Lagopus muta (rock ptarmigan): 125687480
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Entry
125687480 CDS
T09141
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
lmut03015
mRNA surveillance pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125687480 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
125687480 (RBM8A)
03015 mRNA surveillance pathway
125687480 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125687480 (RBM8A)
03041 Spliceosome [BR:
lmut03041
]
125687480 (RBM8A)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125687480 (RBM8A)
Spliceosome [BR:
lmut03041
]
Complex C
Other components
EJC/TREX
125687480 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
125687480
NCBI-ProteinID:
XP_048788597
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All DBs
Position
29:complement(18571..21624)
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AA seq
235 aa
AA seq
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MGPNVAPRALPPLSLPLCPPQDGGNPRPVRLMLTHFRLVTSPRFRRASRRALQGGWGERG
KMADVLDLHEPSGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQ
DGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV
EYETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaacgtggcgccgcgcgcgctgccgcccctatccctccccctctgtcctccc
caagatggcggcaacccgcggcccgtgcgcttgatgctgacgcatttccggctcgtgaca
tcaccccgcttccggcgcgcttcccgtcgtgccctgcaaggcggttggggagagcgcggc
aagatggcggacgtactggatctgcacgagccgagcggcgaagacttcgccatggacgag
gatggcgacgagagcatccataagctgaaggagaaggccaagaagcggaaaggccgcggc
ttcggctcggaggaaggatcgcgagcgcgcgtgcgggaggattacgacagcgtggagcag
gacggcgatgagccgggaccacagaggtcggtggagggttggatcctttttgtcaccggc
gttcacgaggaggcgacggaggaggacatccacgacaaattcgctgaatacggcgagatc
aaaaacatccacctgaacctggacagacggacggggtacctgaagggctacacgctggtg
gagtacgagacgtacaaagaggcgcaggctgccatggaggggctgaacgggcaggagctg
atggggcagccggtcagcgtggattggtgctttgtcagagggcccccgaaagggaagagg
aggggcggccgccggcgcagcaggagtccagacaggaggcgccggtga
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