Lagopus muta (rock ptarmigan): 125686508
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Entry
125686508 CDS
T09141
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125686508 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125686508 (DMXL1)
Membrane trafficking [BR:
lmut04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125686508 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125686508 (DMXL1)
RAVE complex
125686508 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Beta-prop_Vps41
MIOS_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
125686508
NCBI-ProteinID:
XP_048786508
LinkDB
All DBs
Position
Z:complement(72202836..72275955)
Genome browser
AA seq
3098 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSVQQGKIAASYGNVVCIFEPVSLLKQSSRHHNQLHYQWQKNAQILLDGIAHNLTW
DPTGTRLLTGSSCLQLWSNVPLENLPDNDSTDRTDVGEWRCIWQCNTASQVCLMKFSPDG
EFFATAGKDDCLVKVWYNTDNWRSAVTPPGASPGKQAQEVDFSFVYLAHPRSVNSFSWRK
TSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPSDSLLYDGGYNNWTEAVNFTNSFKRNTS
SKERMQNALELNLRHFRRGRRRSGAVVAHTGYSPHQQDPHEVHRNILPHANALCHFHIAA
SINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKKNFEHHS
PETNTEESNPMDVRSEEETNENGDEQKGNEEKKVLGDEKTTPASSLVPSSSAVVDHEVEV
LLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANS
LCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMMIS
KHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAL
SSPDVENAKQANDSLNSKESTVRLQGRGSANVTSQDPNAVYSELILWRVDPVGPLSFSGG
VSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDAKK
LLCEQSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFILNN
QEKETPDKKNNVVDSGKQQNGFSEKFYLIVIEYTQSRSLLHMWHLHLKSIPVSVDEKIDS
STPDTATQTEELYSSPDPEKIQSPFTQKYQACRANLQSTSWLTLSSKMVYSQELSLPEGV
EIISVKPSAGHLSSSSIYPVCRAPYLLATSCTDGKVRFWRCRVTNESSVSSMPESNVHSD
VTYIWEEWPLLIEDGLLSSSAINVPGSPTEVSCAHTNRLAVAYKQVTSKNNHLSQDFVMH
VSIFECESTGGSSWVLEQTLHLDEIGTMLDSAVSIDSNLVAYNRQEVSLSCGNVIPSTKH
LVHLDWMSREDGSHILTVGIGSKLYMFGQLSGKMQEQIGKEAVAISHIGSTTTKATNFSR
FVLLRSVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPPAKQGPVSTDSCS
MPSITSLMKESQSAASGLPPPKRTLTRSMTSLAQKLSGKRSAFDLSAEMEDSGLFEAAHM
LSPTLPQYHPHQLLELMDLGKVRRTKAILSHLVKCIAGEVVAVNESEPNHDRRLRSLTIS
ASGSTSRDPKTFSKMETTDYIEIDSVPPLPLYALLAADDDSSHSCSEKSHSQNSQSKNDM
PKDNYEDLFQNSVISTDELVTFDAEEDSVKPKVIDLSQFSPTYFGPEHAQVLSRHLLHSS
LPGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSL
PPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAMQKGDPTWSELRAMGIGWWVRNIH
SLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFSEDR
WRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLALVISRLYESEFE
VSSTYKSVLQKRILGSVFSGKESTGNMYNDPFLRSMGYWILEDYSKALDTLIKHSFEDEG
DVGDGSASCNPAVFNFYNYLRTHPLLLRRHFGSSDASSTHMCLTVENGLADKINLDERRL
FFTTAYAHLKAGCPMLALEVLSKMPKVVKRSKPFCGSPSLMDTSKDFSPSSPLKELEIKD
ESSSIDWSQPALNDLGSSSDCSSGKHSSSTLSFDWSQPNIVFQDDEGLKLQLDSDEGDEN
EDSSLVMKELKPLKKNEKSYETSSSYTESFSIVDEKDILSPSEDIISAQLKFRACLKILT
VELRTLSTGCEVDGGKLRYQLYQWLEREVIALQKTCDYSVEIDEVQSGVSMMPEEAALHG
NTVDLTDQQKNMLQKGNFQKRRQWLLKYQSLLRMFLSYCVLHGSHGGGLASVRMELILLL
QESQQEQSIQIPSSPVLEQSSVPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLDSP
PHPDTQNNKIYVMHNLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLAQRNSLRS
TLEETVTPNTPPAQWPGITALVRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHS
SSELYRIMTHPLNNKMWSAIFGGGAHTPIKGQQQLKTKTGRHFPMPSPHQVVVFSMECVG
FSKSLTTFSTHSPTKSADDGEKQQKCFKLSSTTSPKESSRAAAVPWLDQESPSYKERFIP
PELSIWDYFIAKPFLPSQSRVEYDSEESQESGEDDDDIDGDAFAANSNNQEHLNANSYSW
SLMRLAMVQLVLNNLKIFYPLAGHDLSELPVSSPVCHAVLKTLQRWEQVLLRRLELYGGP
PQHYISVHASEDALAAGPALLRHKTLLEPANTPFRSNSHVALSVKRLWQYLVKQEEVQET
FIRNIFTKRRCLNESLEDHSDTLKNSVVEEPIVNKIETDLGYPGGKARIIHKESDIITAF
AVNKANRNCIAIASSHDIQELDVSAILATQIYTWVDDDVEVENKGADDFLVIHARDDLVN
VQGTTPYTHSNPGTPINMPWLGSTQTGRGASVEYSNKFNGIRKELARKEMLKKAINNVRR
MASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKFGVVDADG
YISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGLSSDNRNICLWD
TLVSPTNSLVHAFVCHDSGATVLAYAPKHQLLISGGRKGFTCIIDLRQKQQQQLLQSHDS
QVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTFINEHSRQSLFRNIGTGVMQIETG
PANHILSCGADGTVKMRILPDRFSPFNEVLKSDVKFMM
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggagccgtgaaccccggggacaactgcttctccgtg
gggagcttgcacgatcagcccttcacggcatacgcatcaggatgcgatatcgttgtatta
gggactgactttgaaagattacagataatcccaggtgcaaaacatggaaacattcaagtg
ggatgtgtggactgttcagtgcaacagggaaagattgcagcttcttatggaaatgtggtt
tgtatctttgagccagttagtctcttgaagcagagcagcagacatcataaccaattgcat
tatcagtggcagaagaatgctcaaatcttactggatggtatagcacataatttaacatgg
gatcccacaggcactcgccttttgacaggttccagttgtcttcagctttggtccaatgtt
cctttggagaacttgcctgacaacgacagcactgacagaacagatgttggtgaatggagg
tgtatctggcaatgcaatactgcttctcaagtttgtttaatgaaattctcaccagatggg
gagttttttgctactgctggaaaggacgattgtcttgtgaaagtgtggtacaatacagac
aactggcgatcagctgtaacaccaccaggagcgagtccaggaaaacaagcacaagaagtt
gatttttcatttgtttatttggcccatcctcgatcagtgaattcattttcatggaggaag
acaagcaaattcatgccgcgtggtgctgtctgcaacgtactcttgacttgctgtaaggat
aacgtttgtcgtctctgggcagagactttgttaccaagcgatagtctgctctatgatgga
gggtataacaactggactgaagcagtgaacttcacaaatagtttcaagagaaatacttca
agtaaggaacgaatgcaaaatgcattagagttaaacctgaggcactttcgacgaggaagg
aggaggtcaggtgctgttgttgcacatactggatattctccacatcagcaagatcctcat
gaagttcacaggaacattcttcctcatgcaaatgcactctgtcacttccatattgctgcc
agcatcaatccagcaacagatattcctctactcccttctatcacatctttgagccttggt
gaaaatgaagaaaaaagtggacccttcgtagtgcactggctgaacaataaagaacttcat
tttaccttatccatggaagtatttttgcagcaacttaaaaagaattttgaacatcattct
cctgagacaaatacggaggaatccaatccaatggatgtaagatcggaagaagaaactaat
gaaaatggagatgaacagaaaggaaatgaagagaagaaggtactgggtgatgaaaagact
actccagcatcaagccttgttccttcatcttctgctgttgtagatcatgaagttgaagta
ttgctttctgaatggagtaaaaacgctgatatgctattcagtatacatcctatggatggt
tcactgctagtgtggcatgtagactggctggatgaataccaacctggaatgtttcgacag
gtgcaggtgtcttttgtttcaaggattcctgttgcattcccaacgggtgatgcaaactct
ctttgcagaagtatagtgatgtatgcatgtaccaaaaatgttgacttggctattcaacaa
ggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttctggacac
agtaaatcaaccaacagtttaaaactgagtattttcacacccaatgttatgatgatttcc
aaacatgcagatgggtctttgaaccaatggctagtgagttttgctgaagaatctgccttt
tcaactgtgcttagtatttcacataaatcaagatactgtggtcaccgttttcatcttaat
gacttggcttgccattcagtattaccactgctgcttacaacttcacatcacaatgctcta
agttcaccagacgttgagaatgcaaaacaggcaaatgattctttaaactctaaggagtca
acagtaagacttcagggtagaggcagtgcaaatgtaacatcccaggatcccaatgcagtt
tacagtgaacttattctttggagagttgatcctgttggaccgttgtccttttctggtgga
gtttctgagcttgctcggatcaattctctccatgtttcagctttttctaatgttgcatgg
ctgcccacacttatacccagctattgccttggtgcatactgtaattctccaagtgcctgc
tttgtggctagtgatggacagcatttgagattatatcaagctgtaatagatgctaaaaaa
cttttgtgtgagcaatccaatccagagatttctaaatacgttggtgaagttttcaacatc
ataagtcagcaatctactgcacgtccaggatgtatcattgaattggatgctatcacagag
cttcatggcaggaaaacacagttattccatgtttttcaagaagacttcattttaaataac
caagagaaagaaacacctgataagaagaataatgtagtggattctggaaaacagcagaat
ggattttctgaaaaattctacttaatagtaatagagtatactcaaagccgttcattactg
cacatgtggcatttacatttgaagtctattccagtctcagtagatgaaaagatagactca
agtactcctgacacagcaacacaaacagaagagttgtattcttcaccagatccagagaag
atccagtcacctttcacacaaaagtatcaggcctgtagagcaaaccttcagagcaccagc
tggctcactctgtcttcaaaaatggtgtatagtcaagagctgagtttgccagaaggagtg
gaaataataagtgttaagccttcagcagggcatctgagcagttcttccatataccccgtt
tgccgtgcaccctatctgctggctacttcatgcacagatggaaaagttcgattctggaga
tgcagggtgaccaatgaatcgtcagtttcttccatgccagaatctaatgtacacagtgat
gtaacatacatctgggaagaatggccgttactgattgaggatggacttcttagtagtagt
gctattaatgttccaggaagcccaactgaagttagttgtgcacacacaaaccgattagct
gtagcatacaagcaggtaacatctaaaaacaaccacctttctcaagactttgttatgcat
gttagtatttttgaatgtgaatctacagggggttcttcatgggttcttgaacagactctt
catttagatgagataggcactatgttagactctgctgttagtattgatagtaatttagtg
gcatataacagacaggaagtttctctctcatgtggtaatgttattcctagtactaagcac
ttagtacacttagactggatgtctagggaggatggttcacatattctaacagtgggaatt
ggatcaaaactttatatgtttggccagctgtctggaaaaatgcaagaacaaattggtaag
gaggctgtagcaatctcccatattggcagtactactacaaaggctacaaacttttctagg
tttgttctgctgcgttctgttgacttggtttcttctgtagagggatcacctccttttcca
gtctccctgtcttgggtgcgtgatggtattcttgtagttggaatggactgtgaaatgcat
gtttattctcaatggcaacctcctgccaagcagggtccagttagtacagattcctgcagt
atgccaagtataactagcttaatgaaagaaagccagtcagctgcctcaggtctgcctcca
ccaaagcgaaccttgaccagatctatgaccagccttgcacagaaacttagtgggaaaaga
tctgcctttgatctgtctgcagaaatggaagactctggtctttttgaagcagctcatatg
ttatctcccactttacctcagtaccatccacaccaactgttagaactcatggatcttggt
aaagtacgtagaacaaaagctattctgtcccatctagtgaagtgcattgctggagaagtt
gttgctgtaaatgaatctgagcctaatcatgataggagacttagatctctgaccatcagt
gctagtggaagtacttcacgagatcccaaaacgttcagcaaaatggagactacagactat
attgaaatagactctgttccaccattaccgctgtatgctctgcttgctgcagatgacgat
tcctctcattcctgttcagaaaagtctcatagtcaaaatagtcaaagtaaaaatgatatg
cccaaggacaattatgaagatctctttcaaaattctgttataagtacagatgaacttgta
acgtttgatgcagaggaagacagtgtgaaaccgaaagtaattgatctttcgcaatttagc
ccaacttactttggaccagagcatgcccaagttctttctcgtcacttgcttcattcaagc
ttgccaggtctgactaggatggaacagatgtcattgatggccttggcagatactattgct
actactagtactgacattggagaaagcagggacagaagccagggtggagaaactcttgat
gagtgcggtttaaaatttttattagctgttcgacttcacacatttctaacaacttcactt
cctcctgtacatcgagctcagctgcttcaccaaggtttatctaccagtcattttgcctgg
gcatttcattcagtagcggaagaagaactactgagcatgctccctgcaatgcagaaaggg
gatccaacgtggtcagagctcagagctatgggtataggatggtgggttcgaaatatccat
agcttgcggaaatgcatagaaaaggtagccaaagcagcctttcaacgaaacaatgatcca
cttgacgcagccattttttaccttgcaatgaaaaagaaggctgtgatctggggattgtat
agatcccaaaaagacaccaaaatgacgcagttttttggaaacaacttctctgaggacaga
tggcgtaaagcagcattaaaaaatgctttctctttgcttggcaaacagcgttttgaacac
tctgcagcatttttcttgctggcaggacacttaaaagatgcagtggaggtctgtcttgaa
aaactgaatgacattcaattggctcttgtaatttcaagactttatgagtcagaatttgaa
gtatctagtacttataaatctgtactacagaagagaattttgggaagtgtgttttctgga
aaggagagcacaggaaacatgtacaatgatccttttctgagaagtatgggttactggatt
ttggaggattatagcaaggctcttgacactttgattaaacattcttttgaagatgaagga
gatgtaggagatggctcagcaagctgtaatcctgcagtgtttaacttctacaactactta
agaacacatcctctccttctgagacgtcattttggctcttctgatgcctcttccacacac
atgtgcctaacagtggaaaatggattagctgacaaaatcaacctagatgaaaggcggctt
ttcttcaccactgcatatgctcatttaaaagctggttgtcctatgttggccttagaagtg
ttatcaaagatgcccaaggttgtcaagaggtcaaagccattctgtggatcccccagctta
atggatactagtaaagatttctcaccatcttctcctcttaaagagttggaaataaaagat
gagtcttccagtattgattggtcacagccagctttgaatgatctagggtcatcttcagac
tgctcatcaggaaaacattcgagttcaactctttcatttgactggagccagccaaatata
gtattccaagacgatgaaggcttgaagctacagttggacagtgatgaaggtgatgagaat
gaagattcttccctggtaatgaaagaactaaaacctctgaagaaaaatgaaaaatcctat
gaaacaagttctagctacacggaatcttttagcatagttgatgaaaaagatattctaagt
ccatcagaagatataatttctgcacagctgaagtttagagcatgcctgaaaattcttaca
gtagagcttcgtacgttgtccactggttgtgaggtagatggtggaaaattgaggtatcag
ctttatcagtggcttgaaagggaagtgatagctcttcaaaaaacctgtgattatagtgtt
gaaatagatgaagtgcagtctggagttagcatgatgccagaggaagctgcattacatgga
aacactgtagacttaactgaccagcaaaaaaacatgctgcagaaaggaaactttcagaaa
agacgtcaatggcttctgaaataccagtctctcctgcgaatgttccttagttactgtgtt
ctccatggctctcacggtggtggtttggcatctgtcagaatggagttaattctgctgttg
caggaatctcagcaggaacagtcaatacagataccatccagccctgttctagagcaaagc
tccgtacctctcctatttgcttgcacagctagtgccaaaacagtggtggctaatccactg
ttacatcttggtaacttgactcatgatatcttacatgccataataaaccttgattcaccg
cctcatccagatacacagaataataagatatatgtaatgcataacttagcagcatcactt
tcggcttgcatctaccaatgtctttgtgatggccacagttacagctcatttcaagcaaat
cagtttactgggacagtttatcagacagtgctgttagctcagcgcaattctctaagatca
accttggaagaaacagtgactcccaatacaccaccagctcagtggccaggaataacagct
ctggtacgtctcttgaattctgctggtgaggaagctcagccaggactcacagtcttactt
tgtgaaattctaactgcagtttatctgagtctcttcatccatggcctagcaacacattcc
agcagtgagttgtatagaattatgactcatccacttaacaacaaaatgtggtctgcaatc
tttggaggaggagctcatacacctatcaaaggacagcagcaattgaagacaaaaactggt
aggcacttcccaatgcctagcccacatcaggtagtagtgttctccatggaatgcgtgggg
ttttcgaaatcccttactaccttcagtactcatagtcctaccaagtctgcagatgatgga
gagaaacagcaaaaatgtttcaagctttcatcaacaacctctccgaaagagagttctcgg
gcagctgccgtgccatggttagaccaagaatctccatcttacaaagaaagatttattcct
cctgagcttagtatttgggattatttcattgccaagccttttcttccatcacaaagtaga
gtggagtatgactcagaagagagtcaagaaagtggtgaagatgatgatgatattgatgga
gacgcgtttgcagcaaattcaaataatcaagagcatttgaatgctaattcatacagttgg
tcactgatgcgattggcaatggttcaactggtacttaacaacttgaagattttctaccct
ttggctggacacgatctttcagagcttccagttagctcaccagtatgccatgcagttctg
aaaacactacagcgctgggaacaagttcttcttcgacgtcttgagctatatggtggtcca
cctcaacattatatttcagttcatgcttctgaggatgccctagctgctggtcctgcattg
cttcgccataaaactttgcttgagcctgcaaacactccattcagatctaacagtcatgtt
gccttatctgtgaagaggctctggcagtacttggttaaacaggaagaagtccaggaaacc
tttatcagaaatatttttacaaagaggcgatgcttaaatgagtcattagaggaccatagt
gacaccttgaaaaactctgtggtggaggagcccatcgtcaataagatagaaacagattta
ggatacccaggaggcaaggcaagaataattcacaaagagtctgacatcattactgctttt
gcagtcaataaggcgaatcggaactgcattgcaatagcatcgagtcatgacattcaggaa
ttagatgtttctgcaatactggctacacagatctacacctgggttgacgatgatgtggaa
gtagaaaataaaggggctgatgatttcttggttatccatgctcgtgatgatctggtaaat
gttcagggaaccactccatacactcacagtaatcctggcacacccattaatatgccttgg
cttggtagtacacaaactggcaggggtgcatctgtggaatattccaataaatttaatgga
atcagaaaggaattggcaagaaaagagatgctcaagaaggctattaataatgtcagaaga
atggcttctcatccaacattaccatattatctgacaggtgctcaagatggcagcgtaaga
atgtttgaatggggtcatgcacagcaaatcacgtgttttcggtctggtggcaactcgagg
gtaactcggatgaggttcaattatcaaggaaataagtttggagttgttgatgctgatgga
tatataagtttgtatcaaacaaattggaaatgttgccctcttacagggacctcaccaaaa
ccgtatttgacctggcagtgccataacaaaacagccaatgactttgttttcatcagttca
tcgtctttgatagccacagctggcttgtcttcggacaacagaaatatttgtctttgggat
acgttggtctcccccaccaatagtctggtgcatgcttttgtctgtcatgatagtggagca
actgttctagcatatgctccaaaacatcagctgctcatctctggagggagaaaaggcttt
acgtgtataattgaccttcgccaaaagcagcagcaacagttactccaaagccatgattct
caagtcaaagcaattgctgtcgatcctacagaagagtattttgtcacgggatctgctgaa
ggcaacataaaggtatggagtctgtctacgtttaatcttctgcacactttcatcaatgag
cattctcgacagtctctcttcagaaatattgggacaggagtcatgcaaattgaaacagga
ccagcaaatcacatactctcctgtggtgctgatggaacagtaaagatgaggatcttgcct
gatagattcagcccatttaacgaagtgttaaaaagtgatgtcaaattcatgatgtaa
DBGET
integrated database retrieval system
