Lagopus muta (rock ptarmigan): 125687000
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Entry
125687000 CDS
T09141
Symbol
SYK
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04625
C-type lectin receptor signaling pathway
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125687000 (SYK)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125687000 (SYK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125687000 (SYK)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
125687000 (SYK)
Protein kinases [BR:
lmut01001
]
Non-receptor tyrosine kinases
SYK family
125687000 (SYK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7063
DUF7145
Kdo
ABC1
Motif
Other DBs
NCBI-GeneID:
125687000
NCBI-ProteinID:
XP_048787668
LinkDB
All DBs
Position
Z:complement(52265496..52310039)
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AA seq
636 aa
AA seq
DB search
MASNMASPANHLPYFFGNITREEAEEYLMQGGMSDGLYLLRQSRNYLGGFALSLAYGRKV
HHYTIERELSGTYAIAGGKSHASPAELINYHSEEADGLICLLRRSFNRPPGVEPKTGPFE
DLKENLIREYVKQTWNLQGHALEQAIISQKPQLEKLIATTAHEKMPWFHGRITREESEQR
ILIGSRNNGKFLIRERDSNGSYALCLLNDGKVLHYRIDRDKTGKLSIPDGKRFDTLWQLV
EHYSYKPDGLLRVLSIPCPRHGSESDNSSFDTRPLPGTPSKSWARGGIISRIKSYTFPKA
GSKKLQTPIGPSSDDQTPFNPYVLQRARGLIEAEKGDQREALPMDTEVYESPYADPDEIK
PKNVTLDRKLLTLEEGELGSGNFGTVKKGFYKMKKGAKPVAVKILKNESNDPAIKDELLR
EANVMQQLDNPYIVRMIGICEAEAWMLVMEMAELGPLNKFLQKNRHITEKNITELVHQVS
MGMKYLEENNFVHRDLAARNVLLVTQHYAKISDFGLSKALSADENYYKAQSHGKWPVKWY
APECMNFYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGGEVAQMIERGERMERPEACPV
EVYDLMKLCWTYNVDDRPGFVSVELRLRNYYYDIAH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacatggctagccctgctaaccatctgccatacttctttggcaatattaca
cgcgaggaagctgaggagtatctgatgcaaggaggaatgagtgatggactatacctgctt
cgccaaagccggaattacctagggggctttgccttatccttggcctatggaaggaaggtt
catcattacacaattgagagggagttgagtgggacatatgctattgcaggaggcaaatca
catgcaagtcctgctgaactcattaactatcattcagaggaagcagatggccttatctgt
ctactgagaagatctttcaatcgaccaccaggcgttgagcccaaaacagggccttttgaa
gatttgaaagagaacctcatcagagagtatgtcaaacaaacatggaatctgcagggtcat
gctcttgaacaagctatcattagccaaaaacctcaactggagaaactgattgccactaca
gcccatgagaagatgccttggttccatgggaggatcactcgggaggagtcagagcagcgt
atcctcattggatcaagaaacaatggaaaatttttaatccgagaaagggacagcaatggt
tcctatgctctgtgtctgctgaatgatggaaaagtactgcattatcgtattgacagagat
aagacaggaaagctctccataccagatggaaaaagatttgacaccctctggcagttagtt
gagcattattcatacaaaccggacggattattaagggttctgtccattccctgtccacgg
catggctcagaaagtgataactcttcttttgacactcgtcctcttcctggaaccccttct
aagagttgggcaagaggtggaattatctcaagaatcaaatcgtacacctttccaaaggct
ggcagcaaaaagctccagacacctattggtccctcatctgatgaccaaacaccttttaat
ccttatgtactgcaaagggcaagaggtctaatagaagcagagaaaggtgatcagagagag
gccttacccatggacactgaggtttatgaaagtccgtatgctgacccagatgaaattaaa
ccaaaaaatgtcactcttgataggaaattgttaaccctagaggaaggagagcttggctct
ggcaactttggtactgtaaagaaagggttctataagatgaagaagggggccaagccagtg
gctgtaaaaattcttaagaacgagagtaatgatccggccataaaggatgagttactgaga
gaagcaaatgtaatgcagcaactggacaacccatatatagtccgaatgataggtatatgt
gaagcagaggcctggatgttagtaatggaaatggctgaacttgggccactgaacaagttt
ttgcaaaaaaataggcacatcacagaaaagaatataacagaacttgtacatcaggtttcc
atggggatgaaatatctggaggagaataactttgtacatagggatctggctgcaaggaat
gtgctattagtcacccagcattatgccaaaatcagtgactttggactatctaaggctctt
agtgctgatgaaaattattacaaggcacaaagtcacggaaaatggccagtcaagtggtat
gctccagaatgcatgaatttctacaagttttctagcaaaagtgatgtctggagctttgga
gttttaatgtgggaagcattctcttatgggcaaaagccctataaaggaatgaaaggcggc
gaagttgcacagatgattgaaagaggagaacgaatggaacgtcctgaagcctgtccagtg
gaagtctatgacttaatgaaattatgttggacgtacaatgttgatgaccgaccaggattc
gtttccgtggagttgcgattacggaactactattacgacattgcccactag
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