Lagopus muta (rock ptarmigan): 125687548
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Entry
125687548 CDS
T09141
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125687548 (PCDH8)
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125687548 (PCDH8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
125687548
NCBI-ProteinID:
XP_048788681
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All DBs
Position
1:163803762..163807979
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AA seq
998 aa
AA seq
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MSPLRLLAAGCLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPRAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPTFARSSVT
VELPEDAPPGSLLLDLDAEDPDEGPNGEVVYAFGSQVPPEARRLFRLDPRSGRLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVVVRLTDVNDNAPRISISALRGAGSAAGVAYVS
EAAASESFVALVSASDRDSGTNGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTLVKVRMVDQNDNPPIIIHPVLTNGSVEISVSSKTSRDALVAQIKARDADDG
ANAELTFAFLEEPQQDLFAINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQEVAKPSSWQGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNEIKNNSPLKEQIDISHLEKGRQEDSSQRGNVFEVRTFPSKTSFSGPDPSPAAEEIS
TAESSSDSTCLYEGQKRLRGAGGEQGFTATPSFGKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPNPHPPAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLYSAPSTRFLGPQTDATEKA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgccggctgcctgctggccctgtcccgctgcaagacg
gtgcgctaccgcaccgacgaggaaggggcgccgggcacggtgatcggcacgctggccgac
gagatgccggtgaaagctccgggggagatgagcttccgactgatgaggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggcgaggcggggctg
gaccgggagcggctttgcgggcaggctccgcagtgcgtgctggccttcgacgtggtgagc
tgctggagggagcgctaccgcctggtgcacgtggagctggaggtgcgcgacatcaacgac
aacgcgccccgcttcccccgtgcccagatggcgctggaggtgtccgagagcgctgctcct
ggcactcgcctcccactggaggtggccgtggacgaggacgtgggctccaactccatccag
agcttccaggtctccctcaacagccacttcggtgtggaggcgcagacgcgggcggacgga
gcgcgttgtgcggatctggtgctgctgcaggagctggaccgcgagcgccagccttcctac
accctggagctggtggccaaggatggcggcagccctgcacgctcaggcacagccactgtg
cacgtccgcgtccttgatgccaatgacaacagccccactttcgcccggagctctgtgaca
gtggaactgcccgaagatgcgccgcctggctccctgctacttgacctggatgccgaggac
cccgacgagggccccaacggagaggtcgtctatgcttttggcagtcaggtgccccctgag
gcacggcggctcttccgtctcgacccgcgttctggccgcctgactctggaagccgctgtg
gactacgagcgtactcgcacctacgagctggacgtgcgggcccaggatcgcggtgccagc
cccagggcggccacctgcaccgtggtggtgcgccttaccgacgtcaacgacaacgcgccg
cgcatcagcatcagcgccctgcgtggtgctggcagtgccgccggcgtggcttacgtcagc
gaggcggctgccagtgagagcttcgtggccctcgtcagcgcttctgaccgcgactctggc
accaacgggcaggtgcgctgcagcctgcgaggccacgaccactttgccttgcagcgggct
tacgaggacagctacatgatagtcaccacagcggcactggatcgcgagcgcatccctgag
tacaatctcactgtggtggccgaggacctgggctccccacccttcaagaccgtccgccag
tacacggtgcgggtgagcgatgagaacgacaacgcgccgctctttgccaagcccctctat
gaggtggctgtgccagagaacaacccgccaggcgcctacatcaccactgtggtggcccgt
gaccctgatcttggccacaatgggaaggtcacctatcggctgctggagacccaagtcatg
ggggccccgatctctacctacgtctcagttgaccctgccactggagccatctatgccttg
agaacgttcaactatgagatcctcaagcagcttgacctgaggatccaggccactgatgga
ggctccccacagctctccagcagcacgcttgtcaaagtgaggatggtggaccagaacgac
aaccctccaatcatcatccacccggtgctcaccaatgggtcggtggaaatcagtgtctcc
agcaagacctcccgtgatgccttggtggcccagatcaaagctcgcgatgcagatgacggg
gccaacgccgagcttacctttgccttcctggaagaaccccagcaggacctttttgccatc
aacccaagcactggagatatcgtgctgaggggcgacctctctgaagagctggggcagctg
ttcaaggtcatcctcactgtcacagacaatgggaggccccctctggccacaactgccact
gtcaactttctggtgaccgccactgctccttccagcatccaggaggtagccaagcccagc
tcctggcaagggaaggccttgcagtgggacattcctctgattgtgatcatcgtcctggcg
ggcagctgcactctcctcctggtggccatcatcaccattgccaccacctgcaacaggcgc
aagaaagggaatgagatcaaaaacaacagtcccctgaaggagcagatcgacatctcccac
ctggagaagggtcggcaggaggacagcagccagaggggaaacgtgttcgaggtacgaacc
ttccccagtaaaacctctttcagcggccctgacccttctccagcagctgaggagatctcc
actgcggagagcagcagcgacagcacctgcctctatgagggtcagaagcggctcagagga
gccggcggtgagcagggtttcaccgccactccaagcttcggcaaagagcctgctcccccc
gtggccatttggaaggggcattccttcaataccatctcaggccgggaggcagagaagttc
agcggcaaggacagcggcaaaggcgacagcgatttcaacgacagtgactcggacatcagc
ggggatgccctgaagaaggacctcatcacacacatgcagaacggtctgtgggcttgtaca
gccgagtgcaagatcctgggccactcagaccgctgctggagcccctcctgcggccgagcc
aaccctcaccccaatccccatcctccagcgcctctctccaccttctgcaaaagcacatcc
ttgccccgggacccgctccgcagggacaacttttaccaggcccagctgccaaagacggtg
gggctgcagagcgtctatgagaaggtgttgcacagagactttgaccggacgatcacgctg
ctgtcccctccgcgtcccgcgcggctccctgacctccaggagatcggggtgcccctctac
tcggccccttcaaccagattcctgggcccccagactgatgccactgagaaagcataa
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