Lagopus muta (rock ptarmigan): 125687645
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Entry
125687645 CDS
T09141
Symbol
SMG9
Name
(RefSeq) LOW QUALITY PROTEIN: nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125687645 (SMG9)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125687645 (SMG9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
NB-ARC
AAA_22
GBP
Motif
Other DBs
NCBI-GeneID:
125687645
NCBI-ProteinID:
XP_048788832
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MRSEAPRLLRQPAEFEEGLEASVGRSRPQGEEEGKRRTQEDAEGHSGAAAMSDSGQSPAP
GVRRRWPREKEGDGSGDRREPTEEPGALLPKTPIILAKPPAERVKAAAGPAPPPPGPAPP
IVLMKARGEEGRAGVGAGEGAAIAPPREREGPRPTQPVYQLHGRGLPPPGAMDPVAGQAR
LAAPEKMKSSIKLVDEQMNWCDSAIEFLLDQTDVLVVGVLGLQGTGKSTLMSLLAANQPE
EDPRAFVFRPQSPELKERGGSQTCGIDFFITQERVVFLDTQPILSPSILDHLINNDRKLP
PEYSLPHTYVEMQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPSTPSPNHE
PSGTAGPEEPSEYYPHLVFIQNRARPEAFCPRRLQQMHGILDRLMAHSHLKYKGSLSMLD
CGLFPGLPEGFLPTEVNLFLLPPMEAEAEDAPPRTAPGGGPLFPLLPPYRGHGTFGTLLA
RLRGRVLAAARAQLSHTLLTERNWFHYAARIWDGVKKSSALAEYSRLLG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgaagctcctcggttgctgcggcaaccggccgagttcgaggaagggctggag
gcttcggtaggccgcagtaggccgcaaggggaagaagaaggaaaaaggaggacgcaggaa
gacgcggagggacacagcggggccgcagcgatgtcagattccgggcagagcccggccccg
ggcgtgcggcggcggtggccgagggagaaagaaggcgacgggagcggggaccggagggag
cccacggaggagccgggcgcgctgctgccgaagacgcccatcatcctggcaaagccgccg
gccgagcgggtgaaggccgcggcaggtcccgccccgccccctcccggccccgccccgccc
atcgtgctgatgaaggcgcggggggaggaggggcgggccggcgtcggagctggggagggg
gctgcgatcgcccccccccgggagagggagggaccccggcccacccagcccgtctatcaa
ctgcacggcagggggctgcccccccccggggccatggacccggttgcgggtcaggcgcgg
ctggcggctcccgagaagatgaagagcagcatcaaactggtggacgagcagatgaactgg
tgcgacagcgccatcgagttcctgctggaccagaccgatgtcttggtggttggggtgctg
gggctgcaaggcaccgggaaatccaccctcatgtccctgctggcagccaaccagcctgag
gaggacccgcgggctttcgtcttccgccctcagagccctgagctgaaggagcgggggggc
agccagacctgcggcatcgacttcttcatcacccaggaacgcgtcgtcttcctcgacacc
cagcccatcctcagcccttccatccttgatcacctcatcaacaatgaccgcaagctgccc
cccgagtacagcctgccccacacctacgtggagatgcagtcgttacagatcgctgccttc
ctcttcaccgtctgccacgtggtgctgctggtgcaggattggttcactgacctcggtctc
tacaggttcctccagacagctgaaatggtgaaaccttccactccgtcccccaaccacgaa
cccagcggcaccgccggccctgaggagccttcagaatattatccacacctggtgttcata
cagaaccgcgctcgccctgaagccttttgcccccgccgcctgcagcagatgcatgggatc
ctggaccgcctgatggcccattcccacctcaaatacaagggctctctctccatgctggat
tgcgggctgttccctgggctcccggaaggtttcctccccaccgaggtgaatcttttcctg
ctgccccccatggaggctgaagctgaggacgctcctcctcgcaccgctcctggggggggt
cccctcttcccactgctccccccataccgaggccacggcacttttgggacccttctggcc
cggctgcggggtcgggtgctggcagctgctcgggctcagctctcccacaccctcctgact
gaacgtaactggtttcactacgctgcccgcatctgggacggggtgaagaagtcctcagcg
ttggccgagtacagccggctgctgggctga
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integrated database retrieval system
