Lagopus muta (rock ptarmigan): 125688597
Help
Entry
125688597 CDS
T09141
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
lmut03015
mRNA surveillance pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125688597 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
125688597 (EIF4A3)
03015 mRNA surveillance pathway
125688597 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125688597 (EIF4A3)
03041 Spliceosome [BR:
lmut03041
]
125688597 (EIF4A3)
03009 Ribosome biogenesis [BR:
lmut03009
]
125688597 (EIF4A3)
03012 Translation factors [BR:
lmut03012
]
125688597 (EIF4A3)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125688597 (EIF4A3)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125688597 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
125688597 (EIF4A3)
Spliceosome [BR:
lmut03041
]
Complex C
Other components
EJC/TREX
125688597 (EIF4A3)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
Helicases
125688597 (EIF4A3)
Translation factors [BR:
lmut03012
]
Eukaryotic type
Initiation factors
eIF-4
125688597 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125688597
NCBI-ProteinID:
XP_048790730
LinkDB
All DBs
Position
2:complement(93870605..93877110)
Genome browser
AA seq
412 aa
AA seq
DB search
MSGSAGSGGTTGSARKRIMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE
KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA
VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR
AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI
LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtccgcgggctccggcggcaccaccggctcggcgaggaagcggatcatgaag
gaggaagacatgacgaaggtggagttcgagacgagcgaagaggtggacgtgacgcccact
ttcgacaccatggggctgagggaggacctactgcgcggcatttacgcctacgggttcgag
aagccgtcggccatccagcagagagccatcaagcagatcatcaagggccgcgacgtgatc
gcgcagtcacagtcgggaacggggaaaacagcgacgttctccatctctgtgctacagtgt
ctggacatacaggttcgtgagacccaggcattgatcttagcaccaactcgagagctggct
gtgcagattcagaagggtcttcttgctctgggagactacatgaacgtccagtgtcacgcc
tgcatcggggggaccaacgtgggtgaagatatccgaaagctggattacgggcagcatgtt
gttgctggcactccaggccgggtgtttgatatgatccggcgacgaagtttaaggactcgt
gctatcaaaatgctggttttggatgaagcagatgaaatgctcaacaaaggtttcaaggag
cagatttatgatgtgtacagatatctacctccagctacacaggtggtgctgatcagtgcc
actttgcctcatgaaattctggagatgaccaacaaattcatgacagaccccattcgcatc
ttggtgaaacgtgatgaattgacccttgaaggaatcaagcagttttttgtggctgtggag
agggaagaatggaagttcgacaccttgtgcgatctctacgacacgctcactatcacccag
gctgtcatcttctgtaacaccaagagaaaggtagactggctcacagagaaaatgagagaa
gccaacttcaccgtttcatccatgcatggggacatgccacagaaggagagagagtccatc
atgaaagaattcagatctggtgcaagccgagtccttatttcaacagatgtttgggctaga
ggtctggatgtgcctcaggtatccctgatcattaattacgacttacccaacaacagagaa
ctgtacatacacagaattggccgctcaggccgttatggccgaaaaggtgtagcaatcaac
tttgtgaagaatgacgacatccgcatcctgagagacattgagcagtactactccacccag
atagacgagatgcccatgaacgttgctgatcttatctga
DBGET
integrated database retrieval system
