Lagopus muta (rock ptarmigan): 125686310
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Entry
125686310 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: proto-oncogene vav-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125686310
09142 Cell motility
04810 Regulation of actin cytoskeleton
125686310
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GFIT
Motif
Pfam:
SH3_2
SH3_1
SH3_9
RhoGEF
SH2
C1_1
SOS1_NGEF_PH
PH
C1_2
RHG20_PH
Prok-RING_1
Phage_zn_bind_8
DUF7662
Motif
Other DBs
NCBI-GeneID:
125686310
NCBI-ProteinID:
XP_048786047
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Position
34:complement(230536..269082)
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AA seq
602 aa
AA seq
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FGSKSTLFLIPSVGFGAVWGPAPFWVILGRFGHFWPLRFLLYGRYCSQVEAAARRLDQLA
AGTDIRMKLQECSQRANNGRFSLRDLLMVPMQRVLKYHLLLQELVKLTPDPSERERLRAA
LDAMRDLAQCVNEVKRDNETLKQLTSIQLCLHNMPQSLAQFGRPKIDGELKVCSSEKRSK
ADRYGFLLDKALIICKRRGDAYEAKDVVDLQSHQLRDSGLGPRDGKKWSHTFLLINTAGL
QGYELFFKTRELKKKWLEQFEMALSNIFPEHALADGHDFQMFSFEDTTSCRACQMLLRGT
FYQGYRCNRCRAPAHKECLGRMGTCGADPSSGNRKMKSQRPAHENKAADLGLPKMEANQH
YSGVPPPPGNVGPALRLSPGDVVEATVAEAEQLWWQGRNVVNGETGWFPCAAVRPFICAP
LPDLSVYLWYAGPMERGEAEQILTPRSDGTFLVRQRVKDTGEFAISIKYRAEVKHIKVMT
GEGLYRLNEKKAFKGLVDLVEFYQCNSLKDCFKALDTALLVPFKEPERRTSPRPPGAVRN
FGSAKARYDFCARDRTELTLREGDIIRVLSKKGHPGWWKGEIYGRVGWFPANYVEEDYSE
YC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
tttgggtccaaatccaccctgtttttgattccatctgtggggttcggtgccgtttggggt
ccggcgccgttttgggtcattttgggccgatttgggcacttttggcccctcaggttcctg
ctgtacggccgctactgcagtcaggtggaggcggcagcgcggaggttggatcagctggcg
gccggaaccgacatacgcatgaagctgcaggaatgttcccagagagccaacaatggccgc
ttctccctgcgggatctcctgatggtgccgatgcagcgggtgctgaagtaccacctcctg
ctgcaggagctggtgaagctgaccccggatccatcggagagggagaggctgcgggcggcg
ctggatgccatgagggacctggcacagtgcgtcaacgaggtcaaacgggacaacgagacc
ctaaagcagctcaccagcatccagctctgcctccacaacatgccccagtccttggcgcag
ttcgggcgcccaaaaatcgatggggagctgaaggtgtgcagcagtgagaagcgctccaag
gcggacaggtatgggttcctcctggacaaggctctgatcatctgcaagcgccgtggggac
gcttacgaggccaaggatgtcgtggacctacagagccaccaactgagggacagtggcctc
gggcccagggatggcaagaagtggtcccacaccttcctgctcatcaacacggccgggctg
cagggctacgagctcttcttcaagacacgcgagctgaagaagaaatggctggagcagttt
gagatggccctgtccaacatcttcccagagcacgccctggcggatggacacgacttccag
atgttctcctttgaggacaccacgtcctgtagggcctgccagatgctgctgagagggacg
ttctaccagggctaccgctgcaaccggtgccgggctcctgcgcacaaggaatgtttgggg
aggatggggacctgcggagccgatccgagctctggcaacaggaagatgaaatcccagcgc
ccggctcatgagaacaaggctgcagacctggggttgcccaagatggaggcgaaccagcac
tacagcggggtgcccccaccgccgggaaatgtgggtcctgccctacgtctcagccctggg
gacgtcgtggaggcaacggtggcggaggcggagcagctgtggtggcagggcaggaacgtg
gtcaatggtgagacgggctggttcccctgtgctgctgtcagacccttcatctgtgcgccg
ctgccggatctctctgtctacctctggtacgccggccccatggaaaggggggaagcggaa
cagatcctgaccccccgctctgatggcacgttcctggtgcggcagcgggtgaaggacacg
ggagaatttgccatcagcatcaagtaccgtgcggaggtgaagcacatcaaggtgatgacg
ggcgaggggctgtatcgcctcaacgagaagaaggccttcaaggggctggtggatctggta
gagttctaccagtgcaactcgctcaaggattgcttcaaggctctggacacggccctgctg
gtgccattcaaggagcccgagaggaggaccagcccacgaccccctggggccgtgcgtaat
ttcgggtcggccaaagctcgctatgatttctgcgcccgcgaccggacggagctgacgctg
cgggaaggggacatcatccgcgtgctcagcaaaaaggggcatccgggatggtggaaaggg
gagatctatgggcgggtcggatggttccccgccaactacgtggaggaggattattcggag
tattgctga
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