Lagopus muta (rock ptarmigan): 125687116
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Entry
125687116 CDS
T09141
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125687116 (TMC1)
03037 Cilium and associated proteins [BR:
lmut03037
]
125687116 (TMC1)
Transporters [BR:
lmut02000
]
Other transporters
Pores ion channels [TC:
1
]
125687116 (TMC1)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125687116 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
125687116
NCBI-ProteinID:
XP_048787898
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Position
Z:36054907..36165351
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AA seq
952 aa
AA seq
DB search
MPKNEKPATNEGNDANEVDNEEDSAAENQENDRGAGKERKRAKPRTRRGHGRGRARHGGE
EDGDDEDGTRRAGQRRQRNRRGRSRAGGNEGSDSEGDPTKARKNQANQKSKEDGEEEEDE
KGGKSGKGKNDKKQDKKADKKGKKEKANKKKKDKKKSGSGSDSDSEEEPITEEELAKLKE
EVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWM
KFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPE
ALMGKPYGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMP
LSYFLVGVGTIGYSFMIVIRTMARNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNK
FASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLAMCTLAGSGYLIFFVVRRSQKFA
LEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNL
YTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWE
TMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNV
LGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYM
AMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYAS
NPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEE
NPFETEPPQSKQKEGKQDESAANQDNKKEQSGNEAKKTGQQQEGSSSQAPQHPGTAPNGH
NPPQGRGNFLPPPIAVTRPPGPRGYAAPGYLPGHPRFPGVQPGMPRGPPHYR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaatgaaaagccagccaccaatgaaggaaatgatgccaatgaggtcgacaat
gaagaagacagtgcagccgagaatcaagaaaatgacagaggagcaggtaaagagaggaag
agagcaaaaccaagaaccagaagaggacatggaagaggaagagccaggcatggtggtgag
gaggatggagatgatgaagatggaacaaggagagctgggcaacgcaggcaaagaaaccgg
agaggacggagccgagcaggtggaaatgagggcagtgattctgagggggatcctacaaaa
gccaggaagaaccaggcaaatcaaaaatcaaaggaagatggtgaagaagaggaagatgaa
aaagggggtaagagtgggaaaggcaaaaatgacaagaaacaggacaaaaaggctgataag
aaagggaagaaagaaaaggccaacaagaagaaaaaggacaaaaagaagtcaggatctggc
tctgattctgactctgaggaggagccgattactgaggaggaattggccaaactgaaagaa
gaggtagaagaaaaaaagaagctaatcgccacattacgaaacaagccatggaagatgaaa
aagaagttgtcagttctaaaagaagcgcagctttttgttgaaaaatttgaaggtgctctt
ggaaaaggaaagggaaaaaagttctatgcgtacaaagtgatgatgaccaagaaatggatg
aaattccaaagagattttgagaattttaagacagcctgcataccctgggaaatgaaaatt
aaagagattgaaagtcactttgggtcatcggtagcatcttatttcatattcttacgctgg
atgtatggaataaatatgattctctttgggctgacgtttggacttgtaatggtgcctgag
gcattgatgggaaagccatatggctctttacctagaaaaactgttccaagagctgaagaa
gctacagctatgaactttgctaccctttgggattttagtggctttgcacagtattctgtg
cttttttacggttattacaataatcagaggacaattggatggctcaagttcaggatgcct
ctttcctatttccttgttggcgttgggactattggctacagctttatgattgtcattaga
acaatggcaaggaatgcaaatgatgatggtggtggggatgatactagctttaatttcagc
tggaaaatgttcacaagctgggactacctgattggcaatcctgagacagcagataataag
tttgcttccatcactaccagctttaaggaagctatcgtggaggagcaggagagccgaaag
gaggaaaatattcacttgactcggttcctgagggtgcttgctaacttcttagccatgtgc
acacttgctgggagtggctacctcatattttttgttgtgagaagatcccagaaatttgcc
ctggaaggtctggagaactacgggtggtgggaaagaaatgaagtaaacatggtcatgtca
cttttgggaatgttctgtccaaccttatttgatgtaatcagttctctggaaaactaccac
cctcgaatagctctaagatggcagcttggacgcatatttgctctttttctgggcaatctc
tacactttcattattgccctaatggatgaaatcaatctcaagttggaagaagaaaagata
gtcaagtataacatgacaatatgggaagccagtctgtacaatggcactattccagaaaat
tcaactgctcctccaatacaggtggaccctgcagacgttcctagaggaccatgttgggaa
acaatggtaggccaggagtttgtacggctgacagtctctgacacgatgacaacatacatc
acaattctaattggtgatttcttgagagctgtctttgttaggtttttcaattactgctgg
tgctgggacttggaatatggatttccatcatattcagaatttgatataagtgggaatgtg
ctcggactgatatttaatcaaggcatgatctggatgggatctttttatgctccatgtctc
ccagcaatcaatgtgttccgactccatacttcaatgtacctgcaatgctgggcagtgatg
tgctgcaatgttccccaggagagagtcttcaaagcctccagatcaaacaacttctacatg
gccatgttgcttttcattctcttcctttctacactgcctgctgtgtacaccattgtctcc
attccaccatcttttgactgtggccctttcagtgggaaaacaagaatgtttgaagtcata
tcagaaactctggagcatgacttcccttcttggtttgggaaggtatttggttatgcctct
aaccctggactcatcctaccttttatattactgatggtcctgagtatttattatcttaac
gctacatccaagtcctacaaggaagctaacctggaacttaaaaagaaactacaaagtcaa
gcagaagaaaataaaagaagaaataaacaaaaggcgcaaaaatcaaatgaacaagaggaa
aatccatttgagacagagccaccacagtcaaaacaaaaagaaggcaagcaagatgaatct
gctgcaaatcaagataacaagaaagaacagagtggcaatgaagcaaaaaaaacaggtcag
caacaggaaggaagttcctctcaggcaccacagcatccaggcactgccccgaatggccac
aatccaccacagggcagaggaaactttctccccccacccattgctgtgactcggccacca
gggccacgagggtatgcagcaccaggctatctacctgggcacccacgctttccaggggta
cagccaggaatgcccaggggacctccccactacagataa
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