Lagopus muta (rock ptarmigan): 125686735
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Entry
125686735 CDS
T09141
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125686735 (TAF1C)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125686735 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
125686735
NCBI-ProteinID:
XP_048787091
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All DBs
Position
Z:10017536..10021919
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AA seq
935 aa
AA seq
DB search
MEFPGVLFPSYFGCGPPKDEGGMAPAAGWGERGKVLEAGPGQRQVLPPFVPLRSHEGESW
APAEAAAVPLLPPNMGCWVPTVTPQDILYHGILHRKLRTGRSGAALDFAKQLGHFFVDHP
EDAFSSLGRLLHKNFYLGDSRLRKRSAQDTTIRMTSLVENINHMEARRGCPQHQFTSRLR
LFSHLCRDWLFEVPLGLLADCVHEELLLQWTSLLFDDSSTGGALAWLPPQDASSRVGRLV
YPGGMAMNHLYFQDVVLEEQPRARGLPVQFELNGRIRQVAAARVDGQDFVGVRSDYHCGV
WRMPGKTGAAPSPLQVIHTDVPASCLTVSPYLSGELSVCTQSGAVYLWNIETGLQRLRHD
TQTLFFRDHSPWRWSDFTAHPRVLSCADRTGILCLDARAPTSCHFDFFKVGEEAKCEQGE
RVVLPMYLGRAHPCQHLVATQFAVYLLDERLPLVPVLKWSHMMKAPPLFADIVPGESGRS
HKALLGTSHTQELLLLQYTGEKPGGDQMACQLAGPPQQLHSIASCLPHLPTQLPHQHHLL
QKRLSIPAAGLAAVQHEQGEQESLLVFQLSEAGDVFYQMLRHEAAPSPVPDQGDEAEPAP
TPNKEDEAAASPGSPILFGSEEEEQEEEEEQTFYLSNLEVIINDEEEEEEEVVTTPAATE
EPEPLARPKPAPDVPSAAAALRYRRWLRALLQAWMGSPASSCRSGPPTLSQRRLFTRKEL
SEMAPSVLQQYQLQLRQAMCERGRIQRWEPAPEPPSPAPSLEPNALSARLTAAWRGEWGA
VGPAGSTLQRQQALRERRRRQKRSRAHRSLSASFTSSITYQSELSELSEGATPRTPPSTP
REVVVSSLPGTPPPPPTDILLSSQELRSRGIPKERRRTLRDYLSVWAEGPQDPPEAPSSI
TVQRCIPSSQSQLSSSQSQLSSASQPRRKRPRMGF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgggagtgcttttcccttcttacttcggctgcggcccccccaaggacgag
gggggcatggctccagccgccggctggggagagcgcgggaaggttctggaggccgggccc
ggacagcggcaggtgctgccaccgtttgtgcctctccgcagccacgagggcgagagctgg
gcgccggccgaggccgcggcagtgccgctgctgccgcccaatatgggctgctgggtcccc
acagtcacccctcaggatatcctctaccacggtatcctgcacagaaagctgcggaccggg
aggtctggggctgcgctggactttgccaagcagctggggcacttctttgtggatcacccc
gaggatgccttcagctccctggggcgactgctgcacaagaacttctacctgggagactcc
aggctcaggaaacgcagcgcccaggacacaaccatccgcatgacatccctggtggaaaat
atcaaccatatggaagccaggcgtggctgccctcagcatcaatttacctcccgcctgcgc
ttgttctctcacctgtgccgggactggctcttcgaggtgcctctggggctgctggctgac
tgtgtgcatgaagagctgctgctacagtggaccagcctgctctttgatgacagttccaca
gggggagcactagcctggctgccccctcaggatgcaagcagtcgtgtgggacgcctggtg
taccctggtgggatggccatgaaccacctctatttccaggatgtggtgctggaggagcag
cctcgggcacgggggctaccagtgcagtttgagcttaatgggcgcatccggcaagtagct
gctgcccgggtggatgggcaagactttgttggcgttcgctctgactaccactgtggtgtt
tggaggatgccaggcaagacaggagctgcccccagcccactgcaggtcatccacactgat
gtgccagcctcctgcctcactgtcagcccatacctgtctggggagctgtcagtctgcacc
caaagtggagccgtctatctgtggaacattgagacagggctgcagcgtctccgccatgac
acacagaccctgtttttccgggaccactcaccctggcgctggagtgacttcactgctcac
ccgcgggtgctgagctgtgctgaccgcactggcatcctgtgcctggatgctcgggccccc
acgagctgccacttcgacttcttcaaggtgggtgaggaagccaagtgcgagcagggtgaa
cgcgtagtattgcccatgtacctgggtagggctcacccctgccaacacctcgttgccacc
cagtttgccgtgtacctgctggacgagcgcttgccgttggtgcctgtgctgaaatggtca
cacatgatgaaagcaccccctctgtttgctgacattgttccgggggagtctggaaggagc
cataaagcgctgctgggcacctctcatacccaggagctgctgctgctgcagtacacaggt
gagaaaccagggggcgaccagatggcctgccagctcgcagggccgccacagcagctacac
agcattgccagctgcctacctcaccttcccacacagctcccacaccagcaccacctgctc
cagaagcgcctcagcatccctgcagcagggctggctgccgtgcagcatgagcagggtgag
caagagtcccttctggtgttccaactctccgaggcaggtgatgtcttctaccagatgctg
aggcacgaagcagcaccctcacctgttcctgaccagggggacgaggcagaaccagctccc
actcccaacaaggaggatgaggccgcagcatcccctggctctcccattctgtttggcagt
gaggaagaggaacaggaggaggaagaagagcagaccttctacttgtccaatctagaggtg
ataatcaatgatgaagaggaagaggaggaggaggtagtgaccacgccagcagccactgag
gaacctgagcctcttgccaggcccaagcctgccccagatgtgcccagtgcagctgcagct
ctgcggtaccgccgctggctgcgggcactgctgcaggcatggatgggctccccagcatcc
tcctgccgatcagggccccctaccctcagtcagcggcgcctcttcacccgcaaggagctg
tcagagatggcaccaagtgtcctacagcagtaccagctgcagctgcgccaggccatgtgt
gagcggggccgcatccagcgctgggagccagccccagaacctcccagcccagcaccctcc
ttggaacccaatgccttgagtgccaggctaacagcagcatggagaggcgagtggggggcc
gtggggccagctggcagcaccctgcagaggcaacaagcactgcgggaacggcggcggagg
cagaagcgcagccgggctcaccgcagcctctcggccagcttcacctcctccatcacctac
cagtctgagctgtccgagctcagcgagggggccactccccgcactcccccgtccacccca
cgggaggtggtggtgtcctctctgcccggcacccctccaccgcctcccaccgacatcctg
ctgtcctctcaggagctgcgatcccgcggcatccccaaggagcgtcgccgcacgctgcgg
gactacctgtccgtgtgggccgagggcccgcaggatccccccgaggcccccagcagcatc
acggtgcagcgctgcatcccctcctcgcagagccagctctccagctcacaaagccagctc
tcctctgcctcgcaaccgcgtcgcaagcggccccgtatgggcttctga
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