Lagopus muta (rock ptarmigan): 125688267
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Entry
125688267 CDS
T09141
Symbol
TCF20
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125688267 (TCF20)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125688267 (TCF20)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Mua
Motif
Other DBs
NCBI-GeneID:
125688267
NCBI-ProteinID:
XP_048790029
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All DBs
Position
1:48477858..48593418
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AA seq
1928 aa
AA seq
DB search
MQSFREQSSYHGNQQSYPQEVHGSSRLEEFSPRQQAQMFQGFGGGTGSGRRGAAGASTAM
PGESSGHQSYQGFRKEAGEFYYMATNKDPVASGGQQPPQRRPSGPVQSYGPPQGSSFGSQ
YGSEGHVGQFQTQHSTLGGVSHYQQDYTGPFSPGSAQYQQQASSQQQQVQQLRQQIYQSH
QPLPQASSQSASSTSHLQPMQRPSTLPSSASGYQLRVGQYSQHYQPPSSSSSSSFPSPQR
FGQSGQNYDGSYSVNSGSQYEGHAVGSNAQAYGSQSNYSFQTQPMKSFEQSKLPQSGQQG
QQQQHPPQHVMQYSNAASKLSLQSQVGQYSQTEVPVRSPMQFHQNFSPISNPSPAASVVQ
SPSCSSTPSPLMPGGENLQCGQGNMSMGSRNRILQMMPQLSPTPSMMPSPNAHAGGFKGF
GLEGLQEKRLTDPGLSSLSALSSQVANLPNTVQHMLLSDALAPQKKSSKRSSSSKKADSC
TNSEGSSQAEEQLKSPLAESLDGGCSSSSEDHGERVRQLSGQSTSSDTTYKGGNLERSNS
SPAQGSQSEPSKLSTSPAAREDVASPDGKEAVVAVENAPKVNEKAVGVIVSREAMAGRVE
KSGGQEKPAQDDVSTATQTPVSASGVKEAGHAGPQPEAQGGNKGSKSGDNTNHNGEGNSQ
PSHAAVGSNFPVRTEPSKSPGSLRYSYKDNIAAGIQRNIGGFPQYPSGQEKGDFPGHSER
KGRNEKFPSLLQEVLQGYHHHPDRRYSRNAQEHSGMAGSLEGAMRPNILISQANELTNRG
LLNKSMGSLLEGPHWGPWDRKSSSAAPDMKQINLADYPIARKFEIESQSSSHEGGALSER
RSVICDISPLRQLVRDPGPHPMGHMGPEGRSGRSERLAPGLSQSVILPGGLVSMETKMKA
HSGQIKEEEFEQSKSSVSLNNKKTGDHCHSAGIKHESFRGNASPGAAVSDSAPDYIPQQE
SRSTQLRRAPGRTGSSRGKSPSQFQDLADKLKMSPGRSRGPGADLHHMNPHMTLSERVNR
GSLHSGYPQNSEGSSLAAAYHANARPHPFGDPNQSLNSQYHYKRQLYQQQQEEYKDWASS
AAQGVIAAAQHRQEGARKSPRQQQFLDRVRSPLKNDKDGMMYLQGSSYHDTGSQDPGRCI
MGSDSAQGKCTDLKHSNQKLQPHESGWDLSRQTTPAKGSGALGAASQKRFCPQESDGHRR
EEPTDLPKPSNAMLRLPGHEDQSPQNPLIMRRRVRSFISPIPTKRQPQDMKNSGSEDKGR
MMTSAKEGADKAYNSYAHSSQSQDVGKPVAKGDSFKDLPSPDGRNCPAVSLTSPAKTKIL
PPRKGRGLKLEAIVQKITSPNIRRSVSTNSAETGADTVTLDDILSLKSGPEGGSVSAHGL
EAEKRKGEMLSDQAGSASQDTAGEITLARSSEEWQGNEDDKTKKDTPETANVSKEGTGTS
AAPPPQKSGGQGRSDGSVSGTGTLTFPDSKTISPSSVFTSEPNPKPEEKDGDVTNISPKP
DGFPPKGYFPSGKKKGRPIGSVNKQKKQQQQQQLPPPPPPPPVPSQSSEGVAGGEPKPKR
QRRERRKPAAQPRKRKPRRAAPIVEPQEPEIKLKYATQAVDKTDSKNKSFFPYIHVVNKC
ELGAVCTIINAEEEEQNKLVRGRKGQRSSTPPPSNAESKVLPTSTFMLQGPVVTESSVLG
HLVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSK
TDTEEEEEQQQQKEQRSLAAHPRFKRRHRSEDCSGASRSLSRGASCKKATTEGGSGGEKT
PLDSKPSMPTSEGGTELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEAVEI
AREMKCSHCQEPGATLGCYNKGCSFRYHYPCAIDADCLLNEENFSVRCPKHKNKMVKGSL
STEQSERG
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgggagcaaagtagttaccacggaaaccagcagagctacccgcaggaa
gtgcacggatcgtcccgactggaggagttcagcccgcgccagcaggcccagatgttccag
ggcttcggaggaggtactggcagtggacgtcgcggagcagcaggagcctctacagcgatg
cctggtgagagctctggccatcagagctaccaaggtttcagaaaagaagcaggagagttt
tactatatggctaccaacaaagatccagtggcgtcaggagggcagcagccgcctcagcgc
aggccttctggaccggtacagagctatgggccccctcaagggagtagctttgggagtcag
tatgggagtgagggacacgtgggccaatttcaaacgcagcattcgacccttgggggcgta
tcccactatcagcaggattatactggtcctttctctccagggagtgctcagtatcagcag
caggcttctagccagcagcagcaggtacaacagctgagacagcagatctatcagtctcat
cagcctttaccccaggcttccagccagtctgcttctagcacctcgcacttgcagccaatg
cagcgtccatccaccctgccttcctctgcttctgggtaccagttacgagtgggtcagtac
agccaacactatcagccaccttcgtcgtcctcgtcctcctctttcccctccccacagcgt
tttggccagtcaggacagaattatgatggaagctacagcgtgaattctgggtcacagtat
gaaggccatgccgtgggttccaatgcacaggcatatgggtcccagtcaaactacagcttt
cagactcaaccgatgaaaagctttgagcagtctaagctgccccaaagtgggcagcagggg
cagcagcagcagcacccacctcagcatgtaatgcagtattcaaatgctgcctccaagctc
tctcttcaaagtcaagtgggacagtacagccagactgaagttcctgtaaggtcaccgatg
cagtttcaccaaaacttcagtccaatctctaatccatctcctgctgcatctgtggttcag
tctccaagctgcagctccaccccttctcctctcatgccaggtggagaaaatctccagtgt
gggcaaggcaacatgtccatgggttctagaaaccgaatcctgcagatgatgcctcagctt
agtcctacaccatctatgatgccaagtcccaatgctcatgcagggggattcaaggggttt
gggttggaaggactgcaggaaaaaaggctcacagatccagggctgagtagcctaagtgcc
ctaagttctcaagtggccaatctgcccaacacagtccagcacatgttgctttcagatgcc
ttggcacctcagaaaaaaagttccaaaaggtcatcctcttcaaagaaggctgacagctgc
acaaactcagaaggctcttcccaggcagaggagcagctcaagtcccccctggcagagtcc
ctcgatggtggctgttccagtagttcagaggatcatggggaaagggtgagacagctgagt
ggccagagcacaagctcagacactacctacaaggggggtaacttagaaagatccaactcc
tcaccagcacaaggctctcagagtgagccctcaaaactcagcaccagccctgcagctagg
gaagatgtggcctcccctgatgggaaggaagctgtagtggcagtagaaaatgcaccaaaa
gtgaatgaaaaggcagttggagtgattgtctcccgggaggctatggcaggtagagtagaa
aagtcaggtggacaagagaaacctgcacaagatgatgtttccacagccactcagacacca
gttagtgctagtggagtgaaggaagctggacatgcagggccacagccagaagctcaagga
ggtaataaggggagcaaaagtggagataacactaaccataacggagaggggaacagccag
cccagccatgcagctgttgggtcaaattttcctgtgagaacagaaccttccaaatctcct
ggcagtttaagatacagttacaaagataatatagcagctggcatacagagaaatattggt
ggctttccacagtatccttctggtcaagaaaaaggggattttccaggacacagtgagcgc
aaaggcaggaatgagaagtttcctagccttctacaggaggtgttacagggttaccaccat
catccagacagaaggtattctaggaatgcacaggaacattctgggatggctgggagtttg
gagggagccatgaggcccaatatcttaattagtcaagccaatgagttgacgaatagaggc
ctcttaaacaaaagtatggggtctctcctggaaggtcctcactggggtccctgggatagg
aagtctagcagcgcagcccctgacatgaagcagataaatttagctgattaccctattgct
agaaagtttgagatagagtctcagtcttcttctcatgaagggggagcactctcggagagg
agatcagtgatctgtgacatatctccattaaggcagcttgtcagagatcctggtcctcac
ccaatggggcatatgggtcccgagggcagaagtggaaggagtgaacgtcttgcccctggc
ttaagtcagtcagtaatactccctggtggcttagtatccatggaaacaaagatgaaagct
cacagtgggcaaataaaagaagaagagtttgaacagtcaaagagctcagttagtcttaat
aataaaaagacaggagaccattgtcattctgctggcatcaagcatgagtctttccgaggc
aatgctagccctggagctgcagtctccgattctgctccagactacattccccagcaggag
agcagatcaacacagctgagacgagcacctggcagaactggaagcagcaggggtaaatca
ccttctcaatttcaggatcttgctgataagctgaaaatgtcaccgggcagaagcagaggc
ccaggagcagatctgcatcacatgaacccacatatgacgctatctgaaagagttaacagg
ggttccttgcattctggctaccctcagaactcagaaggctcatctttggctgcagcatat
catgcaaatgctaggcctcatccttttggtgaccccaaccagagtttaaattcccagtat
cattacaagagacagctataccagcagcagcaagaggaatacaaagattgggcaagcagc
gctgctcagggtgtgattgctgcggctcagcacagacaggaaggagccaggaagagccca
agacaacagcagtttttggacagagtaaggagtcccttgaaaaatgacaaggatggaatg
atgtaccttcagggtagctcttaccatgatactggaagccaggatcctgggcgctgcatt
atgggaagcgacagtgcacagggcaagtgcactgacctaaaacacagtaaccagaagctg
cagccgcatgaatctggttgggacctctctcggcagactacacctgccaaaggcagcggc
gctctgggagcagccagccaaaaaagattttgcccccaagaaagcgatgggcacagacga
gaggaacctacggatttgcccaagcctagcaatgccatgctcaggctccctggccacgaa
gaccagtctcctcaaaatcccttaattatgaggaggagagtccgttctttcatctctcct
atccctaccaaaagacagccacaggatatgaagaacagtggcagtgaagataaagggcga
atgatgacatcagcaaaagaaggagctgataaagcgtacaactcttatgcccattcatct
caaagccaagatgttggcaaaccagttgcaaagggagattccttcaaggacctgccaagt
cctgatggtaggaattgtcctgctgtttccctcacaagcccggctaagaccaaaatattg
ccaccaagaaaggggcgaggattaaaactggaagcaattgttcaaaaaattacatctccc
aatattcggagaagtgtttccaccaacagtgctgaaactggtgcagatactgtcactctt
gatgacatcctgtcccttaagagtggacctgagggaggaagtgtgtctgcacatgggctg
gaggctgagaagagaaaaggagagatgttgtcagatcaagcggggtcagcaagccaggac
acagctggtgaaataactcttgcacgatcctcagaagagtggcaaggcaatgaggatgat
aaaaccaaaaaagacacccctgaaactgccaatgttagtaaagaagggacgggaaccagt
gcagcaccacctcctcagaagtcaggtggtcagggaaggtccgatggatccgtaagcgga
actggaactctgacctttccagactcaaaaacaatttctccctccagtgtgtttacttct
gaaccaaacccaaagcctgaggaaaaagatggagatgtgacaaacatttcacccaagccg
gatggcttccctccaaaaggatattttccttctggaaagaaaaagggaagaccaattggg
agtgtgaacaagcaaaagaagcaacaacagcagcagcaactgccaccacccccaccacct
ccacctgtaccttctcagtcttcagagggggtcgctgggggtgagccaaaacctaagagg
caaaggagggagaggcgaaaacctgcagcacagccacggaagcggaagcctagacgggcc
gctccgattgtggagcctcaagagccagagatcaagcttaaatatgctacccaggctgtg
gataaaactgactccaagaataaatcctttttcccttacattcacgtggtaaacaagtgt
gaactaggagctgtgtgcacaatcattaatgcggaggaagaggagcagaacaaattggtg
aggggtcggaaaggacagaggtcttcaacaccccctcctagcaacgcggagagcaaagtg
ctgcccacctcaactttcatgctgcagggccctgtagtaacagagtcttctgtcttgggg
catctggtttgctgcctgtgtggcaaatgggccagctatcgtaacatgggtgacctcttt
ggtcctttctacccccaggattacgcagccaccttgcccaagaacccacctccaaagagg
gccacagaaatgcagagcaaggtcaaggtacggcacaaaagtgcttctaatggttccaag
acagatacagaggaggaggaggaacagcaacaacagaaggaacaaagaagcctagctgct
catccccgctttaagaggcggcaccgctctgaggactgtagtggagcctctcggtcactt
tcaaggggagcttcttgtaaaaaagcaaccactgaaggtggcagtggtggtgaaaagact
cctttggactcaaagccctctatgcccacttcagaaggtggcactgagctggagttacaa
attcctgaactacctcttgacagcaatgaattttgggtccatgagggttgtattctctgg
gccaatgggatctacctggtctgtggcaggctctatgggctgcaggaagctgtggagatt
gcaagagagatgaaatgttcccattgccaggaaccaggagccaccttaggctgctacaac
aaaggctgctccttccgataccattacccatgtgccatcgatgcagattgtttactaaac
gaagagaatttctcagtgaggtgccccaagcacaagaacaagatggtgaaaggcagcctc
agcacagagcagtcggagcgggggtga
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integrated database retrieval system
