Lagopus muta (rock ptarmigan): 125688103
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Entry
125688103 CDS
T09141
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125688103 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125688103 (NUP58)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125688103 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Tox-ODYAM1
NET2A_C
PSY3
Nup49_C
ASNSD1-SEP
FAN1_TPR
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
125688103
NCBI-ProteinID:
XP_048789638
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All DBs
Position
1:complement(175201716..175238484)
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AA seq
602 aa
AA seq
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MSAGFSFGAGTLGSAAAAAAGAGGGGGGGGFSFGTTAPSSTGGLNFGTLGSSTATATTSA
PSVGFGSGLFGSKPATGFTLGGTSTAGTATTIAPALTLGTPATTSAATTGFSLGFNKPAG
SATPFALSITSTSASGLSLSSALTSTPAAGTTGFTLNLGGTTAPTTTASTGLSLGGTLAG
LGGSLFQNTSTAATGLGQNALSLTLGTTAAPSSTANEGLGGIDFSSSSDKKSDKTGTRPE
DSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVV
ASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQL
RQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQY
LGYRKTFLGDAMDVFEARRTEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPA
TGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKP
SGSLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRG
KR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggtttctccttcggcgcgggcaccctgggctccgcggcggccgccgccgcc
ggagctggaggaggaggtgggggcggtgggttctccttcggcaccaccgcgccgagctct
acaggaggacttaattttggaactctgggttcttccactgctacggcaaccacatcagct
ccttcagtgggatttgggagcgggctttttggatcaaaaccagccactggctttacgctg
ggaggcaccagtacagcaggaacagcaacaaccattgctccagcactgactctgggcaca
cctgctaccacatcagcagctaccacaggctttagtttaggcttcaacaaacctgcaggt
tcagccacaccgtttgctttatctattacttctacctcagcaagtggcctgtcactatct
tctgctcttacatcaactcctgcagcaggtactactggctttaccttaaatttaggtgga
acaactgcgccaactacaactgcctccacaggcctgtccttgggagggaccctagcaggt
ttaggaggttcactcttccagaatacaagcacagcagcaacaggacttgggcagaatgct
ttgagccttactttggggacaactgcagctccttccagtactgctaatgaaggtcttgga
ggcattgattttagtagttcttcagataaaaagagtgacaaaacgggaacaagaccagaa
gacagcaaagcactaaaggatgaaaatctacctccagtaatctgccaagatgtagaaaat
ctacagaaatttgtgaaagaacaaaaacaagttcaggaagaaattagtagaatgtcatct
aaagcaatgcttaaagtacaggaagatataaaagctctgaaacagcttctgtctgtagtt
gccagtggattacaaagaaacactcttaatattgacaagctgaaaatggaaactgcgcag
gagctaaagaatgcagaaatagcattaagaacacagaaaactcctcctggtctccagcat
gaaaacacagccccagcagactacttcagaatcttggtagagcagtttgaagtacaactg
cggcagtataggcaacaaatagaagaactggaaaatcatcttgctactcaagcaaataat
tcacatataactccacaagatttgtctatggctatgcagaaaatctatcaaacgtttgta
gctttagcagcacaacttcagtccatacatgaaaacgtaaagatgctcaaagaccaatac
cttggctacaggaaaacctttctgggagatgccatggatgtgtttgaggcaagacgaaca
gaagctaagaagtggcagagcgcgccacgcgttaccactggaccgacccctttcagcaac
ataccaaatgcagcagccgttgccatggctgccacacttactcagcagcaacagcctgct
acagggccacaaccatctctgggagttagttttggaacgccattcggctcaggtattggc
actggcttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagctct
gcctttggaagcagtgccacaggagcatcgtcatttgggtttggaacaacaagtaaacca
tcaggaagtctaagtgcaggctttggcagctcgactacatctgggtttaacttcagcaat
cctggcatcacagcatcagctggcttgacgttcggggtgtctaatcctgcatctgcaggc
tttgggacaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcgaggg
aagagatag
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