Lagopus muta (rock ptarmigan): 125687981
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Entry
125687981 CDS
T09141
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125687981
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125687981
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
ARM_TT21_4th
TPR_9
ARM_TT21_5th
TPR-S
TPR_CcmH_CycH
HEAT_Nup120
TPR_15
ARM_TT21_2nd
DUF2989
FumaraseC_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
125687981
NCBI-ProteinID:
XP_048789354
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All DBs
Position
1:complement(177001276..177052074)
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AA seq
810 aa
AA seq
DB search
MMQNVHLAPEEDEDDLYSGYNDYNPTFDTEDLENDTAFQQAARTSHGRRPPVTAKIPGTA
TSRPIDTAFGDGVSRPMTAVQAAGYTKAAIRGSLFDPLGQARGPAPPLEMKNPDSSEEKI
RQLEKKVNELIEESCTANSCGDLTLALEKAKEAGRKERVLVRQREQTATSESINLDLTYS
VLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMGNIYLKQRNYSKAIKFYRM
ALDQIPSVHKDMRIKIMQNIGVAFIKTGQYMDAVSSFEHIMSLSPNLKAGFNLLVCYFAI
GDSEQMKKAFQKLIAVPLEVDYDDKYVSPNDDPHTNLLIEAIKNDSLRQIERERKSMAED
YIMAAAKLIAPVLEPSFAAGYDWCVEAVKASHYVELANDLEINKATTYLRQRDFNQALEA
FKMFERKDSRVKSAAATNLSFLYYLEKELAQATTYADLAVSSDRYNPAALTNKGNTVFAN
EDYEKAAEFYKEALRNDCSCAEALYNLGLTYKKLNRIDGALDCFLKLHAIVGNSAQVLHQ
IAAIYEILEDPNQAIEWLMQLISVVPTDPHVLSKLGKLYDKEGDKSQAYHYYYESYRYFP
SNIEVIEWLGAYCIDTQFCEKAIEYFERAALILVPNFVFLMCRPTQVKWQLMVASCYRRS
GNYQKALEKYKVIHQKFPENVECLRFLVRLCTDMGLKEVHEYLTKLKKVEKLKEMREQRI
KSGRDGSARNRREGSAGGDAGGSKGERLSAKLKALSGTSEPYESSSSKAIDASYTDPLGP
QAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacgtgcacctagctcctgaggaagacgaggatgatctttactctggctac
aatgattataatcccacttttgacacagaggatttagaaaatgatacagcttttcaacag
gcagcaagaacaagtcatggtagaagaccccctgtgacagccaaaattcctggtacagca
acttcaagacctatagatactgcatttggggatggggtttctcggccaatgacagcagtg
caagctgcaggctacaccaaggcagctatcagaggttctttatttgatcctcttggccaa
gcaagaggtcctgctccacctctggaaatgaaaaatccagacagctcagaagagaagatt
aggcagttagaaaaaaaagtgaatgaactgattgaagaaagttgcactgccaacagctgt
ggagacttgacattggctctggaaaaagcaaaagaagctggaagaaaggaaagagtatta
gtgaggcaacgtgaacaaactgctacttcagaaagcatcaacttagatctcacttactca
gttcttttcaatctggccagtcaatatgctgctaatgaaatgtatgctgaagcactaaac
acttaccaagttatagtgaagaataagatgttcaacaatggaggtagactgaaggtcaat
atgggaaatatatatttaaaacagcggaactattccaaagcgatcaaattctaccgcatg
gctctagaccagattcctagtgtccacaaagacatgaggattaaaataatgcaaaatatt
ggagttgcatttattaaaactggccagtacatggatgccgtttcttcatttgaacacata
atgagcttgtccccaaacctgaaggcaggcttcaacctgctcgtatgttactttgctatt
ggagacagcgaacaaatgaaaaaagcattccaaaaactgattgcggttcccttggaagtg
gattatgatgacaaatacgtttcaccaaatgatgatccacatacaaacctactgattgaa
gccatcaaaaatgacagtttaagacaaatagaacgtgagaggaagtcgatggcagaggat
tatatcatggcagctgctaaactgatagcaccagtccttgagccatcttttgctgcgggc
tatgactggtgtgttgaagcagtcaaagcttcccactatgtagagctagccaatgacctg
gagataaataaagccactacttatctgagacaacgggattttaaccaggcactggaggct
ttcaaaatgtttgagagaaaggacagcagagtaaagagtgcagctgcaacaaacctttcg
ttcctttattatttggagaaggaattggcacaagcaacaacctatgcagatttagctgtc
agttctgataggtacaacccagcagcactaactaacaaaggaaacaccgtttttgcaaat
gaagactatgaaaaagcagctgagttttataaagaggctctcaggaatgattgctcttgc
gctgaagcactgtataaccttggtttaacatacaagaagttaaacagaatagatggggct
ttggattgtttcctgaaactccatgcaatagttggaaacagtgctcaggtccttcaccaa
atagcagccatctatgaaatcttggaagatcccaatcaagccatagagtggctcatgcag
ttgatcagtgtagtaccaactgacccacatgtgctttcaaaactagggaaattatatgac
aaggaaggtgataaatcccaagcctatcattattactatgagtcgtaccgttatttccct
tcaaacattgaggtcattgaatggcttggagcctattgcattgacacccagttttgtgaa
aaagccattgagtactttgagagagcagcacttatccttgtgcccaactttgtcttcttg
atgtgcagacctacccaagtgaagtggcagctgatggttgccagttgctatcggagaagc
ggtaactaccagaaagctctagagaagtacaaagtcattcaccaaaaattcccagagaac
gttgaatgcctccgatttttagttcgtctctgcacagatatgggactgaaagaagtccac
gagtatctgacaaaactgaagaaagtggaaaaattaaaggagatgagagagcagcgcatt
aaatctggcagagatggcagtgcacgtaaccgcagggaaggaagtgctggtggagatgct
ggtggtagcaaaggggaaaggctgagtgccaaactgaaagctttgtctggaacaagtgaa
ccctatgaaagcagcagcagcaaagcaatagatgcttcctacacagacccacttggccca
caagcagaaagacctaaaactgcagcaaggaaaagaacagaggaagatgactttgctgat
gaagaactaggagaggatttgcttccggaataa
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