Lagopus muta (rock ptarmigan): 125686978
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Entry
125686978 CDS
T09141
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125686978 (DENND4C)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125686978 (DENND4C)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
125686978
NCBI-ProteinID:
XP_048787627
LinkDB
All DBs
Position
Z:34068709..34149151
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AA seq
1950 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDASNLLDQEISRHESGPKAPITDIAVIIKSAGETVPEGY
TCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVVQAT
PYGRCANVNNSSASSQRIFITYRRAPSIRPQNSLAVTDICVIVTSKGETPPHTFCKVDKN
LNCGMWGSSVYLCYKKSVPASNSIAYKAGLIFRYPQENYESFPLSESVPLFCLPMGATIE
CWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLQLGLLTAVERKV
VTSKSINSNKCICLLSHWPFFDAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPSP
QRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILLH
SLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLYDPP
QDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLYPQLAAVHRKTQEGSAVE
MTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSLFDH
QGFLKSRDRAYAKFYTHLTKTQIFSSFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKG
DKVDVDSAEDARLIELDESQKSEHTVFIMPPEPPPDDGQDRAPKYSYKNFPRLDFKLFDR
PQELKLSFRKHPAGCSISNSPALMAKRTKQEIKTAHKLAKKFYVSPPQWAKCLFSHSYSL
WFICLPAYVRVAHPKVKALQQAYDILIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQAVR
VLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCLKKA
TQSPRISVISALRNTTGGSDGDMVSHGSVDSSNDANSGEHTVFVSDLVRLDSIDNHSSTG
CQSDQGYGSKDELLRDNGDNLHASETQVQEDISSKAEELIGDVCIEESDEKKQLNVEVHS
PADPPAWGNSIVKVPSGIFDCSGRKNSGETGSSLLSVTQDSVEDAVFGDAPPKKTSEKGQ
KRQKLFSERSCSFSSESKAGMLLKKGSLDLHSKEIAIMMGEDAKILTAALSGAKTSPCNT
SKSYSFDSAVDQQVSDKNGTWSCVTDSDWELEHRTSPVLEEPGEGQEHLENGRNENVTMV
EDMKTEQVAESKSQKVESKDATTKRNSFYGVVKPIEREDVEVGLDPLSLLATDCIQPRLP
EAEEKLVSPVAARNLADEIENYMNLKSPMSSKFPSMELHKPDRETEASGTFSHNQERRSS
LPLDHIPPPPESYENHRSPSVSRSKTFTGRPKQQMHPRVQKERSSSLTGLSRSSPHGSLG
SVVTTLSNLKLDNILSGPKMDVLKSGMKQAASVASKMWGVVTSAYSYSDDEAKNSPGDFN
FPAGFEDSILGDNLSSRTGVPGLIANELAQSTTSLGSSSSSGEAGRQHYNAGEVSFPRSM
KVPESEKSELSSSHNTSLSSIFQNYAMEVLMSSCSQCRACDALVYDEEIMAGWTADDSNL
NTTCPFCRSIFLPLLNIEFKDLRGSASFFLKQSTSGDSLQSSNTPLTTDVLEQKVLSSSA
VTDLISFSDHPHSSHTIAEESSSSTEQSEAAEEQSKDLRTMKMSANNPPKRGVSLTRSHS
VGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIERPNPLPVSVPYLSPLVLRKELESL
LENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLTSLA
QDSKLVYIQLLWDNINLHQEPGEPLYISWRNLNSSEKKPSTVAEDQQATHTLLENIKLSI
QHNNVVKPIHLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHKNLP
KDVLERMQKIDAPPSSRVECCRKYFGAPLI
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggcccacgggtggctgactattttgtagtggcaggactgactgat
acagatgcttcaaacctcttggaccaagaaataagccgtcatgaaagcggtccgaaggct
ccaatcactgacattgctgtgataattaaatcagctggtgaaactgtcccagaggggtac
acctgtgtggaagccacccctacagccctccaagccaatctaaactatggaagtcttaag
agtcctgaactttttctctgctacaagagaggccgagacaaaccacctcttactgacatc
ggggttctatatgaagggaaggaacgtatcatttcaggctgtgaagtggttcaagctact
ccttatggtcgttgtgctaatgttaacaatagttcagcttcttctcaacggatctttatc
acataccgaagggctccttcaatacgacctcagaattcattggcagtgacagatatctgt
gttattgttaccagcaaaggagaaactcctcctcatacattctgcaaagttgataagaat
ttaaattgtggtatgtggggctccagcgtatacctttgttataagaagtctgtgccggct
tctaactctatagcatacaaagctggcttaattttcagatatcctcaagagaactatgaa
tcattcccattgtcagaatctgtacctctcttctgccttcctatgggagctactattgaa
tgctgggaccctcaaaccaaatatccattaccagtcttctcaacatttgtactgacctgt
tcctctgcagaaaaggtttatggtgctgctattcagttttatgagccttatcctcgggag
ctgctaacagaaaagcaacaattgcagttgggactcttgacagctgtagagagaaaagtg
gttacttccaagtccatcaattccaataaatgtatctgccttctttcacactggcctttc
tttgatgcatttcgaaaatttcttatgttcatctacaagctctctgtctctggacctcat
cctcttcccattgaaaagcacatttcccattttatgcacaatatacctttcccttcacca
caaagaccaagaattcttgtgcagctttctgcacatgatgcattaatattgtcccagcca
gtttctactccactgccattaagtggagcaaacttcagcactctactcatgaatcttgga
ccggaaaactgtgctaccctgttactgtttgtattgttagaaggcaagatcctcctccat
tctcttagaccggctgtgttgacaggagttgccgaagctgtagtagctatgatatttcca
tttcagtggcaatgtccatatatccccctctgtcctttgtctctggccaccgtactcagt
gcacctgttccatttattgttggagttgattcacgatattttgatctgtatgatccacca
caggatattgtgtgcattgacttagacacaaacatggtgtacatatcagatgacaagaag
agcacaaactggaagcagtttcctaagaagccatgtaaaagtctgctcagcaccttaaag
aagctgtacccacagctggcagcagttcacaggaaaactcaagaaggttctgcagtggag
atgactcctattgaagcagatttttcctggcagaagaagatgacagaactcgagatggag
atccaggaagctttcctgcgttttatggcatctattttaaagggttacagaacattcctt
aaacctatcacccaggcaccttcaaataaagcaactgctgctgattctttgtttgatcat
caaggatttttgaaaagtagagaccgtgcgtatgcaaagttctatacacaccttaccaaa
acgcaaatattcagcagctttattgaagagtgcagttttgtgagtgacaaggacacaggc
ttggcattttttgacgactgcatagaaaagctctttccagataaaggaacagaaaaagga
gataaggttgatgtagattctgctgaagatgcacggttgattgagcttgatgaatcacaa
aaaagtgaacacacagtatttataatgccaccagaacctcctcctgatgatggacaagac
cgagctccaaaatacagctataaaaacttcccacgactagatttcaagctctttgacaga
ccacaggaactcaagctctccttcaggaaacacccagctggatgcagcatttcaaatagt
ccagcactcatggcaaagaggacgaaacaggagataaaaacagctcataagctagccaag
aaattctacgtaagccctccgcagtgggctaagtgtctcttcagccacagttacagctta
tggtttatttgtctgccagcctacgtcagagttgcacatcctaaggtcaaagctctgcag
caggcatatgatattctaattaaaatgaggaaaactgatgtggaaccgctagatgaggtc
tgctacagagttgtaatgcagctctgtggactgtggggtcagcctgttcaggctgtgaga
gtcctctttgaaatgaaaaatgctggaatacagccaaatgccatcacttacggctattac
aataaggctgttttagaatctccttggcctagcagtaaccgcagcggcatatttctgtgg
acaaaggtacgaaatgtagttcgtggcacagcacaatttaggcaatgcctaaagaaagca
acgcagagcccacgcatatctgtgatatcagctctgcggaataccacgggtggaagtgat
ggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagtggggaacac
actgtcttcgtcagtgacttagtcaggcttgattccattgataatcactctagcacaggc
tgtcagtcagaccagggctatggatctaaggatgaactgttaagggataatggagataat
cttcatgcaagtgaaacacaagtacaagaagacatttcttctaaagctgaagaactaata
ggagatgtttgcattgaggaatctgatgagaagaaacagctaaatgtagaagttcatagt
ccagcagatccgcctgcttggggtaacagtattgtgaaagttccatctggcatttttgat
tgcagtggaaggaaaaacagtggtgaaactggttcaagcctactgtccgtaacccaggat
tcagttgaagatgcagtctttggtgatgctcctcctaagaagacaagtgagaaaggacag
aagaggcagaaactattttcagagagaagctgcagtttcagcagtgaaagcaaagcagga
atgctgttgaaaaaagggagcttggacttgcattctaaagaaatagcaataatgatggga
gaagatgccaagattttaacggcagctttatctggggccaaaacttcaccgtgtaataca
agtaaatcctacagctttgatagtgccgttgaccaacaggtttctgacaaaaatggcact
tggagttgtgttactgatagtgattgggaattggagcatagaacttcaccagtgttggag
gaacctggggaagggcaggagcatcttgagaatggaagaaatgaaaatgtgacaatggta
gaggacatgaaaactgaacaggtagctgagtccaaaagccagaaagtggaatccaaagat
gcaactactaaaaggaatagcttttatggggtggttaagcctattgaaagggaagatgtt
gaagtaggcttggatcctttatctttgctggctactgactgcatccaaccaagactccca
gaggctgaggaaaagctagtgtcaccagttgcagcacggaatttggcggatgaaattgag
aactatatgaatctcaagagcccaatgagtagtaagtttcccagcatggaactgcacaaa
ccagacagggaaacagaagcttctggtacatttagtcacaaccaggaaaggaggtcaagc
ctgcctttggatcacatcccaccaccccctgagtcttatgaaaatcacagaagtccttct
gtctctagatccaaaacatttactggacgaccaaaacaacaaatgcatccacgagttcaa
aaggagcgatcttcatctttgacaggactgagtcgttcttctccgcatggctccttagga
tcagttgtaacaactttgtccaatctgaagttagacaacatattgtctggcccaaaaatg
gatgtcctaaaatcaggcatgaaacaggctgccagtgtggccagcaagatgtggggagtt
gtaacttcagcatatagctactcagatgatgaggcaaaaaacagtccaggagacttcaat
tttcctgctggttttgaagatagtattttaggggataatttgtcatcaagaactggagtc
ccgggactaattgcaaatgagcttgcacaaagcactactagtcttggcagtagcagtagc
agtggagaagcaggaagacaacattacaatgcaggtgaagtttcattcccaagaagtatg
aaagttccagagtctgagaagtcagagctcagctcttctcataacacaagtttatccagc
attttccagaactacgcaatggaggttttgatgtcaagctgctctcagtgtagagcttgt
gatgctttggtttatgatgaagaaattatggctggatggacagcagatgattcaaacttg
aacactacctgtcctttctgtagaagtatttttctacctttacttaatattgagtttaaa
gacctacgtggttctgcaagctttttcctgaagcaaagtacctcaggagatagtttacaa
agtagcaatactccattaaccacggatgtactggagcagaaggtgctgtccagttcagct
gttactgacttgatcagtttttcagaccacccacattccagccacacgatagctgaagaa
tcaagctcctcaactgagcagagtgaagctgcagaagaacagagcaaagatctcagaacc
atgaagatgtctgccaataatccaccaaaaaggggagtgtctttaactcgaagccacagt
gttggaggtccactgcaaaacattgatctttcccagagaccgtcccatggcatttcaaca
gttagtcttccaaatagtttgcaagaagttgtggatcctttaattgaaagacctaatcct
ctccccgtatccgtaccctacttgagccctttggtactgcggaaggagcttgaatcccta
ttggaaaacgagggagagcaagtaattcatacgtccaaattcatcaatcaacaccccata
atcttctggaacttggtttggtatttccgaaggttggatctacctagcaatttgcctgga
cttattctaacatctgaacattgtaatgatggagtgcagcttcctttgacatctcttgct
caagatagcaagctagtatacatccaacttctgtgggacaatatcaacctccaccaagag
ccaggggagcctctgtatatatcctggagaaatctcaattcttctgaaaagaaaccctct
acagtggcagaagatcagcaggcaacacacactttgttggagaacattaaactgagtatt
cagcataataatgttgttaaaccaatccatctccttctacagaaagttaaaccagatgtg
aaacgacagaggagtttttacagagaaattcttttcctgtctctggtatctcttggaaga
gagaacattgacattgaagtctttgatagcgaatacagacttgcacataaaaatctgcca
aaagatgttctcgaaaggatgcagaaaatagatgcaccaccaagcagcagagttgagtgc
tgtcggaagtactttggagcacctttaatataa
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