Lagopus muta (rock ptarmigan): 125687202
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Entry
125687202 CDS
T09141
Symbol
SMN1
Name
(RefSeq) survival motor neuron protein
KO
K13129
survival motor neuron protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125687202 (SMN1)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125687202 (SMN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
DUF7483
Tudor_3
Motif
Other DBs
NCBI-GeneID:
125687202
NCBI-ProteinID:
XP_048788053
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All DBs
Position
Z:complement(73557282..73562022)
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AA seq
264 aa
AA seq
DB search
MAGRVLFRRGAGQSDDSDMWDDTALIKAYDKAVASFKNALKNGDCAEPSDKQEQRPGMKR
KNSKKNRNRNKSNGVPLKQWKVGDCCNAVWSEDGNVYPATIVSINLKRGTCVVTYTGYGN
KEEQNLADLLPPASDETNENESPYSTDESEKSSQSHQNENNCTKERFSPKNLRFPKPPTP
PGLGRHESKFRTLPPFLSCWLPPFPAGPPLIPPPPPMGPDSPEDDEALGSMLIAWYMSGY
HTGYYLGLKQSRMEAALEREAYLK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagagtgctgttccggcgcggcgccgggcagagcgacgactcggatatgtgg
gacgacacggccctcatcaaggcgtacgacaaggcggtggcctccttcaagaatgcttta
aagaacggggactgcgcagagccttcggataagcaggagcagcggcccgggatgaaaagg
aaaaacagcaagaagaacaggaacagaaacaagagcaacggcgtgccgttgaaacagtgg
aaagttggtgactgctgtaacgctgtctggtctgaggatggtaatgtctacccagcaact
attgtctccataaatctgaagaggggtacatgtgtcgttacttacaccggatatggaaat
aaggaggaacagaacctggctgatctacttcctccagctagcgatgaaacaaatgaaaac
gagagtccatattcaacagatgaaagtgaaaaatcttcccagtcacatcaaaatgaaaat
aactgcacaaaagaaagattctctcctaaaaacttacggtttcccaaaccaccaacacct
ccaggcttgggaaggcacgaatcaaaattcagaacacttccaccgttcttgtcttgctgg
ctcccaccctttccagcaggaccaccgttgattcctcctccaccacctatggggccagat
tctcctgaggatgatgaagcgttggggagcatgttgatagcttggtatatgagtggttat
cacactggatattacctggggttaaaacaaagtcgaatggaagcggccctagagagagag
gcctatctaaaataa
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