Lagopus muta (rock ptarmigan): 125687320
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Entry
125687320 CDS
T09141
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125687320 (DDX4)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125687320 (DDX4)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125687320 (DDX4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
125687320
NCBI-ProteinID:
XP_048788346
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Position
Z:17865715..17892818
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AA seq
665 aa
AA seq
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MEEDWDTELLEQEAAAAPQRRSEEQVWMANSGRPNSPSLRFSSRPSSPLSGFPGRPNSPF
FGFSQNKGSLGANEGPSRNLHMQRDIGGYSGSRDSVLRQNREDQPVTGFGRGRSSGGRDF
QERNSTDDPGMQEQGFRGVPGIFGQSKCFNNEVRNSPLRGSPFAPGLRGAVGGSAAEVHK
GRNEEIDSGRGPKVTYVPPPPPDDEQSIFACYQSGINFDKYDECAVEMSGLDPPTPLLAF
EEANFSQTLRKNISKTGYSKLTPVQKYSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDQM
MKDGITASVFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIR
QIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPDMP
SKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQSILQVPRLSKRDK
LIEILQSTGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALHDFRSGK
CQILVATSVAARGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDG
HLVQSLLKVLSEAHQEVPVWLEEMAVRGTSVVTSLGAHRNTAGSSRMNPAEMRMSYSQRT
FKSWE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggactgggatacggagcttctggagcaggaggcggcggcggctccccagcgg
cgttctgaggagcaggtgtggatggctaactctggcagaccaaacagcccatccctccgc
ttctccagcagaccaagcagccccttgtctggcttcccaggcagaccaaacagtcccttc
tttggctttagtcagaataaaggctcactcggtgctaatgaaggacctagcaggaatctg
catatgcagcgtgacattggaggttattctgggagcagagattctgttctacgtcagaac
agagaagatcaaccagtgactggatttggtagagggaggagttctggaggcagagatttt
caagagaggaactccacagatgatcctggtatgcaagaacaaggttttagaggtgttcct
ggcatctttgggcaaagcaagtgttttaacaatgaggtaagaaacagtcctttgcgtggc
agcccttttgccccaggattaagaggagcagttggaggttctgcagcagaagttcacaaa
ggtcgcaatgaagaaattgattctggaagaggtccaaaggtgacctacgtgccccctccg
cctcctgatgatgagcagtccatctttgcatgttaccagtcaggaattaattttgacaag
tatgatgaatgcgctgttgagatgtcaggacttgaccctcccacaccattactggctttt
gaagaagctaacttctctcagactttaaggaagaatatatctaaaactggatattcaaaa
cttactccagtgcagaagtacagcattcctgttatacaggcagggcgggatttgatgtcg
tgtgcccagacaggatcaggaaaaacagcagcttttcttctaccaattgtggaccagatg
atgaaagatggcataactgcaagtgtcttccaaaagcagcaagaaccacaatgcattatt
gttgcgccaactagagaactcataaatcagatcttcttagaagcaaggaagtttgtgtac
gggacttgtataaggcctgttgtgatctatggaggcacacaaacaggtcattcaatacgt
cagataatgcagggttgtaatatattatgtgccactcctggaaggcttctagacattatt
gaaaaagggaagatcagtttggtggaagtgaaatatttggtactagatgaagcagatcgc
atgcttgatatgggttttggattagatatgaagaagctgatttcttatccagacatgcca
tctaaagacagacgtcaaacgttaatgtttagtgccacttttcctgaagaagttcaaagg
ctggctggtgaatttttgaaaactgactatatatttcttgttattggaaatacctgtgga
gcctgcagtgatgttcagcaaagtattcttcaggttccccggttatccaagagggataaa
ctgatagaaattctacagagcacaggtggtgaacgaaccatggtgtttgtggacacaaag
aaaaaagcagattaccttgcagcctttctttgtcaagagaatttaccatccaccagcatt
catggagacagggagcagagagagagagagatagctcttcacgatttccgttctggaaaa
tgtcaaattcttgtggcaacttcagttgcagcgagaggcctggacattgaaaatgttcaa
catgttattaattttgatctccccaacaccattgaagattatgtacatcgaattggacga
actggtcgttgtggaaacactggcaaagctgtttcattctttgatgatcagtcagatggc
catcttgtacaatctctacttaaagtgctttcagaagctcatcaggaagttccagtttgg
ttggaggaaatggctgttcgaggaacaagtgttgtcacatcacttggtgcccataggaac
actgcaggcagcagcagaatgaacccagcagaaatgaggatgtcatattctcaaagaaca
tttaagtcatgggagtaa
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