Lagopus muta (rock ptarmigan): 125687733
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Entry
125687733 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125687733
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
125687733
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125687733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
ZapC_N
YlmH_RBD
Phage_Orf51
Motif
Other DBs
NCBI-GeneID:
125687733
NCBI-ProteinID:
XP_048788936
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MRSADKQAHAPCELSRRRMRSAELGTGCPRVADMRNCNDVLSGLWAAPVWPICGTAMKFF
PLLGLPPPQMFGLAGGNWGSNVPPTVSKDDVFDHLRNLNICQFMSPDEMHPRVLRELADV
VTKPLSMTSAKSWQSVSGDWKKSRVLVSVILGYYKKNLINEEWKYSPHQIIAVGTQWNKH
MGILIKEFMNDPYIVITALEEASIYGNVQQVVQHCVSSDRTAVLLKIMDFTPNNLQKVRV
FTNSIDEVEIVYKALKSDSIFVFKIHKEMEFNFKDFLEHWTRSYSSGSRVVLVLTDDCMQ
FLEITDVSCVIHFSFPSSPTIFGQRLHSMSDNFRNMIKDSSDQDHXQARSVIMLTENSEC
HTVGILRYLERAEADIPPGLAGVLEAEEKKKFARPLCTYLKMFGTCKNRTVCPDRHQINS
QIDVLQNMASKTTQTSGYVTVLPLHVVNATNYFGHIVDKQKDQYMILAEEINEYFKETSN
RVGAQKVEKLALCGFCEETVFQRVQVVETSSKEEGNFNIKIKYVDEGRTGQAQSSQLLHL
PVTRYIHQKIERKPHEAKVVLTLGNSVWIDSTVWVTSLKMYVNEYSVQSKILSTGLGTDN
PEHILQLQKLCEHVKLSHTKNLEPLSIKEDAASPEGVSALQNVSLKENSSENCNSSKATM
GSHLCDGVAQTKEAEDSSLHQQKCFHPKIKWFENEEAVTVKVQIARIADYKCEFSKEKVI
FSACSEGRFCLADMELYQCILTEKSACVIKDKEAILVLRKEKKGAWCKLLKNKNHHVSFD
FEYWEDDEDKSPFPVGKE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgccgacaaacaggcgcatgcgccgtgcgaactcagccgaagacgcatgcgc
agtgcagagctgggaacgggctgcccccgcgtggccgatatgcggaactgcaacgatgtg
ctctccggtctttgggctgcccccgtgtggccgatatgcggaactgcaatgaaatttttt
ccgctccttgggctgcccccccctcaaatgtttggtttagcaggagggaactggggaagc
aacgtccctcccactgtaagcaaagatgacgtttttgaccacctgaggaacctgaacatc
tgccagtttatgagtcccgatgaaatgcatcccagagtccttagggaattagctgatgtg
gtcaccaagccactctccatgacatctgcaaagtcctggcaatcagtctctggtgactgg
aaaaagtcaagggttttggtttctgttatactaggttactacaagaaaaatctcattaac
gaggaatggaagtactcaccacatcaaattattgctgttggaactcaatggaataagcat
atgggaatcttaataaaggagttcatgaatgatccttacattgtgataacagctttggaa
gaagcttccatttatggaaatgtgcaacaggttgtgcagcattgtgtgagcagtgataga
actgctgtgttactcaaaataatggattttactcctaataatcttcagaaggtgcgggtt
ttcactaattccatagatgaagtagaaatagtatataaggcactgaagagtgactcaata
tttgtcttcaaaatacataaggaaatggagtttaatttcaaggatttcttggagcattgg
acaagaagctatagcagtggcagtcgtgttgtattagttctaacagatgactgcatgcag
ttcttggagattacagatgtgtcttgtgtgatacatttcagttttccttcttctccaaca
atcttcggtcagcgtctacacagcatgtctgacaacttccgtaatatgataaaggattca
tctgatcaggaccattgacaggcaaggtcagtcataatgctaacagaaaacagtgagtgc
cacactgttggtatcctgcgctatttggagcgtgctgaagctgacattccaccaggattg
gctggagtgctagaagctgaagaaaagaagaaatttgcaaggccgttgtgcacctatctt
aaaatgtttgggacttgcaagaatagaacagtatgtccagatcgtcatcaaattaattca
caaatagatgtgctccagaatatggcatctaaaactacacaaacatctggatatgtgaca
gtgctgcctctccacgttgtaaatgcaacaaactactttggtcatattgtagataaacaa
aaggaccaatatatgattcttgctgaagaaatcaatgagtattttaaggagactagtaat
agagttggtgctcaaaaggtagaaaaactagctttgtgtggattctgtgaggaaacagtc
tttcaaagggtccaggtggtagagacttcttcaaaagaagaaggaaattttaacatcaaa
atcaaatacgtagatgaaggcagaactggtcaagctcagagctctcagcttcttcactta
cctgtgactcgttacattcatcagaaaattgaaaggaaaccacatgaagcaaaagtagta
cttactttaggaaattcagtttggattgactcaacggtctgggttaccagtttgaagatg
tatgtcaatgaatacagtgtgcagtccaagattttgtctacaggtctgggaactgataat
ccagaacatatattgcaacttcagaagttgtgtgagcacgtgaagttaagtcatacaaag
aatttggagcctttaagcataaaggaggatgcagctagtcctgaaggtgtgtctgcactg
cagaatgtgtccctaaaggaaaattcttcagaaaactgtaattcttctaaagcaactatg
gggagtcatctgtgtgatggtgttgctcaaactaaggaagcagaagactcttcactgcat
cagcagaaatgtttccatccaaaaataaaatggtttgaaaatgaagaggctgttacagtg
aaagttcaaatagcaaggatagctgactacaaatgtgaattctctaaggaaaaggtaatt
ttcagtgcctgctcagaaggcagattttgcttggccgatatggaactgtatcagtgtata
cttacagaaaagtctgcgtgtgtgattaaggataaagaggctattcttgtcctcagaaaa
gagaaaaaaggagcatggtgcaagttactaaagaacaagaatcatcatgtgtcttttgac
tttgaatactgggaagatgatgaagacaaaagcccttttccagttggtaaggaatga
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