Lagopus muta (rock ptarmigan): 125686482
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Entry
125686482 CDS
T09141
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125686482 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lmut04091
]
125686482 (FREM1)
Lectins [BR:
lmut04091
]
C-Type lectins
Lecticans
125686482 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Jag_N
Motif
Other DBs
NCBI-GeneID:
125686482
NCBI-ProteinID:
XP_048786455
LinkDB
All DBs
Position
Z:complement(32143205..32215960)
Genome browser
AA seq
2184 aa
AA seq
DB search
MKPFEKTWLLLLLSVLLRAVCSSFISVNLGIKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVRNEPITQRVGKLTPQVFDCHFHLNEVKYTHNGCPILDADTVMLRLYRFTENETFVETF
TLHVQLLEPDCNIIKMRSRALEVPEYYGLSRAIDKNILTFDYNRKMNLECTISIASSETH
LPAHGQLMLEGMQQEQLRGDQPQSFLLGPKHSPGQQCRNGSCVLGLRVIHNTKMSCEEFL
RKGIRYQHLDPRSPDIDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKSATPNQIPKAVPMT
KFILEVDQFILTPITTTTVDAEDKETPKSLLVFNITKPPLQGFITHLSDHTKPVGSFTWK
DLSETLIAYQPPNNSHTEKRNYELEVEVHDFYFERSLPIIVQLSIRTADTNAPRVSWNTG
LSLLEGQSRPITWQHLQVVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQTGAV
YYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPKDDSPPFLISNVAIEAQEGQTILIQ
GSMLQASDMDSSDDYIVFNITKPPQAGEIMKKPGPNLIGYPVSSFLQKDLFNGIIYYHHL
GGEVFEDSIEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEIAYL
TKKHLHFIDVEEHDRELTYTITSSPFFSCVHGHSDAGKLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLQDIGPNPQQVQFVFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TSHLRVEEGGLSPVTEGHILISDVDTKQEHLLLLLQRQPQHGAVELDGVPMREGDKLSCG
DLHTLAVSYRHDGSETLTDEVLFAATDGIHFLEFTLQVKVLPVNDEPPVMQTGLINVVRC
PEGEEVVLSSEYIYATDADSDDMKLVFVLVRQPSQGVLRKAGIVVERFSQADVISGLVTY
KHTGGEIGLNLSFEILTFVVSDDEAGPDVKDCCYDRPLPPPVPLHRPLPVYNLNVTVLPV
DNQPPSIATGARFVVEEGSSTALTSNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGISIASFQLKHLKALSINYVQARHMRVEPRADHFVLYATDGLRRSAEIPFFVL
INPTNDEVPEFIARNITVQEGMVKELDLSVINAVDLDVPQDHLVFDVVQQPSHGFLINGV
HGNDILQYKELIHHHSSGLLVHDFSMELLKNGMKLMYMHDDSENLNDSFKIQLSDGKHKV
LRTISVKVIPVNDEKPVLSKKDNIEVRMGETRIISSAVLSAEDKDTPRERIFYLFERLPE
NGQLQIKVGKDWVTLQTGMKCTQEELDMNLVRYVHTGAIGSKNQDLFTFYLWDGYNRSPA
VDFYINIKNMEKGDIAVFIKPLKVPKGDRGYITTDVLLSLDGTDKPEELLYVITSPPQYG
QIEYVSYPDIPITSFSQMDVASQIVCYVHSTKAHSRQDAFRFIISNGLRTKHGTFTISLE
AVDQTLPTLSRNMGLRLTEGNMVLLSPDVLQLTDSDTAKENLTFLLAQLPQYGHLYYRGA
VLLQYNFTQCDVDNMDIAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQIEPVAFIIQV
DHLDKMAPRIIHLRCLSDVEMLKNGNYGIYITSRSLKATDSNTEDDKIFFKILRGPRYGY
LENITTGGLIHEGFSQKDLNSKIIFYVINPLWEVHSDNLEFQVTDTNGNSAIPQMLELRW
SRIEMQQTEYEVCENMGMVSLKITRAGHSTDSAFIVVKVNEISAVLGKDFTATPSKLIQF
DPGMSTKMWNIAITYDRLEEDDEVFEVVLNSSVNAVLGTKTKAVVKILDSKGGQCSSLHS
SSQSKQDFWRRSTLFAVSSGSSSPPRPGSVNLEGIPPPPSKRMREHRGDILQEPSLANRS
RARLRVTGNGRIVHPSSVFRNGTDVVYKYHGMVSLKTEDDISSAKANKKAEVSVINQAQS
QINAISTRKTEIPQADKAELASEPSSRRRGIHSFSRACTPDLKGLMHYEGSIQKLFQCDG
IEWKFWSSQSKEADMKKCPSGWRHHDGSCYFLVVNQKVTWDTAAQVCREQYLGSLTSVAN
ERHMQWLWDFSGRKPFWIGLNDQVNPGHWEWNGGEPVTYINWRRGSNHFPKRGNNCVVVQ
KRGKWQATDCRKARRNSYICSRKL
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaacctggttgttgctattgctgtctgttctcctaagagctgtc
tgctcgtcttttataagtgtcaaccttggcattaaagtgatgaaaggacagtctgttttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtgtgcaaagtcgaa
gttgtgagaaacgagccaataacgcaaagggttgggaagctaaccccacaggtttttgac
tgtcactttcaccttaatgaagtcaagtatacccacaacggttgtccgattttagacgca
gacacagtcatgcttaggctgtacaggtttacagaaaatgaaacatttgtagaaacattc
accctccacgtacagttacttgagccagactgtaacatcatcaaaatgcgctcccgagct
ttggaggtgcctgaatactatggtctgtccagggcaattgacaagaacatcctcactttt
gactacaacaggaagatgaatttggaatgcaccatttccatagcttcttcagaaacccac
ctccctgctcatggccagctcatgctggagggcatgcagcaggaacagcttcgaggggat
caaccacagagcttcctccttggccctaagcacagcccaggccagcagtgcagaaatggg
agctgtgtgttgggactgagagtcatccataacacaaaaatgagctgtgaagagtttctg
aggaagggcattcggtatcagcaccttgaccctcgctcaccagatattgattatattcca
gtgaggctggatctcacagatagcagaagcaaaactctgcacaagactgagtatgcgtgg
ctccctgttcagattaaaagtgctacgcccaatcaaatacccaaagctgttccaatgaca
aagttcatcttggaagtagaccaatttattttaactcccattacaaccacaacggttgat
gctgaagataaggaaactccaaagtccctgctggtgttcaacattacaaagccacctctg
caaggcttcattactcacctatcagaccacacaaagcctgttggttccttcacatggaaa
gatctcagtgaaacacttattgcttatcagcctccaaacaacagccacacagagaagagg
aattatgagctggaggttgaggttcacgacttctactttgagaggagtttaccaatcata
gtgcaactttctattagaacagcagatacaaatgctcctcgggtttcatggaatacaggc
ctcagcctcctggaagggcaatcccggccgatcacatggcagcacctgcaagtggtagac
aatgatgatatccaaaatgttcgcctggtcacagttgatggcttacagcatgggcggctc
acggtgagaggaggaaaaggattcatgtttacagtttctgatattcagactggagctgtt
tactaccatcacgatgacagtgattccacaaaggattttgtggtgttcaggatttttgat
ggcctgcatagtattcgccataagtttccaatcaatatcctccctaaagatgacagccct
ccatttcttatcagcaatgtggcaattgaagcacaggagggacagacgatcctgatccag
ggctccatgcttcaagcttctgacatggattccagtgatgactacatagtattcaatatt
accaagccaccacaggctggagaaatcatgaagaaaccagggccaaacttaatagggtat
cctgtcagcagttttcttcagaaggatctgtttaatggaattatttactatcatcatttg
ggaggagaagtatttgaagattctattgagtttgtgctgtgtgatagccatgaccctccc
aatctctcagagccacaggtgatgatggtgcacattatacctgtggatgaccagctaccc
agagaagccccaggagtgacccgccacctggttgttaaggagactgagattgcttaccta
actaagaaacatctccactttatagatgtggaagagcatgacagggagctcacgtacacc
ataacctcttccccatttttctcttgtgtacatggccactccgatgctgggaagctattt
atggtggacaccatccccaaactggtcaaggatcctgctgctcttgctctgaggtcattt
actcagcacgctgtgaactatatgaaggttgcttacatgcccccactgcaggatattggg
cccaatcctcaacaagtccagtttgtattttctgtcagcaatcagcatggtggcactttg
tatggaatctgcttcaatattactattcttcctgtggacaaccaagccccagaggttttt
acaagccacttgagggtggaagagggtggcctgagccctgtcacagagggacacattctc
atctctgacgtggacacaaaacaggaacatctcctcctccttctgcagcgacagcctcag
catggggcagtggagctggatggtgttcccatgagggagggtgacaagctttcctgcggg
gacctgcataccctggcagtcagttatcggcatgatggttctgagactcttacagacgaa
gtcctttttgcagccacagatggcatccacttcttagagttcaccctgcaggtcaaggtg
ttgcccgtgaatgatgagccacctgttatgcaaacagggcttatcaatgtggtgcgttgc
ccggagggtgaagaagtggtcctctcctcagagtacatatatgccacagatgcagacagt
gatgacatgaagctggtgttcgtgctggttcgccagccctcccagggtgtgctgagaaaa
gctggaattgttgtggagcgtttctcccaggctgatgtcatctctggcttggtcacctat
aagcacactggtggggagattggcttgaatctttcctttgagatcttaacttttgttgtt
tctgatgatgaagccggcccagatgtgaaagactgctgttatgacagacctcttcctcct
ccagttcctcttcaccgtccactcccagtgtataaccttaacgtcactgtacttccagtg
gacaaccaacctccatctattgcaactggtgcaaggtttgttgtggaggagggctcctca
acagcccttacctctaaccatttgtttgccaccgaccctgacaccactgcagatgactta
gagtttgtcttggtttctcctcctcagtttggttatattgaaaatatactgccttctcct
gggtttgaaaagagtaacattggtataagtatagcttcgtttcagttgaagcacctgaaa
gccctgagtataaactatgtacaagccaggcacatgcgagtggagccaagagcagaccac
tttgtactttatgccaccgatggcctgcgtcgttcagcagagattccattttttgtgctg
atcaacccaaccaatgatgaagtcccagaattcatagcaagaaacattactgttcaagaa
ggtatggtgaaagagctggatctctctgttatcaatgctgttgatctggatgtgcctcaa
gaccatttggtatttgatgttgtgcagcagccttcacatggattcctcattaatggagtt
catggcaatgatattctacagtacaaagagttaattcaccaccacagcagtgggttgctt
gttcatgacttttctatggagctactgaagaatggtatgaaactgatgtacatgcatgac
gattcagaaaacctcaatgacagctttaaaatccagctatcagatgggaaacataaagtc
ctcagaaccatttcagtaaaggtcatcccagttaatgatgagaaaccagtgctgagcaag
aaggataatatagaggtgcgtatgggtgaaactcgaattatttctagtgctgttctgtca
gctgaagataaagatactcctagagagagaattttctacttatttgaaagacttccagaa
aatggccagcttcaaatcaaggtaggcaaagactgggtgactctccaaaccggaatgaag
tgcactcaggaagaactggatatgaaccttgtcagatacgtccacacaggagctataggg
tccaagaaccaagacttgttcacattttatctgtgggatgggtacaacagatccccagct
gtagacttctacataaatatcaagaacatggaaaagggagacattgctgttttcataaag
cctctcaaagtaccaaaaggggatcgaggctacattacgactgatgtcctcctttcactg
gatggtactgacaagcctgaagagcttctctatgtgataacttcccctcctcaatatgga
caaatagagtatgttagctatcctgacatccccataacgagcttcagtcaaatggatgtt
gcaagtcagatagtctgctatgttcacagcaccaaggcacattcaaggcaagatgcattc
agattcatcatcagcaatggactgaggactaagcatggaacattcacgatctccctggag
gcagttgaccaaactttgcctacactatctaggaacatggggttaagattaacggaaggc
aatatggtactcctttctcctgatgtcctgcagcttacagactctgacactgccaaagaa
aaccttaccttcctcttggctcagctcccccagtatggtcatctctattaccgaggggct
gtactactacagtacaatttcacccaatgtgatgtggacaatatggatattgcatacaag
caccgaggtggggattcacagattgacagatttacatttgttgcaacagataggactaac
caaggcttcatcgtgaatgggagggtgcagattgagccagtggcattcatcattcaggta
gatcatttggacaaaatggcaccaagaatcattcatctccgttgcttatctgatgtggaa
atgctgaagaatggcaattatgggatctacattacttccaggtccctgaaggcaactgac
tccaatacagaggatgacaaaatattttttaagatcttacgaggtcctcgttatggttac
ctggaaaatataacaacaggtggacttatccatgaaggctttagccaaaaggatttaaat
agcaaaattatattttatgtcatcaatccactgtgggaagtgcattcagacaacttggag
tttcaagtcacagataccaatggaaattcagcaattccccaaatgctggaactacggtgg
tctcgcattgaaatgcagcagactgaatatgaagtgtgtgagaacatggggatggtgtct
ctgaaaatcacgagggcagggcactctactgactctgcctttatcgtggtgaaggtcaat
gaaatatctgctgtgctgggaaaggactttacagcgactccctccaaacttattcagttt
gatccaggaatgtcaaccaagatgtggaatatagcaattacttatgacagattagaggaa
gatgatgaagtctttgaagtagttctgaactcctctgtgaatgctgttcttggcaccaag
acaaaagctgtagtgaaaattttggactcaaaaggaggtcaatgcagttctttacattct
tccagccaaagcaaacaagacttctggaggagaagcacgctgtttgcagtttcctcaggc
tcctcatcacctcccaggcctggcagcgttaacttggaagggatcccaccacctccttcc
aaaaggatgagagaacacagaggtgacatactgcaggagcccagcttggcaaatcggtca
agggccaggctgagagtgactggaaatggcagaatagttcatccttcatctgtatttaga
aatggaacagatgtggtttacaaataccatgggatggtatcactcaaaacagaggatgac
atctcatcagctaaagcaaacaagaaggctgaagtgtcagtaattaaccaagcacaatca
cagataaatgccatttccactaggaagacagaaatcccacaagctgataaggcagaactg
gcatctgaaccaagctcaagacgtcggggcattcactctttttcaagggcctgtacacca
gatttgaaggggctcatgcattatgaaggaagcattcaaaagttatttcagtgtgatggg
atagaatggaaattttggagttcccaaagcaaggaggcagacatgaaaaaatgtccctcc
ggatggcgtcatcatgatggcagctgctatttcctggtagtgaatcaaaaggtcacctgg
gatactgctgctcaggtctgcagagaacaatacctggggagcctcacaagtgtggctaat
gaacgacacatgcagtggttgtgggacttcagtgggaggaagcccttttggataggcctg
aatgaccaagtcaatcctggacactgggagtggaatggaggagaacctgttacctacata
aactggagaagaggctccaatcactttccaaagagaggcaacaactgtgtagtggtgcag
aaaagaggaaaatggcaagcaactgactgcaggaaggccagacggaacagctacatatgt
tcaagaaagctgtaa
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integrated database retrieval system
