Lagopus muta (rock ptarmigan): 125688064
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Entry
125688064 CDS
T09141
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125688064 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125688064 (NUP107)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125688064 (NUP107)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125688064 (NUP107)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125688064 (NUP107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
DOCK_C-D_N
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
125688064
NCBI-ProteinID:
XP_048789549
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Position
1:34704003..34729950
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AA seq
859 aa
AA seq
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MLEWGRAAMDRSSFGEVLSPLSTEMAKPGRKQSSQKRVSILTSLDDSIGSMTPRGQMIPR
TSSSLFRQPFTALSRSSLKQTDTSTILGAAGKSPLILQNSGLLGNQSMLDESNWTAVLSP
QQTGMFTNLDMTEDVTTSAVLLREDDPGEAATMSMYSDFLHSFLKHTSTTIFDLVDEYES
ICNNQVNILGKIVYRATPGQQKFSKTASVLWLLKQEMVTWRLLSSLYRDRIQSALEDETA
FDITVLNASEKTNVDNLFQKDALVRQSQLVVDWLESIAKDEIGNFSDNIEFYAKSVYWEN
TLHILKQRRLSAYIGSSRPLVTELDPDAPIRQKLPLDDLDREDDARLLKYLFTLIRAGMT
DEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGNEVQPVEGNPYRCIWKICCWRMAEEE
QFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDTLVEQEIRTSVVTAEEMEEL
PREYLETNWTSEKVFEELQATDKTRVIEENQEHYHVIQKFIILGDVDGLMEEFNRWLSKD
RSVLPGHLLRFMTHLILFFRTLGQQTKEEVSVEVLKTYIQRMISEKHTDLIAFYVSHLPP
ELAVAQYALFLEDVTESDQRHHCLELAKEAGLDVAAITKTVVENIRKKDAGDFSHHDHML
DTGTTEADRLKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHEAAKDVFVKIPQDSI
AEIYNQWEDQGIEASLPAEDDNAIREHLCIRAYLEAHEIFNKWFQHMNSAPQKPPLLPQA
SFTEKVAHEHKEKKYEVDYGIWKSFLDGLTSDVKEKMYNVLLFVDGGWMVDVREVGVCNA
NVYCALVRMLRRTPNEHIR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgctggagtggggccgggcagccatggacagaagcagttttggagaggtactgtcaccc
ctcagtacagagatggccaagcctggccgaaaacaaagctctcagaaaagagtttctatt
cttacatccctggatgacagtattggaagtatgacacccagaggccagatgattccccga
acttccagttcgttgtttcgccagccgtttactgcactgtctcgaagctctctgaagcag
acagacacatctaccatcctgggagcagcagggaaatctcccctgattctgcagaattct
ggtctgcttggcaatcagtctatgttggatgaaagtaactggacagcagtgctctcacct
cagcagacaggaatgtttacaaatctagacatgacagaagatgtcaccacgagtgctgta
ctgttgcgtgaggatgatcctggggaagctgctactatgagcatgtactcagattttctg
cattccttcctgaaacatacatcaactaccattttcgatcttgtggatgagtatgaaagt
atatgtaataatcaggtgaacatactggggaagatagtttacagagcaactcctggacag
cagaagttttcaaaaactgccagtgtcttgtggcttctcaagcaggagatggtaacgtgg
agactgttgtcctcactttatagggacagaatacaatctgcattggaagatgaaaccgcc
tttgatatcacagttttaaatgcaagtgaaaagacaaatgtagacaacttgtttcagaaa
gatgcacttgttcgacaaagccagctggtggtagattggctagagagcattgccaaggat
gaaattgggaacttctctgataatattgagttttatgccaaatctgtatattgggagaac
acgctgcatatcctgaagcagcgacggctgagtgcgtacattggaagttctcggcctctg
gttacagagttggatccagatgctcccataaggcagaaactgccacttgatgatttggat
cgagaagatgatgcaagattactgaagtatctcttcactcttatcagagcagggatgaca
gatgaggcacagcgcttatgcaaacgatgtggtcaggcctggagagctgcaactttggaa
ggatggaaattgtatcatgatcccaacataaatggaggaggaaacgaggtacagcctgtt
gaagggaatccatacagatgcatttggaaaatatgttgttggcgcatggctgaagaggag
caatttaacagatatgagagagcaatctatgcagcactcagtggaaacctcaagcagctt
cttccagtttgtgacacctgggaggacacagtttgggcatatttcagggtcatggtggat
acacttgtggagcaagaaatacgaacatcagtagtaactgcagaggagatggaagagctc
cctagagagtatttagaaaccaactggacttcagaaaaagtttttgaagaacttcaggca
acagacaaaacgagagttatagaggagaatcaagagcactatcatgtgattcagaaattc
attatactgggagacgtggatggtctgatggaagaattcaacagatggctttccaaagac
agaagcgtgctgccagggcacctccttcgtttcatgacacatcttattctgtttttccgc
actttgggccagcagactaaggaggaagtttctgttgaagtcctaaagacctacattcag
cggatgatatcagagaagcacacagacttaatagctttttatgtgagccacctgccccca
gagctggctgttgcccagtatgctctgtttctagaagatgttactgaaagtgatcaacgc
caccactgtcttgagttagcaaaagaagcaggcctggatgttgcagccataacaaaaact
gttgttgagaacatccgcaagaaggatgctggggatttcagtcaccatgatcatatgttg
gacacaggcacaacagaggcagatcggctgaaaatagatgtaattgactggctcgtattt
gatcctgcacagagggctgaagcactcaagcaaagcaatgctatcatgaggaagttcttg
gcatccaagaagcatgaagctgcaaaagatgtgtttgtgaagattcctcaagactctata
gcagaaatatataaccaatgggaagatcagggaatagaagcctctcttccagctgaagac
gacaatgctataagagaacacttatgtataagggcatatttggaagcccatgaaatcttc
aataaatggtttcagcacatgaactcagctccacagaagccgcctttgttgccacaagca
agtttcactgaaaaagtggcccatgaacataaagaaaaaaaatacgaggtggactatggt
atctggaaaagtttcttggatggtcttacaagtgatgtcaaggagaaaatgtacaacgtg
ttgctgttcgttgatggaggatggatggttgatgttagagaggtgggtgtttgtaatgcg
aacgtatattgtgctttggtaaggatgctgaggaggaccccgaacgaacacatcagatga
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