Lagopus muta (rock ptarmigan): 125687925
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Entry
125687925 CDS
T09141
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125687925 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125687925 (LMO7)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125687925 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
125687925
NCBI-ProteinID:
XP_048789241
LinkDB
All DBs
Position
1:complement(153217613..153347105)
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AA seq
1882 aa
AA seq
DB search
MTAAVPRARPGGGLSARHALFFPAMDGREDAECGCEAAFAEAQRWVETVTGKSFGTKDFR
AALENGVLLCDLINKIKPGIVRKINRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDL
QDLSNRVTVKPEETNRRVKNVLITLYWLGRKAQSNPHYNGPYLNLKAFEKLLGQALTKAL
EESSHLNRSGRDSGYGDIWYVDRGEPFPSSASHKRDDSFDSLDSLGSRSSTSFSSDITLK
GGSEGCDSDTDSELPFKMRDSHKDDRSYRRISVIEPKPATDFNRFLPTKNKQPAYMPAPL
RKKRTEKNEDNRRSWASPVYTELDGTFSSGRERNPIASCQISRAECGLTNPASLQMIYEY
DSGSDSEDGKRMPDLVMDDLANRRFLVQKSPVSSTAPGHHFVLRDDSPKSCSQENYSPGP
LAAVLEPLSNQRRQRQLDTKVENKPGVNISPELSGYFDEDEEEEVVIPNIEKDDLYFRKL
SSSASNTVVPFDKFLPKFWTPEEELLWKKIRKSSFKPWYKEIQGFSRKKSDSEDMNFAYK
QSSALVANQPRPSFEWNSSSRRDQNYKPTAEYMGSPLSQITEGKILEASDQPSQFLLLQA
LQKYSDYLSSETKTKIDPTSGPRLIKCRKNISFIPGCDDEGDAENGYPYPDLENDDLFVR
KTGAFHMNHVVLQDPQYFRKFSEQEPPLEGEIILQPREGQPVIPDLEKDDMIFRKILSQK
KEVPLSGAPDKYHPALFPDPWSLPEEIRSKFLCLLEKDSVPEERKRSGRVLSPSSHHKRD
DMLARKIESWKVGSNMQPVNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSD
EQGSKSLNDVSAEEQQSLRKIRYEELQKIKEQLQEQDLKWQEDLAKWKNRRKSFTSELQK
KKEEREEIERRASEVSDRSSKPLKEMQQEREQKYDGRWAYSLTDDVFTEEKAPTTRSTVK
DYLFEEETSYGTKDSKSQYAAQRSKENLPNPESSAMREAPAVSKSLAEEQSSALLSTRYS
VNAQTGSAQVSASLPRSYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSLTMDDAQKYNGE
LEKAKGTQTLTSSMFSLPDSTYSLSTSVLRRRGEEEEEEKEGVKSTPTPSLTLPVKSQDR
DAGDSILKPEYCSPPDSVSLASSAENASLSEHDNSKSLEQYSELRISMNQRPGYSQNFGF
TANWTSSGALVQTVEEDSPAALCQLQVDDEIIAINGTKVSQMDRSQWEEAITRALETGNL
VMDVRRYGKNDWGKDQPSLPHVRHKILNLTSMGTNIIGTSDSKWIDATSGERVSSVSTIS
TKREFSSSLQSSGTGTKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPD
LPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYKREQEKLREEWLRAKQEAEKEN
SKYLDEEQTVITSNMITVSARAPSASSWRASPEVSTPEEPEGDGGRELAAHLLAREEERR
LQEEEEAALRVEREREHQELELERQRKEREQQYAEEQRRRAEMEEQRRQAEMEEQRQQAE
RQREMSVESSQYQRHYERYEVSKITENQPGQHLIDSRRYERYESSKTIEEQPGQSFSDRN
KSKSTSELNEFNANRNNTQSKYSERSWNTSESQKGSQKEPQKEHNLSAAELERQQILQEM
RKKTSLHTDSSWIRQRSSSVHKEPISLYSSSMRRGESLDNLDSSRTSLWRHHSRLNQSSS
TSSLSSNQDHSRPVSTSNRAYMCTPSSAKVPPVTTSVRAPPASQAAPRVQSPVSASQPGS
QMRSRSVSGKKICSYCNNVLGKGAAMIIESLGLCYHLHCFKCVACECDLGGSRSGAEVRI
RNNKLFCNDCYLRFKTGQPTSM
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggctgttccgcgcgcccgtcccggtggaggactgagcgctcgccacgcactc
tttttcccggccatggacggcagagaggatgccgagtgcggctgcgaggcggcgttcgca
gaggcgcagagatgggtggagacagttactgggaaaagctttggaaccaaagactttcga
gcagctttagaaaatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatt
gttaggaagataaatcgtctgtcaactccaattgctggcttggataatataaatgttttt
ctgaaagcttgtgaaaatattggattgaaagaagctcaactttttcatccaggagacctt
caggatttgtccaatcgagttacagtcaaaccggaggagaccaacagaagagtgaaaaac
gttttgattacattatattggctggggagaaaagcacaaagtaaccctcactataatggt
ccatatctcaatcttaaagcatttgagaagttattagggcaagcattgactaaggcactt
gaagagtccagccacctaaacagaagtggcagggatagtgggtacggtgatatttggtac
gtggaccgaggagaaccttttccatcttcagcaagccacaaaagagacgattctttcgat
agcttggactctcttggctcaaggtcctccacaagcttttcatcagatataaccttgaaa
ggtggcagtgaaggttgtgatagtgacacagactcagaactgcctttcaagatgcgcgac
tcccataaagatgacaggtcctatcgaaggatttctgtaattgaaccaaaacctgctact
gacttcaatcgcttcttacccactaaaaacaagcagccagcatatatgccagcaccccta
aggaagaaaagaacagagaagaatgaggacaacaggaggagctgggcaagccctgtctac
acagagttagatgggacattttcaagtggacgtgaaaggaatcccatagcttcctgccaa
attagcagagcagaatgtgggcttacaaatccagcttccctacagatgatctatgagtat
gacagtggctctgactcagaagatggaaaaaggatgcccgacttggttatggatgactta
gcaaatcgtagatttctagtccaaaagagccctgtaagctctactgcacctggacatcat
tttgtgctgcgcgatgactctcctaaatcttgctcacaagaaaactattcgcctggtcca
ctagctgcagtgcttgaaccactgagtaaccagaggagacagaggcagttggatactaaa
gtggaaaacaaaccaggagttaacatttctccagaattatctgggtatttcgatgaggat
gaggaagaagaagtagtcatcccaaacattgaaaaagatgatctctattttcgcaagcta
agttcttcagcatcaaatacagtggttccttttgacaaatttcttcctaagttttggact
ccagaagaagaattgctatggaaaaaaatcagaaaatcctctttcaaaccctggtataaa
gagattcaagggttcagtagaaagaaatcagattctgaggatatgaattttgcttacaaa
caaagctctgcccttgttgctaaccagccaagaccaagtttcgaatggaatagcagtagc
agaagggatcaaaactataagccaactgctgaatatatgggaagcccattgtcacagatt
acagaaggaaaaatcttggaggcttctgaccagcccagtcagtttttgttacttcaggcc
ctgcaaaaatactctgactacttgtcttctgaaacaaagaccaaaattgatcctacttct
ggccctaggctcataaaatgtagaaagaatatttcctttataccaggatgtgatgatgaa
ggagatgctgaaaatggatatccatacccagatctagaaaacgatgacttgtttgttcgc
aagactggggccttccatatgaaccacgttgttctccaggatccccagtatttcagaaaa
ttctctgagcaggagcctcctctagagggtgaaataattctgcaacctcgggaaggccaa
cctgtgattccagatttggaaaaagatgacatgatatttcgtaaaatcctctctcagaaa
aaagaagttcctttatcaggtgctcctgacaagtaccaccctgcgctctttcctgatcct
tggagtcttccagaagaaatccggtccaaatttctatgtttacttgaaaaagattcagtg
cctgaggaaagaaagaggagtggtagagtgttgtcgccatcttcccaccataagagggac
gatatgctggcacgcaaaattgaatcttggaaagtgggaagcaacatgcaaccagtaaac
tttatcccaggtccatgcagtgaagaagactggaagaagtgggaagcgatcagggaggcc
agcaaagttagacataagaaacgtcagatggtggagagactgtttcaaaagctttctgat
gagcaagggagtaaatctttgaatgatgtcagtgcagaggagcagcagtcattgcgcaaa
atccgttatgaagaactacaaaagataaaagaacagctgcaagagcaagatctaaagtgg
caagaagatctagcaaaatggaagaatcgcagaaagagcttcacttcagagttgcaaaag
aaaaaggaagaaagagaagaaatagaaaggagagcctctgaagtttctgataggagtagt
aagccactgaaagaaatgcagcaggaaagggaacaaaaatatgatggcagatgggcatat
tcactgactgatgatgtgtttactgaagaaaaagcacccaccacacgatcaacagtgaaa
gattacctgtttgaggaagaaacttcctatggcactaaggacagcaaaagccagtatgct
gcacagagaagcaaggagaatctaccaaacccagagagctctgccatgcgtgaggctcct
gctgtctcaaagagcctggcggaagagcagagctcagctcttttgtctactcgctactcg
gtgaatgctcaaactgggtcagctcaggtttcagcttctctccctagaagttaccagaaa
actgatacctccaggttaacatctgtggttacaccaagaccttttggtgtccactccaga
ggaatctcctcacttccacggtcgctcacgatggatgatgctcagaaatacaatggagaa
ttggaaaaagctaaaggaactcaaactttaaccagcagcatgttttcactaccagactcc
acatactctctctccaccagtgtactcagaaggagaggtgaggaggaagaagaggaaaaa
gaaggtgttaagtcaacacctactcctagtttgacattacctgtaaagtcacaagaccga
gatgctggagatagtattcttaaaccagaatattgttctcctcctgattctgtttcactt
gcatcttctgcagaaaatgcgagtctgtcagaacatgacaattcaaaatccctggaacag
tacagtgaattgagaatcagtatgaaccagagacctggctacagtcagaactttgggttt
acagcaaattggacttcttcaggggccttagtacagacagttgaagaagatagccctgca
gcactttgtcagctgcaggtagatgatgagatcattgctatcaacggcacaaaggtttca
caaatggaccgtagtcagtgggaagaagccatcaccagagcactagaaactggaaacctg
gtcatggatgttagacgatatggaaagaatgactggggcaaagaccagccttccctgcca
catgtaaggcataaaatcctcaatctcaccagtatgggtaccaacattataggtacatct
gatagtaagtggattgatgcaacttctggagaacgcgtttcaagtgtctcgaccatatca
acaaaaagagaattctccagcagtcttcaaagttctggtacaggaacaaaattgataaat
ggcatgcaaggagatcttggatctaatgaacaaagagcatctgaacctatttctttgaaa
aacttaaaaaggcggtcacaattttttgaacaaggaggcccggagcctgcaatgcctgat
ctcccagtcccatccattagtgctccaagtcgtcgggtttgggatcaagaagaagaacga
aaacgacaagagaaatggcaaaaggagcaggatcgtttattgcaggagaaatacaaacgg
gaacaagaaaaactgagggaagaatggctacgagctaagcaagaagctgaaaaagaaaac
tccaaatatttagatgaggaacaaactgttataacctcaaacatgatcacagtctctgca
cgagctccatctgcctccagctggagggcaagccctgaagtgagtactcctgaggagcca
gaaggagatggaggaagagagctggcagcacacttgctggccagggaagaagaaaggagg
cttcaggaggaagaagaagcagccctgcgtgttgagcgagaaagggaacaccaagaacta
gagcttgagagacaacgtaaagaaagggaacagcagtatgctgaggagcagaggcggcgg
gcagagatggaggagcagaggcggcaggcagagatggaggagcagaggcagcaagcagaa
aggcagagggaaatgtcagtggagtcatctcagtaccaaagacattatgagcgctatgaa
gtatctaaaataacagagaaccaacctggccaacatctcattgacagtaggcgttacgag
cgctatgaatcttccaaaaccatcgaggagcaacctggtcagtcgttttctgacaggaat
aaatccaagtcaacttcagagctgaatgaattcaatgcaaatagaaataatactcagagc
aagtattcagagaggtcctggaacacgagcgagtcacagaaggggtctcagaaggagcct
cagaaggagcacaacctgtctgcagcagagttagagaggcaacaaatccttcaggaaatg
aggaagaaaacatctctacacacagacagcagctggattaggcaacgcagttccagtgtg
cataaggagccaatcagtctgtacagcagtagtatgaggagaggggagtctttggacaat
cttgattcttcaagaacaagcttgtggaggcaccactcgaggttgaaccagtcctcctcc
acttcatctctgtcctctaatcaagatcacagccgcccagtgtccacatcaaaccgggcc
tatatgtgcactccttcctctgccaaagtacctcctgtgaccacctctgtgagagcccca
cctgcatcccaggcagccccgcgggtgcagtctcctgtttctgcttcccagccagggtcg
cagatgcgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaataacgttctg
ggcaaaggagcagccatgatcattgagtctcttggtctttgttatcatttacattgtttt
aagtgcgttgcctgtgaatgtgaccttgggggatcccgctctggagctgaagtcaggatc
cgaaacaacaaactcttctgcaacgactgctatctcagatttaaaactggacaaccaacc
tccatgtga
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integrated database retrieval system
