Lagopus muta (rock ptarmigan): 125686713
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Entry
125686713 CDS
T09141
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut02010
ABC transporters
lmut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125686713 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125686713 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125686713 (ABCA1)
Transporters [BR:
lmut02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125686713 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
125686713
NCBI-ProteinID:
XP_048787000
LinkDB
All DBs
Position
Z:55102246..55194117
Genome browser
AA seq
2262 aa
AA seq
DB search
MMAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNK
AMPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQD
TSIKDVQTVLAKLRKLGNFSGLDMKLRDFLVENETFSDFLHRNVSMPSSAVEELLNAEVN
LQKVIVSGYRMQLRDLCNSSALSEFLTVQNRSVAMDSEAFLCTLPKETLHAAEQSFRANL
NPLKPLQRQFFFNSSLRDLSETVEALRDSLGKLVKELLSMKSWSDMRQEVMFLTNVNASN
SSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYC
NELMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPAIRKIMAEVNRTFQELGVFRDLGGM
WEEISPKIWTFMESSQEMDLIRTLLKSKDLWDLHLPASNWTVEDVAHFLSKHPEEFETDN
GMVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVF
TEIAPNSTELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQD
VVEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKG
IVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVV
FVFLSIFGIVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIF
ASLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVM
TWYIESVFPGQYGIPRPWYFPLTKSYWFGEESQDRHHLHPDQKGPSEVCKEEEPMHLSLG
VSIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAF
ILGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMD
VGLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR
QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSL
SSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVED
IGHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDA
ETSDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQ
MKGWKLSQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLE
LQPWMYDEQYTFISNDAPEDAGTQKLLDALLNKPGFGTRCMQGHSIPDTPCTVGQKEWTT
ASVPDSVLEILSGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSHVLPPSNEVTDAIKQVK
KILELAQGSSGDRFLNNLASFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNEEDEDVNRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSQSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTLVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttttggacgcagctgggattgctgctatggaagaacttcacctacagaaga
agacagactttccagctgctgatcgaagttgcttggcctctgtttatcttcttcatcctg
atctctgtaagactttcatatccgccctacgaacaacatgaatgtcacttcccaaacaaa
gctatgccctcagcaggaacattgccctggatacaggggatcatctgcaatgccaacaac
ccttgtttccgctacccaacaccaggggaatcccctggtattgttggaaacttcaatgca
tccattgtttcccgcctattttcagatgccaaaaggttactcttgtacagccaacaggac
acaagcataaaggatgtccagacagtcttggcaaaactgcggaaactgggaaacttctct
ggcttagacatgaagcttcgggatttcctggttgaaaatgagacattctcagactttctc
catcgtaatgtgtccatgccatcttctgcagtagaggagctactgaatgcagaggtcaat
ctccagaaggtcatagtgtctggttaccgaatgcagctacgagatctctgcaatagctca
gcgctgtctgaatttcttacagtccaaaatcgctcagtggccatggactctgaagccttc
ctttgcaccttaccaaaggaaacactccatgcagctgagcaatccttccgtgctaacctg
aatcctttgaagcctcttcagagacagtttttctttaattcctccttgcgggatctgtca
gaaactgtggaggctttgagggacagcctgggaaagcttgtcaaggagctgctgagcatg
aagagttggagtgacatgagacaagaggtgatgttcctgaccaatgtgaatgcctcaaac
tcctctacacagatctaccaggctgtgtcacgtattgtgtgtggccaccctgaaggtgga
gggctcaagattaaatcgctcaactggtatgaggacaacaattacaaagcactttttgga
ggcaacagcactgaagatgatgtaactaatttctatgataactccacaacaccctattgc
aatgagctgatgaagaatctggaatccagcccactttccagaattatttggagggctttg
aagcctttgctgattgggaaggtcttgtacactccagacacaccagccataaggaagatc
atggctgaggtgaacaggacattccaggagctgggagtgtttcgtgacctcggggggatg
tgggaggagataagcccaaagatctggacatttatggaaagtagtcaggaaatggatctg
attcggacgctgctgaaaagcaaggatctctgggacctgcacttgccagcttccaactgg
acagtagaggatgttgcccatttcctgtcaaagcatccagaagagtttgagacagataat
ggaatggtgtacacctgggtggatgctttcaatgagacagatagagctattcagaccatc
tcccgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccgg
cttataaataagtctttggagcttctggatgaaaggaggttctgggctggtgttgtcttc
actgaaatagctcctaacagcacagagctccctcagcacgtgaaatacaaaatacgcatg
gacattgacaatgtggaaaggaccaacaagattaaggatgggtactgggatcctggtccc
cgtgctgacccctttgaggacatgcgctatgtgtggggaggttttacctacttgcaggac
gtggtagagcaggccatcatcagggtgcaaacaggcacagaaaagaagacaggagtttat
gtgcagcagatgccttatccatgttatgtggatgacatatttctgcgtgtcatgagccgt
tctatgcctctcttcatgactctggcctggatctattcagtggctgtgataattaagggc
attgtgtatgagaaagaagcccggctaaaggaaacgatgaggattatgggccttgacaat
ggcatcctttggctaagctggttcattagcagcctcatccctctcctcatgagtgcgggt
ttgctggtgctgatcctcaagatggggaatctgctaccctacagtgaccctagtgtggtg
ttcgttttcctctcgatctttggcattgtgaccatcctgcagtgctttcttatcagcacc
gtgttctccagggctaacctggcagctgcctgtggaggcattgtgtatttcacactatac
ctaccctatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatcttt
gcgagcctgttgtcacctgtagcctttggctttggttgcgagtactttgcactgtttgaa
gaacagggagttggtgttcagtgggacaacttctttgagagcccactagaagaagatggc
tttagcatcaccacatctgctgtgatgatgttgtttgacacattcctctatggggtcatg
acctggtacattgagtctgtcttcccaggccagtatggaattcccagaccctggtacttt
cctttgacaaaatcctattggtttggtgaagaatcccaggacaggcatcaccttcatcct
gaccagaaggggccctcagaagtctgcaaggaggaagagcctatgcatctgagtcttggt
gtctccattcagaacctggtgaaggtttatcgtgatggcaagaaggttgctgtggatggt
ctcacactgaatttctacgaagggcagatcacatcatttctgggacataatggagcaggg
aaaaccactaccatgtccatcttgactggcttattcccccctacttctggtactgccttc
atcctgggtaaagatatccgctcggagctcagcaccatcaggcaaaacttgggtgtctgt
ccacaacacaacgtgctgtttgacttgctgactgtggaagagcacatctggttctatgct
cggctcaaagggttgccagaaaagaaggtaaaagaggaaatggagcaaatggcaatggat
gttggtttgcctcacaaattgaaagccaggacaagcaaactctctggtggcatgcagagg
aagctctcagttgccttagcctttgttggtggctccaaagttgtcattctggatgagccc
acagctggagtggatccttattctcggagagggatatgggagctgcttctgaagtatagg
caaggccgcactatcattctttccacacaccacatggatgaggcagacattctgggggat
cgaattgctatcatttctcatggcaagctctgctgcgttggttcgtctcttttcctgaag
aaccaactgggaacaggctattacttgacccttgtcaagaaagatgtggattcctctctg
agctcctgtcgaaacagcagcagcacagtgtcctatctgaagaaggatgacagcgtctcc
cagagcagctctgatgcaggccttggcagtgaccatgaaagtgacaccctgacgatagat
gtctctgcaatttcaaatctgattacaaaacacgtccctgaggcaagactggttgaggac
attggtcatgagttaacctatgtcttgccatacaaagctgctaaagagggagcttttgtt
gagctgttccatgaaattgatgaccgtctttctgatcttgggatttccagctatggcatt
tctgagaccactttggaggagatcttcctcaaagtggctgatgatagtggtgtggatgca
gaaacctcagatgggacattgcctgccagaaggaacaggcgtgcctttggagacagacag
agctgccttcgtccatttacagaagatgatgcatttgaccctaatgattcagacattgat
ccagcagaatccagagagactgaccttctcagtggcatggatgggaaaggttcctaccag
atgaagggctggaagctctcccagcaacagttcgtggctctgttgtggaagagactgctt
attgccaagagaagccggaagggcttctttgctcagattgtgctgccagctgtctttgtg
tgtattgctctcatgttcagtctgattgttcctccctttggaaagtatcccagcctggaa
ttacagccctggatgtacgatgagcagtatacttttattagtaatgatgctccagaagat
gcaggcactcagaagcttttggatgcccttctcaataaacccggctttggaacacgctgt
atgcaaggacactccatcccagacactccttgcactgtgggacagaaggagtggaccact
gcttcagtcccagactcagtcctggaaatcttgagcggcaactggagcatggagaaccct
tctccatcttgcgagtgcagcaatgagaagatcaagaagatgcttcctgtgtgtccccct
ggtgcaggcgggctgccacccccacagcgagaacaagacactgctgacatcctccagaat
ctcacaggtcgcaatatatcagactatctagtgaagacctacgcacagatcattgggaaa
agtttaaagaacaaaatctgggtgaatgagttcaggtatggaggcttttccttgggagcc
agaagttcccatgtgcttcctccaagcaacgaagtcactgatgccattaaacaggtgaag
aagatcttggagctagcacaggggagttctggcgatcggtttctcaacaacttggcaagt
ttcatgaaaggactggacacaaagaacaatgtgaaggtgtggttcaacaacaagggttgg
catgccattgcctccttcctgaatgtgatcaacaatgccattcttcgggccaacctgcag
cagggcaaaaaccctagtgcttatgggatcaccgccttcaaccacccactcaacttgacg
aagcaacagctctctgaagtggccctgatgaccacgtctgtggatgtcctagtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggtgttccttatccaggag
cgtgtcagcaaggctaagcacttgcagtttatcagtggtgtgaagcctgtgatctactgg
ctggccaactttgtctgggatatgtgcaactacatcgttccagccacactcgtcatcatc
atcttcatctgcttccaacagaagtcctatgtatcctcttccaacttgcctgtgctcgct
cttcttctgtttctctatggttggtctatcactcctctgatgtatccagcctcctttgtg
ttcaaaatccccagcacagcatatgttgtgctgaccagtgtgaatctcttcattggcatc
aatggtagtgtggccacctttgtcctggaactcttcaccaacaacaagctgaacaacatc
aatgacatcttgaagtctgtctttctcatcttccctcacttctgcctggggcggggtctc
attgacatggtgaaaaatcaggctatggcagatgctctggagaggtttggcgagaatcgt
ttcgtgtcccctctgtcgtgggacctggtgggaaggaacttgtttgccatggcagtggag
ggtgtagtcttcttcctcattactgtgctcatccagtacagattcttcatcaaacccagg
cctgtctatgccaagttacctcctgtgaatgaagaagatgaagatgtaaacagagaaagg
cagagaataataagcggaggaggacagagtgacatactggaaatcaaggagctgaccaag
atttacagaatgaaacgaaaaccagcagttgacaggatatgtgttggaatccctcctgga
gagtgctttggacttctgggagtaaatggtgctggcaagtcatccactttcaagatgcta
actggtgatacagatgtgacaggaggagaagcttttctcaaaggaaacagtatcctgtcg
aacatccaagaagtccatcagaacatgggctactgtccacagtttgatgctattaatgaa
ctgctgacagggcgagaacacttggagttctttgcactcctcagaggtgttcctgagaaa
gaagtttgcaaggttggcgaatgggcaattcggaaactgggccttgtgaaatatggagaa
aaatatgcgggcaactacagtggagggaacaggcgcaagctctccacagcaatagccctc
attggagggccacctgtggtattcctggatgagccaacaacagggatggatcccaaagca
cgccgtttcttgtggaactgtgctctgagtgttatcaaagaggggagatcggtggttctt
acatctcacagcatggaagagtgtgaagcattgtgcactcgaatggcgataatggtcaat
gggcgattcaggtgtctgggcagtgtccagcatctaaagaacaggtttggagatggttat
accatagtggtgcgaattgcaggggctaacccagacttgaagccagttgaggaattcttt
gggcacgcctttcctggaagtgtcttgaaggagaagcatcgcaatatgctgcagtaccaa
cttccctcttcgcagtcttcactggccagaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactctgtttctcagaccacacttgaccaagtattcgtaaat
tttgctaaggaccaaagtgacgatgaccacaccaaggacctgtcattgcacaaaaaccag
actctggtagacattgcaatccttaattcctttctgcaagatgagaaggtaaaagaaagt
tgcgtgtga
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integrated database retrieval system
