KEGG   Lagopus muta (rock ptarmigan): 125687065
Entry
125687065         CDS       T09141                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125687065 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125687065 (POLR1E)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     125687065 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 125687065
NCBI-ProteinID: XP_048787780
LinkDB
Position
Z:complement(74807364..74820990)
AA seq 413 aa
MAAATWCYRGDPEEEQPALLVTFSNGRLQRPDAVRFSLYRSSDVANPRKKRRRILVSETE
RLSYVGNNFSSGAMKCNSLCRYFLGVLNKDSGQMEVFNAEIFNMQPLLSDNAIPDDTRDY
QNKSYREKVDLCIEAFGTSKQKRALNSRRMNAVGNDILNTAVTKAAADVIDAKGVTALIQ
DVAQDDDQNMSIFLPPCHEDADKPENVYKFEDILSPAEYEALQNPAAAFVNITPEEITKK
TEEKSHCSFVLEELKFLPADEKSRDRKARCLWFLDILIKFSFLKIIKKKHPMGPECPHII
SRKLMKNFTSLTYNNGSVQNLISASLKTKIAAYVIALALHIKNFQIDLTVLQNDLKLHES
RMMDIARAMRLKVSKAKGMPGLENDQNHKLGTLSLPLPVQKASGSQRKRRKIN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggccgccgcgacgtggtgctatcgtggggaccccgaggaggagcagccggcactgctg
gtgacgttctctaatgggcggctgcagcggcccgacgccgtgcgtttctccctctaccgg
agcagcgatgtggccaatccccggaagaagaggcggaggatcctggtttcagaaactgaa
aggctttcatatgtggggaataacttcagcagtggagctatgaaatgtaactctttatgc
aggtattttcttggtgttttaaacaaggattctgggcaaatggaagtcttcaatgctgaa
atattcaatatgcaacccttactgtcagataatgcaattcctgatgacacaagggattat
cagaataaatcctacagggaaaaggtggatttgtgcattgaagcctttggtaccagcaag
cagaagcgagctctgaactctcggcgaatgaatgcagtgggcaatgatattctgaataca
gctgtgacaaaagcagcagcagatgtgatagatgcaaagggggtaacagctttgatccag
gatgtggcccaagatgatgaccagaacatgtccattttcctaccaccatgtcatgaagat
gctgacaaaccagaaaacgtttacaagtttgaggacattttgtccccagcagaatatgaa
gcattgcagaatccagcagcagcttttgttaacatcactccagaagaaatcaccaagaaa
acagaagagaaaagccattgctcctttgtcttagaggagctgaagttcctgcctgctgat
gagaagagcagggatcgcaaagctcgatgcctgtggtttctggacatccttattaagttc
agctttctgaaaatcatcaagaagaagcatccgatgggtcctgaatgccctcacatcatt
agcaggaaactcatgaagaacttcacttcactcacctacaacaatggcagtgttcagaat
ttaatctctgcatcactgaagactaaaattgcagcatatgtcattgcattggctctgcac
attaaaaacttccaaatagacctcactgtcctgcagaatgacttgaagctccatgaaagc
aggatgatggacattgcaagggccatgcggttgaaggtctccaaggcaaaggggatgcca
ggacttgagaatgatcaaaatcacaagcttggcaccctctctctccctttgcctgtgcag
aaagcctcgggaagccagaggaaacgcagaaagattaactaa

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