KEGG   Lagopus muta (rock ptarmigan): 125687480
Entry
125687480         CDS       T09141                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03013  Nucleocytoplasmic transport
lmut03015  mRNA surveillance pathway
lmut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125687480 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    125687480 (RBM8A)
   03015 mRNA surveillance pathway
    125687480 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmut03019]
    125687480 (RBM8A)
   03041 Spliceosome [BR:lmut03041]
    125687480 (RBM8A)
Messenger RNA biogenesis [BR:lmut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125687480 (RBM8A)
Spliceosome [BR:lmut03041]
 Complex C
  Other components
   EJC/TREX
    125687480 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 125687480
NCBI-ProteinID: XP_048788597
LinkDB
Position
29:complement(18571..21624)
AA seq 235 aa
MGPNVAPRALPPLSLPLCPPQDGGNPRPVRLMLTHFRLVTSPRFRRASRRALQGGWGERG
KMADVLDLHEPSGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQ
DGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV
EYETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 708 nt   +upstreamnt  +downstreamnt
atgggtcccaacgtggcgccgcgcgcgctgccgcccctatccctccccctctgtcctccc
caagatggcggcaacccgcggcccgtgcgcttgatgctgacgcatttccggctcgtgaca
tcaccccgcttccggcgcgcttcccgtcgtgccctgcaaggcggttggggagagcgcggc
aagatggcggacgtactggatctgcacgagccgagcggcgaagacttcgccatggacgag
gatggcgacgagagcatccataagctgaaggagaaggccaagaagcggaaaggccgcggc
ttcggctcggaggaaggatcgcgagcgcgcgtgcgggaggattacgacagcgtggagcag
gacggcgatgagccgggaccacagaggtcggtggagggttggatcctttttgtcaccggc
gttcacgaggaggcgacggaggaggacatccacgacaaattcgctgaatacggcgagatc
aaaaacatccacctgaacctggacagacggacggggtacctgaagggctacacgctggtg
gagtacgagacgtacaaagaggcgcaggctgccatggaggggctgaacgggcaggagctg
atggggcagccggtcagcgtggattggtgctttgtcagagggcccccgaaagggaagagg
aggggcggccgccggcgcagcaggagtccagacaggaggcgccggtga

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