Lagopus muta (rock ptarmigan): 125686989
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Entry
125686989 CDS
T09141
Name
(RefSeq) interferon alpha-2-like isoform X1
KO
K05414
interferon alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04060
Cytokine-cytokine receptor interaction
lmut04217
Necroptosis
lmut04620
Toll-like receptor signaling pathway
lmut04621
NOD-like receptor signaling pathway
lmut04622
RIG-I-like receptor signaling pathway
lmut04623
Cytosolic DNA-sensing pathway
lmut05164
Influenza A
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125686989
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125686989
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125686989
04621 NOD-like receptor signaling pathway
125686989
04622 RIG-I-like receptor signaling pathway
125686989
04623 Cytosolic DNA-sensing pathway
125686989
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125686989
05168 Herpes simplex virus 1 infection
125686989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125686989
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Interferons
125686989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Mab-21_C
Pept_S41_N
Motif
Other DBs
NCBI-GeneID:
125686989
NCBI-ProteinID:
XP_048787651
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All DBs
Position
Z:complement(34690551..34697750)
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AA seq
222 aa
AA seq
DB search
MTFKAIQPITWDLYRKGEAQLLIFIMYTFGLTQIGLILLCTITISSLTCNHLPLQQRKVI
ESSLQLLDKMGKRFPQQCLREKMSFRFPEQVLKHRQKETIKVAIEEILQHIFYIFSKNLT
LAAWDGAALEQFQNGLYQQIEQLEACIIKKQTQYFWSKEVNKLKLKKYFQKIDSFLKEKH
HNLCSWEISRAEMRRCLQLIDKVIRKLYKVDMLSSLPVTDAS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaaagcaatccagcctatcacttgggatttgtacaggaaaggagaagcacag
ctgcttatctttatcatgtacacttttggcttgacacaaattggcctcattctgttatgc
actatcaccatctcaagtcttacctgtaatcaccttcctttacagcaaagaaaagtgatt
gaaagcagcctgcaacttttggacaaaatgggcaaacggtttcctcaacagtgtctaaga
gagaaaatgtccttcagatttcctgagcaggttctaaaacacagacagaaagaaactatt
aaagtagccattgaagaaatcttgcaacacatcttctatatctttagcaaaaatctgact
ctagctgcctgggatggggcagctctagaacaattccaaaatggactctatcagcaaatt
gagcaattggaggcatgcataatcaagaaacagactcaatatttttggagtaaagaagtc
aacaagctgaaactgaaaaagtatttccaaaagatagactcttttcttaaagagaaacac
cacaacctgtgctcctgggagatcagccgtgcagaaatgaggagatgtcttcaattgatt
gataaagtcataaggaagctttacaaggtagacatgctctcctctctgccagttacggat
gcaagctaa
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