Lagopus muta (rock ptarmigan): 125686606
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Entry
125686606 CDS
T09141
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
lmut
Lagopus muta (rock ptarmigan)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank_5
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
125686606
NCBI-ProteinID:
XP_048786731
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All DBs
Position
Z:66399641..66482367
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AA seq
962 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSITSLKTIPELCRRCDSQNEDRSVSSSSWNCGGSALIGNA
QKPTGIADACNKFRPVKRVSPLKHQPESSENNESDDQKNQKGEYQKGSDSQPAPPNDDQS
PGEGENLKSKHIEPTVLLGELEHYDLDMDEILDVPYIKSNQQLVPFTKVAPEKKISGVCS
TVNGVSGKTCSTESTEPAGVTQFCVLSPVKGSQLRKTQPIVVDQHKHLTEELELSQPLAK
CSSVHESEAQGKGFLCRTFVGPQTHKTGKTMPNCHLRTFHLQTAVAESKQLEELNMSWSR
AGGPEERSEEVKKFKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLHVAASKGHAEC
LQHLTSLMGEDCLNERNMEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPSLIH
YAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQTLVEYGANVTM
QNHMGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQ
LLEAQRSEGKSLPTSTSSPSSPASGKPQWKPSEADELSPPKSKLNAQDGIQILGSLGTSS
RTRAKMKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDAHASSKNVKKILPEKRELKLA
RLRQLMQRSLSESDTDSANSEDHKNTPVKRTDKLRPQPIVESVESAESLHLMIKKHTSAA
GRRFPFSTRASKSVDGHSPSPTSESSDPDNEAQYQSGTVPQGQFCGDSSPSSADGAAAQK
VATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVELAEAELNEEKDKERGKALSRAPPT
TGEPSGDQLKRPFGTFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFSSLGRKTADSKGN
PAALTKGRNKPGPCFSHTNLSSSTLNEEHLCNYAWHDNISRKSQKSYSQKSSEETDLQEL
FL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgagatagactttagtgatgatatatcgtac
tctataacttctctcaagactatcccagaattatgtagaaggtgtgattcacaaaatgaa
gacagatcagtttccagcagcagctggaactgtggtggctctgctcttatcggaaatgca
cagaaaccaacaggaattgcagatgcgtgcaataaattcagaccagtgaagagggtttcc
ccattaaagcatcagccggagagctctgagaacaatgaaagtgatgaccaaaagaaccag
aagggtgaataccagaaaggcagcgactctcagcctgcacctccaaatgatgaccagagc
ccaggagaaggagaaaaccttaaaagcaaacacattgagcctactgttctgcttggggag
ctggagcactatgacctggatatggatgaaattttggatgtgccttacattaaatcaaat
cagcaacttgttcctttcacaaaggtagcccctgagaaaaaaatttctggtgtatgctca
acagtgaatggtgttagtggcaagacctgctctacagagagcacagagcctgctggggtg
acacagttctgtgttctctctcctgtgaaaggctctcagctgagaaaaacgcagcccatt
gttgttgatcagcacaagcatttaacagaagaattagagctttcccagcctttagcgaag
tgtagctcagtccatgaatctgaagcccagggcaaagggttcctctgtaggacatttgtt
ggtcctcagactcacaaaactgggaagactatgccaaactgccacctgaggacttttcac
ctgcagacagcagtggcagagagcaagcagcttgaggaactgaatatgagctggagcaga
gcaggggggccagaagagaggagtgaagaggtgaaaaaatttaagagcatcttaaacatt
gtaaaggaggggcaaatatcattactgccacatttagcagcagataatctggataagatt
catgatgaatgtgacaacaatctgttgcatgtagcagcatcaaaaggacatgcagaatgc
ctgcagcatctcacttctttgatgggtgaagactgcttgaatgaaagaaacatggagcag
ctaactccagctggtttagcaataaagaatggtcagctggagtgcgttcggtggatggtg
agcgaaacagaagctattgcagaactgagttgctcaaaagatcacccaagccttattcac
tatgctggctgctatggtcaggagaaaatccttctatggcttcttcagtttatgcaagaa
caagggatttcactggatgaagttgatcaggatggaaatactgctgttcacatagctgct
caacatggctatctaggatgtatacagacattagttgaatatggagcaaatgtcaccatg
caaaaccacatgggagagaaaccctcacaaagtgctgagcgacatgggcacacgatgtgt
tcccgctacctagtggtggtggagacctgtatgtcattggcctctcaggttgtcaagcta
acaaagcaactaaaggagcagacagtagaacgtgtgacattgcagaaccaactccaacaa
cttttagaggcccagcgatcagagggcaagtctctgcccacatccacaagctcaccatca
tcccctgcctctggcaaaccccagtggaaaccatctgaagcagatgaattgtctccaccg
aaaagtaaattgaacgcccaagatgggattcagattcttggcagcttgggaacttctagt
cgcactcgagccaagatgaaagatgaggactcagataaaatcttgcgccagttgttggga
aaggaaatctctgaaaatgtctgtatgcaggaaaaactgaccttggaatttcaggatgct
catgcatcctccaagaacgtgaagaagattttgccagagaaaagggagctgaagttagcc
agactgaggcagcttatgcagaggtctctcagtgagtctgacacagactcagctaattct
gaggatcataagaacactcctgtgaaaagaactgacaaactaaggcctcaacccatagtg
gaaagtgttgagagtgcagagagtttgcacctgatgattaagaagcatacttcagcagca
gggcgccgcttcccttttagtaccagagcttctaagtcagtggatggccacagcccttcc
cctacttcagagagcagcgatccagataacgaggctcagtatcaatctggtactgtacct
cagggccagttttgtggagacagctctccttccagcgcagacggtgctgctgctcaaaag
gttgccaccagccctaagagtgcacttaagtctccatcttcaaaacgcagaacctcacaa
aatttgaaactcagagtgactttcgaggagcctgtggtgcaggtggagctagctgaggca
gagctaaatgaggaaaaggataaagaacggggcaaagcactttcacgggctccacccacc
actggggaaccatcgggggaccagctaaaaaggccttttggaacctttagatccataatg
gagacactgagtggtaaccaaaataataacaacaactgtcaaacggcaaacctgatcaaa
acctcatcgacgctgcctttttcgtcattaggaagaaagacagcagacagcaagggaaac
ccagcagctctgacaaaaggaagaaacaagccagggccttgcttcagccacaccaatctt
tcctctagcacactgaacgaagaacatctgtgtaactatgcttggcatgataacatcagt
aggaaaagccagaagtcttacagtcaaaagagttcagaagagacggacctgcaggaactc
ttcctctaa
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