Lagopus muta (rock ptarmigan): 125686997
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Entry
125686997 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125686997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125686997
04131 Membrane trafficking [BR:
lmut04131
]
125686997
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125686997
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125686997
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125686997
mRNA cycle factors
P-body specific factors
125686997
Membrane trafficking [BR:
lmut04131
]
Others
Actin-binding proteins
Myosins
125686997
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125686997
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125686997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
HalX
Motif
Other DBs
NCBI-GeneID:
125686997
NCBI-ProteinID:
XP_048787665
LinkDB
All DBs
Position
Z:complement(670935..760971)
Genome browser
AA seq
1284 aa
AA seq
DB search
MDPHIYGVAEEAYRRMAREGRDQSLVVSGESGAGKTVSAKFAMRFFATVGGGGCGEVESR
VLAAGPVLEALGNAKTTRNDNSSRFGKYVELSFDRRQRLQGARITTFLLEKSRVVLQAEK
ERNYHIFYQLCACAHRPQFQSLALEGSEGFFYTSQGGEAAIDGVDDAKEMEKTQNALGML
GVPEAQQAAIFRLLAAILHLGNVEVKAERDGDASSVSDDDPHLSHFCTLLTLDPPPVAHW
LCHRRLRAAAESCVTNMAAAQGLAARDALAKFLYARLFLWVLEILNGALRDAQERQRFIG
VLDVYGFETFATNSFEQFCINYANEKLQQQFNVHVFKLEQEEYMKEGIPWSLIEFCDNQP
CIELIEGKLGILDLLDEECKVPKGSDLGWAQKLYGRHASCPYFRKPRAADGTFVIRHFAE
EVEYSSLGFVEKNRDTVYEELLDVVRASGDPTVASLFRDDDSTNQTQPYKIPVRSARPPI
RTPDRENRKTVGQQFRGSLRLLMETLNATTPHYVRCIKPNEQRQPFRFDPHRAVQQLRAC
GVLETVRISAAGFPSRCSYQDFLTRYRVLIKKPDPVKKDPKLICQDLLQDLIKDPEHFRL
GRTKLFFRSSQVAYLEKLRAERLLAAAILIQATYRGWLQRRHFRRKRLAAAILQRHIRGF
LARSPSHPSTSRLFLPPPPFWQARGRAQRRHHPTSLPGFCGPFPVPAPPRGRHHVAMLLP
AAGGAAAAGGAAIPAGIDGRRRAAGSRHGAEGGAAAAQDPPAGQIPQSPAGRGGRAAKGT
LGSGTAPANPTRGNGAPAKGASKDGERKVVKDGALGSAPRWPHSDQHMDREDLIEAYYGM
AETNRLLESQLQEQRLQHEAELEAIREELRVARGDVDEALHGTTPQTEGRRPYRGMLDYD
PADEPLLIRYLITELDPTKMAAALPCLPAYILFMCIRRADDVNDARRLQSLLGAAINAIK
AVLQDSHGVELPSFWLANCLRLLHCLKQYSGDPGFMCESSARQQEQSLRHFDLSEYREVL
GALSANIYGQLCSTAGSDLQPMVVSAVLESQTLWGPTACRPCWNPKRYGVPQLWGPRSSH
RAEADPSYTLQDLIGRLEALYRVVSEHGLDPEVILQLFRQLFYRLSAVALNHLLLRKELC
SWATGLQLRFNISQLEEWLHRRKLQHSGALQALQPLIQAAQLLQLNKKSQQDAQAICSHC
TALSCQQLVKLLSLYTPLDDFEERVSVAFIRTIQATLKDRGDPAELLLDTRRCFPLQIPY
NPSSVPLDAVPIPPVLRLHFLVRV
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacccccacatctatggggtggccgaagaggcctataggaggatggccagggaaggc
cgcgatcagtcgctggtggtgagcggcgaatccggggcgggcaaaaccgtgtcggccaaa
ttcgccatgaggttcttcgccaccgtcggagggggcggctgtggggaggtggagagcagg
gtgctggcggccgggcctgtgctcgaggctctgggcaacgccaagacgacgcgcaacgac
aacagcagccgctttgggaaatacgtggagctgagcttcgaccggcggcagcggctgcag
ggcgcccgcatcaccaccttcctgctggagaagagcagggtggtgctgcaggccgagaag
gagcgcaactaccacatcttctaccagctctgcgcctgcgcccaccgcccccaattccaa
agcctggccttggaaggttccgagggcttcttctacacctcccaaggaggggaggccgcc
atcgacggcgtggacgacgccaaggagatggaaaagacccagaatgccttgggcatgttg
ggagttccggaagctcagcaggccgccattttccgcctcctggccgccatcttgcatctg
ggcaacgtggaagtgaaggccgaacgggacggcgacgccagcagcgtttcggacgacgac
ccccacctgtcccacttctgcaccctgctgaccctcgaccccccccccgtcgcccattgg
ctctgccaccgtcgcctgcgggccgccgccgagagctgcgtcaccaacatggccgccgcg
cagggcctggcggctcgagacgctctggccaagttcctctacgctcgcctcttcctctgg
gtgttggagatcctcaacggggccctgagggacgcccaggagcggcagcgcttcatcggg
gtgctggatgtctatggcttcgagaccttcgccaccaacagctttgagcagttctgcatt
aattacgctaacgagaaactccagcagcagttcaacgtgcatgtattcaaattggagcaa
gaggagtacatgaaggaaggcatcccctggagcttgattgagttctgcgataatcagccg
tgcattgagttaattgagggcaaattgggcatcctggatctgctggatgaggagtgcaag
gtcccgaagggcagcgatttggggtgggcccaaaagttatatggccgccatgcctcttgc
ccctatttccgaaaaccccgagcggccgacggcacttttgtcatccggcacttcgccgag
gaggttgaatacagcagcctgggcttcgtggagaagaaccgcgacaccgtgtatgaggag
ctgctggacgtcgtcagggccagcggggacccgaccgtcgcctccctcttccgggatgac
gattcgaccaatcagacgcagccttacaaaatccccgtccgctctgcccgcccgccaatc
agaacgcccgacagggagaaccgcaagacggtgggccagcagttccggggttccctgcgg
ctgctgatggaaaccctcaacgccaccacgccgcattacgtgcgctgcatcaaacccaac
gagcagcgacagcccttccggttcgacccccatcgggccgtgcaacaactgagggcttgt
ggggttttggagacggtccgcatcagcgccgcaggctttccttccagatgctcctatcag
gacttcctgacccgttaccgagtcttaattaagaagcccgaccccgttaagaaggacccc
aaattaatctgccaggacctgttgcaggacctcattaaggacccggagcacttccggtta
ggccgcaccaaactcttcttccggtcctcccaagtcgcctatttagagaagctgcgggca
gagcggctcctggcggccgccattttgattcaggccacctacagggggtggcttcagcgg
cgtcacttccggcggaagcggctggcggccgccatcttgcagcgtcacatccggggcttt
ttggcgcgcagtccctctcacccctccacttcccgccttttcctccccccgccgccattt
tggcaggcccggggccgagcgcagcgccgtcaccatccaacgtcacttccggggttttgc
ggcccgtttccggtaccggcgcctccgcgcggccgccatcacgttgcaatgcttttaccg
gcggcgggtggcgctgcggcggctggaggagctgcgatcccagcggggatcgacgggcgg
cgccgagcggctgggagccggcatggagcagaaggtggtgcagctgcagcgcaggatcca
ccagcaggacagatcccacaaagccctgcaggacgaggtggccgggctgcaaaaggaact
ttggggtcggggacggcgcctgcaaaccctacaagaggaaatggggcgcctgcgaaaggg
gcgagcaaggatggagagcggaaggtcgttaaggatggcgctttgggctcggcgccccgt
tggccccatagcgaccaacacatggacagggaggatctgatcgaggcctattatgggatg
gcggagaccaacaggctgttggagtcgcagctgcaggagcagcggctgcagcacgaagcc
gagctggaggccatcagggaggagctgcgcgtcgccaggggggacgtggatgaggctctt
catgggacgaccccacaaacggaaggccgccggccctacagagggatgctggactacgac
cctgccgacgaaccgctgctcatccgctacctcatcacagagcttgaccctaccaagatg
gccgccgcgctgccctgcctcccggcctacatcctgttcatgtgcatccggcgcgctgat
gacgtcaacgacgcgcgccgcctgcagtccctgctgggagccgccattaacgccatcaag
gccgtgctgcaggacagccacggcgtggagctgccgtccttctggctggccaactgcctg
cgcctgctgcactgcctcaagcaatacagcggggacccgggcttcatgtgtgagagcagc
gcgcggcagcaggagcagagcctgcggcactttgacctgtcggagtacagggaggtgctg
ggcgcgctgagcgccaacatctacggacagctgtgcagcacggcgggcagcgacctgcag
cccatggtcgtgtcggccgtgctggaatcccaaaccttatggggtcccacagcttgtcgg
ccgtgctggaatcccaaacgttatggggtcccacagctgtggggtccccgcagctcccat
agggccgaagcggatccttcctacaccctgcaagaccttatagggcgtctggaggcgctc
tatagggtggtgagtgagcacggcctggaccccgaggtgatcctacagctcttccgccag
ctcttctatcgcctcagcgccgtcgccctcaatcatctgctgctgcgcaaggagctctgc
tcgtgggcaaccggactgcagctcaggttcaacatcagccagctggaggagtggctgcac
aggcggaagctgcagcacagcggggccctgcaggccctgcagcctttgatccaggccgcc
cagctgctgcagctcaacaagaagagccagcaggacgcccaggccatctgcagccactgc
actgcgctcagctgccagcagctggtgaagctgctcagcctctacaccccgctggacgac
tttgaggagcgcgtcagcgtcgccttcatccgcaccatccaggcgaccctaaaggatcgc
ggtgaccccgcagagctgctgctggacacgcggcgctgcttcccgctgcagatcccctac
aacccgtcctccgtcccgctggacgccgtccccatcccgcctgtgctgcgcctccacttc
ctggtccgcgtctga
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