Lagopus muta (rock ptarmigan): 125687118
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Entry
125687118 CDS
T09141
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125687118 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lmut03310
]
125687118 (RORB)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125687118 (RORB)
Nuclear receptors [BR:
lmut03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125687118 (RORB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
OmpH
Motif
Other DBs
NCBI-GeneID:
125687118
NCBI-ProteinID:
XP_048787905
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Position
Z:36787179..36925232
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AA seq
459 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSNSISNGLGNLNNETGSTYSNGHVIDLPKSEGYYNVDSAQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGISMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKVYQSKTREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLTKLIAKIPTITALC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDSTTGCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatctgtggtgataagtcctctggaata
cattatggagtcatcacatgtgaaggctgcaagggattctttcggaggagtcagcagaac
aatgcctcctactcctgcccaaggcagagaaactgtttaattgacagaaccaacagaaat
cgttgccaacactgccgactgcagaaatgtcttgccctgggaatgtctagagatgctgtg
aaatttggaagaatgtccaaaaagcagagggatagcttgtatgctgaagtgcagaagcac
cagcagcgattgcaggaacagcggcagcagcagagcggtgaggcagaagcccttgccagg
gtttacagcaacagcatcagcaacggcttgggcaatctgaacaacgaaacgggcagcacc
tattcaaatgggcacgtcatcgacctgccaaagtctgagggttattacaacgtggattct
gcccagccttctccagatcagtctggcttagacatgactggaatcaaacagataaagcag
gaacctatctatgacctcacctctgtaccaaacttgtttacctatagctctttcaacaat
gggcagttagctccggggatatccatgactgaaatagatcgaattgcacagaatatcatt
aaatctcacttggagacatgccaatatacaatggaggagctacaccagctagcttggcaa
acccacacgtatgaagaaattaaggtttaccagagcaagaccagagaagccctttggcag
cagtgtgccattcagatcactcatgctatccagtatgtggtggagttcgcaaagcggata
acaggctttatggagctctgccagaatgaccaaattctcctccttaagtcaggctgcttg
gaagtggttttggtgagaatgtgccgtgccttcaacccactcaacaatactgttctgttt
gaaggaaagtatggagggatgcagatgttcaaagccttgggttctgatgatctggtgaat
gaagcatttgactttgctaagaatttatgttccttacagctgactgaggaggagattgcc
ttgttttcatctgctgttctgatatcaccagatcgagcctggttaatagagccaaggaag
gtccagaagcttcaggaaaagatttactttgcacttcaacatgtgatccagaagaaccac
ctcgatgatgagactttgacaaagttaatagccaagataccaaccattactgcactttgc
aacttgcacggagagaaactacaggtatttaaacagtctcacccagatatagtgaacaca
ctgtttcctccattatacaaggagcttttcaatccagactcaaccactggctgcaagtga
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