Lagopus muta (rock ptarmigan): 125688092
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Entry
125688092 CDS
T09141
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125688092 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125688092 (SPATA13)
Membrane trafficking [BR:
lmut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125688092 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
125688092
NCBI-ProteinID:
XP_048789595
LinkDB
All DBs
Position
1:175403963..175550316
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AA seq
1351 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSVTWKAVQPEELSSVGERGSKRSSSAADVGQAARAASGD
GGVAVSCPSLQLHACSIEGMTTFQNGCGNSNAITCVMMDNKEPPNLMTSVSHNGGYSTSD
GCEEETQDEKLSPSKIMRFFSTPRKRANSSSDRPRSLILMGNSSTWNALSSIRKMGSFKK
LKSSVLQGIQARECPDILNENGVGKHDSNGAVVRVQTNRYSYSGPLQDFQSAVDGLASDC
SDAEESDESFLRNTHRSRSIRRAYGAGRINLLDTDKAQSHHNGTRPTSPVLAEPKICEIL
VKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKATNEKQMPARTVSVTSADSD
KTNGNPERRSKRWKSPIRAKDFDRVLKLVSNVTEGAWKKDGPKSTAPSPSEQSQRTRSNS
RLHDDYSRRVSSSTDHDRKRCTSSVSSLDSSSPGTPCLQSPVAAQDKEAEMNVACAEDKN
LRTSSGIAESDSLSPTLSDIGPFPNEVFDTDSDEPKAPQQFICDAEHPHIPVRPTAPKPQ
SPSMEKVMCNMDFQCSNHHSMLSLSSTESEERGEVGPKLGRNPVCFQDAVQTVYYDDGNE
DSGISSHSQLSLNLAPGAEEKKEEVVSDDHWKKSPSQDEEKTDTQRVTPRRWGSGKRSRP
RPLSDYGQMSIRSISIPEDAVAVEAQKTDCTDGENQPGLASVGSVIQSNTVGYSRGRKRR
PISVIGGVNFYGSGPAEEIEGLLTQPTTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGL
DRVGRRRQMRTSNAAADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINEL
ISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRL
RVNQEELPENCNSIQDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDIC
EGYIRQCRKHTGMFTTAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQ
HQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKI
CKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVD
WEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRID
MDEMELVDTEDGRDKDFNINVKNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRV
REDKEMGMEISENQKKQAMQNARKSRHGKMKGVSYNGCPVPPLHQSLHPIHQRHITVPTS
IPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcaccttcaatgtagtgacagagaaagttaccttcaccttggcagcctgc
ccctccgtcacatggaaggcggtgcagccggaggagctcagctcagttggtgaacgtggg
agcaaaaggagctcaagtgcagcagatgtgggccaggcagcgagggcagcttctggggat
ggtggtgtggctgtgagctgccccagccttcagctccatgcctgcagcatcgagggcatg
accacatttcagaatggctgtgggaacagcaacgccatcacttgtgtcatgatggataat
aaggagcctccgaacctgatgacctctgtcagtcataatggggggtacagcaccagtgat
ggttgtgaagaggaaacacaagatgagaaactcagcccttccaaaatcatgcgcttcttc
tccactcctcggaaacgagcaaattccagctctgacaggcctcgctctctcattttgatg
ggcaactcttctacgtggaatgctttatcttccatcaggaaaatggggtctttcaagaag
ctgaaatcatctgttcttcaagggattcaagcaagggagtgccccgatatcctaaatgag
aacggtgtaggcaaacacgactcaaacggggcagtggtgagagttcagactaacaggtat
tcctattcggggcctttgcaggatttccagagtgcagtggatggtttggcatccgattgc
tctgatgccgaggaaagcgatgagtccttcctgaggaacacgcaccgctcacgcagcatc
cgacgggcttatggtgccggccgcatcaacctgcttgacacggataaggctcagagccac
cacaacggcaccaggccaacatctcctgtcctcgcagagccaaagatctgtgagattttg
gtgaaggactctgagaacaacaggatcatctatcggagaagcaaaagttcagataatttg
aactttctgaagaaaagctcattcaaacggaagtccacctcaaaccttactgacctcaag
gctacgaatgaaaaacaaatgccggcaaggactgtgagcgttacttctgctgactcagac
aaaacaaatgggaaccctgagaggagatctaagcgatggaagagccccatcagggcgaag
gattttgaccgagttctgaagcttgtcagtaatgttacagagggtgcatggaagaaggat
ggccctaaaagcacggctccttcccccagtgagcaatcccagagaacaaggtcaaacagc
agactgcatgatgactattcccgcagggtttccagtagcacagatcacgacagaaagaga
tgcacctcctcagtatctagtctagattcttcttcaccgggaacaccttgtctacaaagc
cctgtggctgctcaggataaagaggctgaaatgaatgtagcttgtgctgaagacaaaaac
ctcaggacatcttcaggtatcgcagaatctgatagcttgtctcctactctgagtgacatc
gggccatttcccaacgaagtgtttgatacggactcggatgaaccgaaagccccccagcag
tttatatgtgatgctgaacatcctcacattcctgtcaggccgaccgcaccaaaacctcaa
agccccagcatggagaaagtgatgtgcaatatggacttccagtgctcaaaccatcatagc
atgctgtcgttgagctccacagagagtgaggagagaggcgaagttgggccaaagctgggc
aggaatcccgtctgcttccaggacgctgtgcaaaccgtgtactatgacgatggaaatgag
gacagtggcatcagcagtcactctcagctgagcctcaatttagcccctggtgcagaagaa
aaaaaggaagaggttgtttctgatgaccattggaagaagtccccatcccaggatgaagaa
aagacagacacgcaaagggtcacacccaggagatggggctctggaaaaaggtctcggccc
agaccactctcagactatggccaaatgtcaatcagaagtatctccatacctgaagatgca
gttgctgtggaggcacagaagacagactgcacggatggagaaaatcagccaggactggct
tctgttgggtctgtgatccaaagcaatacagtaggctactccagagggcgaaaaagaaga
cccatctctgtaataggtggggtcaatttctatggaagcggtcctgcagaagaaattgaa
ggtctgctgacacaacccaccacgcggccgcccgtccccgcacaccaggtgcccccctac
aaagccgtctctgccaggttccggcccctcaccttttcacagagcactcccattggcctg
gaccgcgttgggcgacggcggcagatgagaacatctaatgctgctgcagatggcgggacc
gaatcttcagcattggtggatgacaatggcagtgaggaagattacagctacgaagagctc
tgccaagccacaccaaggtacctgcagcctggaggggaacagctcgccatcaatgagctg
ataagcgatggcagcattgtctatgcagaagctctctgggaccatgtcactatggatgat
caagagctgggcttcaaagctggagatgtcattagagtcctggaagcttccaacaaagac
tggtggtggggaagaaatgaggacaaagaagcctggtttccagctagctttgtcaggctg
cgagttaatcaggaagaactgccagaaaactgcaatagtatccaggatgaagaacaagat
gcagatattagcaagcatcgtcagaaaatagctgaaaacaaggatcagatgagaaccaac
gttatacaggaaattatgaacacagaacgagtctatatcaagcatctcaaggacatctgt
gagggttacattcggcagtgtcgcaaacatacaggaatgttcaccacagcccagctgagc
accatttttggaaatattgaggatatttacaaattccaaagaaagtttttaaaggatctt
gagaaacagtacaacaaagaagaacctcatctgagtgagatagggtcatgctttctccaa
catcaagaaggctttgctatttattcagaatattgtaacaatcatcccagtgcctgcatt
gaactttccaaactaatgaaacagggcaaataccgtcacttcttcgaggcctgtcgcttg
cttcagcagatgattgacattgccatcgatggttttcttctcacgcctgttcaaaaaatc
tgcaaataccctctgcagcttgcagaattgctcaaatacaccacgcaggagcacagtgat
tataacaacataaaagctgcttatgaggccatgaagaatgtggcatgcctaatcaatgag
cgaaaacgaagattggaaagcatagacaagattgcacgttggcaagtgtctatagtagac
tgggagggaccggatgtgttagccagaagctcggaactgatccactcaggagaactgacc
aaaatatcaaagcaaggcaaaagccagcagaggactttcttcctctttgaccatcaactt
gtgttctgtaagaaggacctactgagaagggacatcttgtattataaggatcgtatcgac
atggatgagatggagcttgtagacactgaggatggcagagacaaagactttaacattaat
gtcaagaatgcttttaagataataaacagagcaacagaagaggttcatttgttctgtgca
aaaaagcaggaggataagaagagatggatggaggcatgcgaaagtgaaaggagaagagtt
cgagaagataaggaaatgggaatggaaatctcagaaaaccagaagaaacaagccatgcag
aacgcccgtaagtcaaggcatggaaaaatgaaaggtgtaagctataatgggtgtcctgtg
cctcctctgcaccagagcttgcatcccatccatcagcgccacatcaccgtgcccaccagc
atcccacagcagcaggtcttcgccctggcagaacccaagcggaagccatccctcttctgg
cataccttcaacaaactcaccccgttcaaaaagtga
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