Lagopus muta (rock ptarmigan): 125688098
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Entry
125688098 CDS
T09141
Symbol
RNF6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125688098 (RNF6)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125688098 (RNF6)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125688098 (RNF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING_16
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125688098
NCBI-ProteinID:
XP_048789620
LinkDB
All DBs
Position
1:174845138..174853791
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AA seq
691 aa
AA seq
DB search
MDPTENISKPGIMDRSRHRAGNGNEQASSREHGHGEDERQRQLERLSREEAYYQFINELN
EDDYRLMRDHNLLGTPGEITAEELQQRLEGAKERLASQSDLENREGEGRTAGDSDVLAEN
SNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEHNNFET
TGEEYVGIDRSRMYLERRHQRAVSPVTTRTRSRMTREANSQAASTARTRSLRSSVVQSSE
AASLPISGRLRSRTRELTGLHQTNTTRHSSTTAGEQREMPERGTSTRVTRRSRSRANVRV
NTNQRLEILRLRSTLSSRSRSPLQRQGETAYSGELGQRQNRGTQQASRGRRQTAQHPQQP
AEEQARNNTQTPQPSSAAPSAGLTSEEEESGRPVAAVRRHPTITLDLQVRRIRPGENRDR
DSIASRTRSRVGMAENTVTFESDTGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGE
PSSVALRSILRQIMTGFGELSSLMETESNSEMQRGAHHLPDVQAEQNNSSSVNNSSDPSE
VSPRNGHAVEDDSERNRQSDDTRHYGRSNENQDNRQSQDANSLVENGTLPILRLAHFFLL
NEDDEDERLRGLTKEQIDNLSTRNYGDIHTEEEISKTCSVCINEYVTGNKLRQLPCMHEF
HIHCIDRWLSENSTCPICRQPVLGSDATDNG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggatcccacagagaacataagcaagcctggcatcatggatcgctctcggcaccgtgca
gggaatggcaatgaacaggcatcttcacgagagcatggtcatggtgaagatgagagacag
cgacagctggagcgcctcagcagggaggaagcctattaccagttcatcaatgaactcaat
gaagacgactacagattgatgagagaccacaacctgcttggcactcctggggaaataaca
gcagaagagttgcagcaacgcttggaaggggctaaggagcgtctggcatcacagtctgat
ctggaaaacagagaaggtgaaggtagaactgctggagattctgatgttcttgcagaaaac
tcaaatggtgattctttgcttgaatggctgaacacgtttcgtcgcacaggaaatgccact
cgcagtggacagagtgggaaccaaacctggagagctgtgagtcggacaaatccaaacagt
ggggaatttcgatttagtcttgaaatcaacataaatcacgagcataacaattttgaaacc
actggtgaagaatatgtgggtatagatcgtagcagaatgtatttagaaagaagacatcaa
agagctgtcagtccagtaaccacacgaacaagaagcaggatgacaagagaagcgaacagc
caggctgcaagcactgcaagaaccaggtctttaagaagctctgtagtgcaaagctctgaa
gcagcctctcttccaatctcagggaggctcaggagtagaacgagggaattgactggcctt
caccaaacaaatactacacgtcatagttccacaactgctggtgaacaaagagaaatgcca
gaaagaggtacttctacaagagtcacaagacgtagtagatctagagctaacgttcgggtg
aatacaaaccaaagactggaaattctgcggttgaggtctactttgagtagtcgaagccgc
tctccactgcagaggcaaggtgagactgcttattctggggaacttgggcagaggcagaat
agaggtacacagcaagctagtagaggtagaagacaaacagcacaacatcctcagcagcct
gctgaagagcaagcaagaaataacactcaaacgcctcagccttcctctgcagccccatct
gcgggattaacttcagaagaggaggaatctggtaggccagtagccgctgttagaaggcat
ccaacaattacactagatcttcaagtgagaagaattcgtcctggagaaaacagagatcgg
gacagtattgctagcagaactcgttctagagtaggaatggcagaaaacacagttactttt
gaaagtgacactggaggatttcggaggacgatatcgcgctcagaacgtgcgggtattcga
acctacgttagcaccatacggatacctctgcgtcggatttcagaaactgggcttggcgag
ccttcatcagtggctcttcggtcaatccttagacaaattatgacaggttttggagaactg
agttctttaatggaaactgaatctaactcagaaatgcaaagaggtgctcatcacttacca
gatgtacaggcagagcagaataactcaagctcagtaaacaatagcagtgatccaagtgag
gtttctcctcggaatgggcacgcagtagaagacgacagtgaaagaaacagacagagtgat
gatacacgacactatggtcgcagtaatgagaaccaggataacagacagtctcaagacgct
aacagcctggtggaaaatggaactctgcccatccttcggcttgcccacttcttcctgctg
aacgaagacgatgaagacgagcgtttaagaggtttaaccaaagagcagattgacaatctt
tctactcggaattatggggatatccacactgaggaggaaataagtaaaacatgcagtgtt
tgcattaacgaatatgtaacgggaaataagctaaggcagttaccttgtatgcatgagttt
catattcattgtatagatcgctggctttctgaaaattccacttgcccaatttgtcggcag
cccgtattggggtccgatgccacagacaacggctaa
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