGSRTVTVPGLLPSHPYKFNLYGLWGQTRLGPISTDTITAAAPAAEETPSP
PRLGEVTASHVSPDSVQLEWSVPEGSFDSFTVQYKDAQGQPQVVPVDGGSRSVSVPGLSP
SRRYKFNLYGVWGRKRLGPISTDAVTGAPGTLWVGTLWPRSAQLHWAPPRVPPDGYNLTY
GPLGGPMKTLQLPPEATSKDLWGLEPTGHYMVQLRGRGLEPLETTFNTPPLPHPHPRDCA
EEQLNGPGPSREVLIFLGGDQRRPLRVFCDMESDGGGWLVFQRRMDGGTNFWRGWEEYVH
GFGNISREFWLGNAALHALTGSGPTELRVDLRTPSDSAFARYRDFAVGGPEDSFRLHLGA
YSGTAGDALSYHAGSPFSTRDHDPRGRPRPCAVAYTGAWWYRNCHYANLNGRYGVPYDHQ
GINWYPWKGFEYSIPFTEMKLRPQRD
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggggctgccgctgctgctgctggcgctggcacttcggagagcgcaagggaat
gcgggaacatcccccggtcctccccctgtccccccggagctctcctgtggggcagaggtg
ctggaggcggtgctgggacggctgcgggcactggagggagaagtgcgggcgctgcaggga
cagtgcggggacagcctggggccccaggctggcactggcagcacagcagcgcggaggcta
tgtgacacccctggggcagggggctgctgtgggtgccgcatgggggaggccggggatggt
ctcccgtgtcccgcaccccgctgtcccttcgactgcagtgaccagggacgttgccgtgct
ggccgctgccactgctttgagggcttcacaggaccattctgtgcgacccccatctgcccc
tctggccgtggtgggccccactgctccctcgagatcccctcagtgacgctgcgcctggct
gcgcgcaaccagacgtccttccgtgtgacctggccgcggccagccaagcctgtggatggc
tatgaggtggcagtcatccccatggatgaaccagcagcactgaccacccacgagctgcct
agttcagctgtcacctttgaagtgacagggctgacacctggacaagcttttgagatcttc
atccaggcccagcgggagcagcacctcggggcaccgggcaccttgcgtgtccgcaccttg
cttgcccagtctctgcccaaccaaggggggctacggggcacccctacatttctggcatct
ccagtggccccagcatcaccatcagcccgagggtctccagcatccccacggtccccagtg
tccctggggtccttggggtcaccagcatcctcaacatctccaaggtcaccagcatccctg
aggtctccagtgtccccggagtcctcagcagcaccaacttccctggaatccccattgtct
ccagagtccccagtgtccccgaggtcacctacatctcagtggtccccagcatccccacag
tccccactatccccagcatcccctgtgtccccagtgctcccaaatgtcccatccctgcat
gagctgggggtcaagctttcttcctacaatggatccttgctgcagcgcctagaaagccac
ctccgggccacggattttccactccgaggcaaccagacagtgcctgcagtggcccgtgcc
atcctctcctacctgcttcgccgcagcccggccttgctgcgtcatcaattcctccgccac
ctccagcagaacccccaccccaaacctcaggtgttgccaggagctgctggtgaggccctg
gtggatttggatgggctgcggggtcatgcggagaccatagtgatccgctatcagctgctg
gaggagccggagggggatgagggggagatgagggtgccaggggacaccacagtggcccgg
gtgccagggctggtgccaggggccacataccgggtggaggtgcacggtgtggtgcgggga
cgtgtctccaagtcctacacttccctggtgactgcagggctgggtgacaccagtgagcct
ccatcagaatggaagaacctctatgagatggaggggactgagccccagggggccatggcc
aaagcagcaccatcagaggaggaaccaacacagcagccccacctaggcatgctcacagtc
tcccacgtgactccaagctccatccagctggaatggagtgtcctggagggcacctttgac
tccttcacagtgcagtacagggatgcacaaggccagccacaggcacttgcggtggacggt
gggtcgcgcacagtgaccgtgcacgggctgtcgccgtcccgccgctacaagttcaacctg
tatggggtgtgggggcggaagcgcattggtttcatctccactgatgctgtcacagcttca
gcaaaaccaaaggaagaatcaccttcaccaccgcgcctgggtgaggtgacggcatcgcac
gtcagccccaactccgtgcagctggagtggagcgtccccgagggctcctttgactccttc
acggtgcagtacaaggacgcgcaaggccagccgcaggtggtgcccgtggacggtgggtcg
cgctcggtgagcgtgcacgggctgtcgccgtcccgccgctacaagttcaacctgtacggg
gtgtgggggcggaaacggctgggccccatctccactgacgccgtcacagctcctgcagcg
gaggaaccaccatccccaccacgcctgggtgaggtgacggcatcgcatgtcagccccgac
tccgtgcagctggagtggagcgtccccgagggctcctttgactccttcacggtgcagtac
aaggacgcgcaaggccagccgcaggtggtgcctgtggacggtgggtcgcgctcggtgagc
gtgcccgggctgtcgccgtcccgccgctacaagttcaacctgtacggggtgtgggggcgg
aaacggctgggccccatctccactgatgccgtcacagctgcagaagaggtggaggagcaa
ccaccaccccagccacgcctgggagagctgacagcatcccatgtcagccccaactccgtc
caactggaatggagtgtccccgaaggcacctttgactccttcacagtgcagtacgtagac
gtgcagggccagccgcaggagctgcacttggacagtgggtcccgcacagtgaccgtgcct
ggtttgctgccgtcccacccctacaagttcaacctgtatgggctgtgggggcagacacgt
ctgggccccatctccactgacaccatcacagctgccgcgccagcagcggaggaaacacct
tccccaccacgcctgggtgaggtgacggcatcgcacgtcagccctgactccgtgcagctg
gagtggagcgtccccgagggctcctttgactccttcacggtgcagtacaaggacgcgcaa
ggccagccgcaggtggtgcccgtggacggtgggtcgcgctcggtgagcgtgcccgggctg
tcgccgtcccgccgctacaagttcaacctgtacggggtgtgggggcggaaacggctgggc
cccatctccactgatgccgtcacagctgccgcgccagcagcagagcagccaccttcccca
ccacgcctgggtgaggtgacggcatcgcacatcagccccaactccgtgcagctggagtgg
agcgtccccgagggctcctttgactccttcacggtgcagtacaaggacgcgcaaggccag
ccgcaggtggtgcccgtggacggtgggtcgcgctcggtgagcgtgcccgggctgtcgccg
tcccgccgctacaaattcaacctgtatggggtgtgggggaggaaacggctgggccccatc
tccactgacgccgtcacagctcctgcagcggaggaaccaccatccccaccacgcctgggt
gaggtgacggcatcgcacgtcagccccgactccgtgcagctggagtggagcgtccccgag
ggctcctttgactccttcacggtgcagtacaaggacgcgcaaggccagccgcaggtggtg
cccgtggatggtgggtcgcgctcggtgagcgtgcccgggctgtcgccgtcccgccgctac
aagttcaacctgtacggggtgtgggggcggaaacggctgggccccatctccactgatgcc
gtcacagctgcagaagaggtggaggagcaaccaccaccccagccacgcctgggagagctg
acagcatcccatgtcagccccaactccgtccagctggaatggagtgtccccgaaggcacc
tttgactccttcacagtgcagtacgtagacgtgcagggccagccgcaggagctgcacttg
gacagtgggtcccgcacagtgaccgtgcctggtttgctgccgtcccacccctacaagttc
aacctgtatgggctgtgggggcagacacgtctgggccccatctccactgacaccatcaca
gctgccgcaccagcagcggaggaaacaccttccccaccacgcctgggtgaggtgacggca
tcgcacgtcagccctgactccgtgcagctggagtggagcgtccccgagggctcctttgac
tccttcacggtgcagtacaaggacgcgcaaggccagccgcaggtggtgcccgtggacggt
gggtcgcgctcggtgagcgtgcccgggctgtcgccgtcccgccgctacaagttcaacctg
tacggggtgtgggggcggaaacggctgggccccatctccactgatgccgtcacagctgcc
gcgccagcagcagagcagccaccttccccaccacgcctgggtgaggtgacggcatcgcac
gtcagccccaactccgtgcagctggagtggagcgtccccgagggctcctttgactccttc
acggtgcagtacaaggacgcgcaaggccagccgcaggtggtgcccgtggacggtgggtcg
cgctcggtgagcgtgcacgggctgtcgccgtcccgccgctacaagttcaacctgtacggg
gtgtgggggcggaaacggctgggccccatctccactgatgccgtcacagctgcagaagag
gtggaggagcaaccaccaccccagccacgcctgggagagctgacagcatcccatgtcagc
cccaactccgtccaactggaatggagtgtccccgaaggcacctttgactccttcacagtg
cagtacgtagacgtgcagggccagccgcaggagctgcacttggacagtgggtcccgcacg
gtgaccgtgcctggtttgctgccgtcccacccctacaagttcaacctgtatgggctgtgg
gggcagacacgtctgggccccatctccactgacaccatcacagctgccgcgccagcagcg
gaggaagcaccttccccaccacgcctgggtgaggtgacggcatcgcacgtcagccctgac
tccgtgcagctggagtggagcgtccccgagggctcctttgactccttcacggtgcagtac
aaggacgcgcaaggccagccgcaggtggtgcccgtggacggtgggtcgcgctcggtgagc
gtgcccgggctgtcgccgtcctgccgctacaagttcaacctgtacggggtgtgggggcgg
aaacggctgggccccatctccactgacgccgtcacagctgccgcgccagcagcagagcag
ccaccttccccaccacgcctgggtgaggtgacggcatcgcacgtcagccccaactccgtg
cagctggagtggagcgtccccgagggctcctttgactccttcacggtgcagtacaaggac
gcgcaaggccagccgcaggtggtgcccgtggatggtgggtcgcgctcggtgagcgtgccc
gggctgtcgccgtcccgccgctacaagttcaacctgtatggggtgtgggggaggaaacgg
ctgggccccatctccattgatgccgtcacagctgcagaagaggtggaggagcaaccaact
tcccagccacgcctaggacagctgacagcatcccatgtcagccccaactccgtccaactg
gaatggagcgtccccgaaggcacctttgactccttcacagtgcagtacgtagacgtgcag
ggccagccgcaggagctgcacttggacagtgggtcccgcacggtgaccgtgcctggtttg
ctgccgtcccacccctacaagttcaacctgtatgggctgtgggggcagacacgtctgggc
cccatctccactgacaccatcacagctgccgcgccagcagcggaggaaacaccttcccca
ccacgcctgggtgaggtgacggcatcgcacgtcagccctgactccgtgcagctggagtgg
agcgtccccgagggctcctttgactccttcacggtgcagtacaaggacgcgcaaggccag
ccgcaggtggtgcccgtggacggtgggtcgcgctcggtgagcgtgcccgggctgtcgccg
tcccgccgctacaagttcaacctgtacggggtgtgggggcggaaacggctgggccccatc
tccactgatgccgtcacaggtgccccaggaacgctatgggtgggcacgctgtggccccgc
agtgctcagctgcattgggcgcctccccgtgtccccccagatggctacaacctcacctac
ggacccctcggaggccccatgaagacactgcagctgccccctgaggcaacatccaaggac
ctgtggggcctggagcccactggacactatatggtgcagctccggggccgggggctggag
cccctcgagaccaccttcaatacccccccccttccccacccacacccccgagactgcgct
gaggagcagctcaatggaccagggccttcacgagaagtcctcatcttcctcgggggtgac
cagcgacggccactgcgcgtcttctgcgacatggagagcgatgggggaggctggctggtg
ttccagcgccgcatggatgggggcaccaacttctggagggggtgggaggagtacgtgcac
ggcttcgggaacatctccagggagttctggctgggaaatgcggcgctgcacgcgctgaca
ggttctgggcccacggagctgcgcgtggacctccggacgccgtcagacagcgccttcgcc
cgctatcgggattttgccgtcggtggtcctgaggacagttttcgcctccatctcggggct
tacagtggcacagctggggatgcactgtcctaccacgctgggagccccttctccacacgg
gaccacgacccccggggccgcccccggccctgcgctgtcgcctacacgggagcctggtgg
taccgcaactgccactatgccaacctcaacgggcgctatggggtgccctacgaccaccag
ggcatcaactggtacccctggaagggcttcgagtactccatccccttcacagagatgaag
ctgcggccgcagcgtgactga
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integrated database retrieval system
