Lagopus muta (rock ptarmigan): 125687277
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Entry
125687277 CDS
T09141
Symbol
SOX10
Name
(RefSeq) transcription factor SOX-10 isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125687277 (SOX10)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125687277 (SOX10)
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Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125687277
NCBI-ProteinID:
XP_048788228
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Position
1:50249523..50259162
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AA seq
565 aa
AA seq
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MLSWSGGLQHPLLTSPDCVLALSNAWLHLPPFPPPVLSSKASKRHPAGALVKTKPPSRNG
TCLSTSPAARPTAGGRTGGHWDKSCSLHRVCCPHQPATEKKEATMADDQDLSEVEMSPVG
SEDHHCLSPGPSMASDNSPHLTGSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSG
YDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLW
RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQGEGEGQVEGEAGGAAAI
QAHYKNTHLEHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKTELQAGKADSKREGRSL
GEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHAGHPGHVGGYAAAAGYG
LGSALAAASGHSAWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAYT
SLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISD
PTPSVPQSHSPTHWEQPVYTTLSRP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttggagtggggggctgcagcatcccctcctcaccagtcctgactgtgtcctg
gctctgagcaatgcttggctccaccttccacccttccctcccccggtgctaagcagcaaa
gccagcaagaggcatccagccggggcattagtaaaaaccaagcctccctccaggaatggc
acttgcctgagcacctccccggcagcacgccccacagccggagggagaacaggggggcac
tgggacaagagctgcagccttcacagggtttgctgcccgcaccagccagcaactgagaag
aaggaagcgaccatggctgatgaccaagacctgtcggaggtggagatgagcccagtgggt
tctgaagaccatcactgcctctcgccgggaccatccatggcgtcggacaactctccacac
ctcactggctctggaaatggggagatgggcaaggtcaagaaggagcagcaagactcggag
gcggatgacgacaagttccctgtctgcatccgtgaggcggtcagccaggtgctgagcggc
tatgactggaccctggtacccatgcctgttcgggtcaatggaagtaacaagagcaaaccc
cacgtcaagaggcccatgaacgccttcatggtctgggcgcaggctgcccggaggaaattg
gctgaccagtatccgcacctccacaatgctgagctcagtaagaccttggggaagctctgg
aggctgctgaacgaaagcgataagcgtccttttattgaagaggccgagcggctaaggatg
cagcacaagaaggaccaccctgactacaaataccagccacggaggcggaaaaatggcaag
gccacgcagggcgagggcgagggccaggtggagggggaggctggcggggctgctgctatc
caggctcactacaagaacacccatctggagcacaggcatcctggggaagggtcaccaatg
tccgatgggcacccagagcactcttcaggtcagagccacggccctcccactcctcccacc
acccctaagaccgagctgcaggcaggcaaagctgactccaagcgagaagggcgttcccta
ggggaagggggaaagccacacattgacttcggcaacgtggacatcggggagatcagccat
gaagtgatgtccaacatggagacctttgatgtcaacgaattcgaccaatacctgccaccc
aacggacacgccggccacccaggccatgttgggggctacgcagcagccgctggctatggt
cttgggagcgccctggctgcggccagtggacactcagcctggatctccaagcagcatgga
gtctccttgtccgccaccacatcaccagtggtggactccaaggcccaggtgaaaacggag
gggtctgcccctggaggtcattacaccgatcaaccctccacctcccagatagcttacaca
tccctgagtctgccccactacggttcggcctttccctccatctccaggccccagtttgac
tatcctgatcaccagccctcgggaccctactacagccactccagccaagcctccggcctc
tactctgccttctcctatatgggaccttcccagcgtcctctttacactgccatctctgac
cccacaccctccgtgccacagtctcatagtcccacacattgggaacagcctgtgtatacg
actctctccagaccatag
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