Lagopus muta (rock ptarmigan): 125686536
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Entry
125686536 CDS
T09141
Symbol
ZSWIM6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6 isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125686536 (ZSWIM6)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125686536 (ZSWIM6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
125686536
NCBI-ProteinID:
XP_048786589
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All DBs
Position
Z:19995763..20107432
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AA seq
1157 aa
AA seq
DB search
MAERGQLPPPAKRLCCRPGYGSGCRPGGRVGGAGPGSGALCAGPSSAAAAAALGLLPLGK
TQSPESLLDIAARKVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTG
SEDPAAAPVGAAAAPGGAADAADENRLPFRRGIALLDGGCVDNVLQVGFHLSGTVTEPAM
QSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISET
LFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDE
NCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFM
ADPRLALWRQQGTTMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVC
PWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSD
LYTNYCYHDDSENSLFDSHGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRR
QQQKQLEVFRAQKKELLHKGVTSITNLEGWVGHPLDPVGTLFSSLMEACRVDDESFHGFS
DFMENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYAQEKVCRN
EEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLL
PHDAELAYKTALRAMRLLVLESTAPSGDMSRPHHIASVVPNRYPRWFTLSHIESQQCELA
STMLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLEL
GLQVMRMTLSTLNWRRREMVRWLVTCATEVGVYALDSIMQNWFTLFTPTEATSIVATTVM
SNSTIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVL
DAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACAL
SHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPL
RQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQ
IYKGKKKLMMLVRERFG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggtcagctccctcctcccgcgaagcgcctctgctgcagacccggctac
ggctcaggctgcaggccgggcgggcgggtgggcggcgccggccccggcagcggagcgctc
tgtgccggccccagctccgcagccgccgccgccgccctggggctgctgccgttgggcaag
acgcagagccccgaatccctgctggacatcgcggctcgtaaggtggcggagaagtggccc
ttccagcgggtggaagagcggtttgaacggatcccggagccggtgcagcgcaggatcgtc
tactggtccttcccccgcagtgagagggagatttgcatgtactcctccttcaacaccggc
agcgaggaccccgccgccgctcccgtgggggccgccgccgcgcccggcggggccgcggac
gctgccgacgaaaaccgtctgcccttccgcaggggcatcgcgctgctcgacggcggctgc
gtcgataacgtcctgcaagtcggtttccacttgagtggcacagtgacagagcctgcaatg
caatcggagccagaaactgtttgcaatgtagctatcagctttgatcgttgcaagattacc
tcagtgacctgcagctgtggaaacaaggacatattttattgcgcccatgttgtggcactt
tctttatatcggatccgtaagccagatcaggtcaaactgcatcttcccatttcagagaca
ctctttcagatgaacagagaccaactacaaaaatttgtacagtatttgatcacagtgcac
catacagaagttttgccaactgctcaaaagttagcagatgaaattctttctcagaattca
gaaatcaatcaagtccatggtgctcctgacccaacagcaggtgctagcatagatgatgaa
aactgctggcatttggatgaggaacaggtccaagaacaagttaaactcttcctctcacag
ggtggataccatggatcagggaagcagcttaacttgctttttgcaaaggtgagagagatg
cttaagatgagagattcaaatggagctcgcatgttgacgttgataacagagcagttcatg
gctgaccctcgtctggcactttggagacaacaaggaactacaatgactgacaagtatagg
cagctctgggatgaactgggtgctctgtggatgtgtatagtcttaaatccccactgcaag
ttggagcagaaggccagttggctaaaacagctgaaaaaatggaacagtgtggatgtttgt
ccctgggaagatggaaaccatggaaacgagctgcccaatttaaccaatgctttgcctcag
ggtgcaaatgctaaccaagattcatcgaacaggccccatcggacggtgttcactcgagcc
attgaggcgtgcgatcttcactggcaggacagccacttacagcacattatcagcagtgac
ctatacaccaactactgttaccatgacgactctgaaaactcgctctttgactctcacggg
tggcccctctggcatgaacatgttcctacagcctgtgcaagggtggatgcattacgatct
catggatacccaagagaagcactgaggctagcaatagctattgttaatacactaagaagg
cagcagcagaaacaactggaagtgttccgggctcagaagaaagaacttctccacaaagga
gtaacctcaataacaaatctggaaggctgggtgggacatcctttggatccagttggcact
ctcttcagtagcctgatggaagcctgcagggtggatgatgagagcttccatggattctca
gacttcatggagaacatggggcaatgcaaatctctggagtaccagcacctgcctgcacac
aagttcttagaagaaggggaatcgtatttaacactggctgtggaagtagcattgataggg
ctgggacagcaacgaataatgccagatggcttgtatgcacaagagaaggtttgtcgaaat
gaggagcaactcatttctaagctacaggaaattgaattggatgatactctggtgaagatt
tttcgaaaacaagcagtcttcttattagaagctggaccatatagtggattaggggaagtc
attcatcgagagagcgttccaatgcacacatttgccaagtatctcttcacctctctccta
cctcatgatgctgaattggcatacaaaactgcactgagagccatgcggttgctagtattg
gaatctacagctccttctggagacatgtcccgcccacaccacattgcatcagttgttcca
aaccggtatccccgctggttcactctaagtcacattgaatcccagcagtgtgagctggca
tcaaccatgttaacagcagccaaaggtgatgttcggaggctggaaacagtgttagaatcc
atacagaaaaacatccactcttcatcacacatcttcaaacttgcgcaggatgcatttaaa
atagctacactcatggacagcttgcctgacatcactcttctaaaagtttctctggagttg
ggccttcaggtgatgcggatgacgctgtcaacactgaattggcgacggcgggaaatggtg
aggtggctggtaacatgtgcaacagaagtaggtgtttatgcactggatagcatcatgcaa
aactggtttacactgttcactccaactgaagccactagtattgttgctacaacggtgatg
tccaatagcaccatcgtccgtctgcacctggactgccatcagcaggagaagctggccagc
agtgctaggacgcttgctcttcagtgtgccatgaaggatcctcaaaactgtgccctctct
gcactgaccttatgtgaaaaggatcacatagcttttgagaccgcttaccaaatcgttcta
gatgctgctacaactggcatgagctactcgcagctttttactatagcacgatacatggag
caccgcggctaccctatgcgggcctacaagctggccactttggccatgacacatctcaac
ctgagttacaatcaggacacacaccctgccattaatgacgttctgtgggcatgtgcgctc
agccactcccttgggaaaaatgagctagcagctataatacctctggttgtcaaaagtgtc
aaatgtgcaacagtactgtcagacattttgcgtaggtgtactttgaccactcctggcatg
gtaggacttcatggaaggaggaactctggtaagctcatgtcactggacaaagccccttta
aggcaactcttggatgccacgattggagcctacattaatacgactcattcacgtctcact
cacatcagccctcgacactacagtgagtttatagagttcctcagcaaggctcgagaaacc
ttcttaatggctcatgatggacacatccagtttacacagtttattgacaacctaaaacaa
atctacaaaggcaaaaagaaactgatgatgttggttcgcgagcggtttggttga
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