KEGG   Lagopus muta (rock ptarmigan): 125688688
Entry
125688688         CDS       T09141                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03410  Base excision repair
lmut04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125688688 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125688688 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125688688 (PARP4)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125688688 (PARP4)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT WGR-like_PARP4 PARP VWA_3 VIT_2 VWA VWA_2 BRCT BRCT_2 VWA_CoxE PTCB-BRCT
Other DBs
NCBI-GeneID: 125688688
NCBI-ProteinID: XP_048790942
LinkDB
Position
1:complement(177445440..177488713)
AA seq 1617 aa
MFRRAMTIFANCVFFIKVKHLPIQKRNSLKACITENGGVINFVLNNKCTHVLVDNASVLS
RHDLKITQKYQLPVLYADFVWKSVENEKLLITDAFEVNTSQGNISNQWPGGHGLEDLSPS
ENKIATNQNESNDTNLTVIGESDKRIEFKVGTLRFYSENAPFFPQDFEVAKYNVLEKINS
KGSKDFVVIELHCSQEQFEFLFRLYAHFSASNGTKKNKQFIINKTAEEIRENYDILVANL
KSQDFLLRETFPPEAECLASTKLQKLLLEESINSSAVCQEVSDFVELIWAEALGHLDNLL
LESVNNISLNDVSKAEGILLQVKNALNEGADEAALQEMMMEFYQLIRHKTEIDYEVSKRL
LSRKQDLCQLMRDMLNIRETSMSCPNPSSLAKYQALRCKIDAIDPMSDEFLSVERQVLKN
NYNGCSVRILQVYRIGRVSETAEFVGSLGNVRSLFHASSVRNFMGILSRGLLMPKVVVED
HGVERTDTGNLGSGIYFSDSVSASIKYSSPSEMDGTRLLAVCDVALGSCLDLYKRDFSLT
AAPSGYSSVHGVRTTAGISSDFEDDEFVVYKTTQVKIRYVVKFCLAEDQIKQFQPEIGVQ
TEQDNTELESQCHSQNESYELPSANISNTVKIGLQDRLGNPVPLESVHIKARIIDFVAQV
VMFQTYTNQNSSPIEAKYVFPLDDKAAVCGFEAFVNGTHIIGQVKEKQQAHREYRKAINE
GDGAYLLDQDAPDIFVITVGNICPNSTVLIKVTYITELSCQNGCITFHMPASVSPWQQDK
ALNENTQDTIKKICVKQVETLKNRFSLDMSIEMPYSIESLHSWTHKLKIKKTECKAVIKT
VDNSSLDSSGFGLDIWISHAYAPRMWVEKHPNKNSEACMLVFQPEFEAAFDEEQLSSEII
ILLDCSNSMAGSALLQAKQIALHALKLLSSRQNVNVIKFGTNFSEFSSFSKNTFKDLASL
TEFITSATATMGNTDLWKSLRYLSLLFPSQGHRNILLISDGHIQNESVTFQLVKDNVHHT
RLFTCGVGSTANRHMLRSLSQYGAGVFEYFDSKSKYNWEAKIQSQVSRIFSPGCSSVSIK
WQQFDINAPKPMQAPAQIQSLFTNERLLVYGFVPHCTQATLRAIINDQELQTVVSTTELQ
KTTGTVLHKLTARAFIRDYEDGILHENETEHEMKKQILKNMIIRLSLENSIITQFTSFIA
VEKRDTREICSANVPNILEIIAQEDVDFLPYMNWEQKPVGSGVIFSEPYRMPPCDAALQD
SEAWSDYFTTERCETEGFQFQLEELSVNQESTSQEVTPQDYGFHDGDITMMKCSRTMSSL
PCKSSVTALFFGSGREAGGEAYITQKNLLPTPAVPDSGAHLRFCELPMYCSPQSLFGGMK
YDNSSVDHIPNLTVLSSRTSTHSSHKTERQVTPNSPAPQHCEKKKLKPKYRKKIVIGLHD
ATAAEQKFPESAELLVQPRCFITTEKERSQQKLEFTPVIWEEIFDLQNQDGSWNLSPQLG
KILKFDVDYLINHFLIRKGIQSLGTNGKEKLLKLIATLLVLQFIRCAKELQGIVFKSLMK
LDNLTASSGVHWAFESIKKATEWVKRVEGQFASICYRLELGKDWDSATKKILGIECN
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgttcaggagagcaatgacaatctttgcaaactgtgtgttctttattaaagtgaagcac
ttgcccattcagaagaggaacagcctgaaagcatgcataacagaaaatggtggagtaatt
aattttgtgcttaataacaaatgtacacatgttcttgtggataatgccagtgtcctcagt
cgtcacgatctaaaaattactcagaaatatcagctgcctgttttatatgcagattttgtc
tggaaatcagttgaaaatgagaagcttttaataactgatgcatttgaggttaatacatca
caaggcaacatttctaaccaatggccaggtggacatggtttggaagacttgtcaccttct
gaaaataaaattgccacaaatcaaaatgaaagcaatgataccaatcttactgttatagga
gaaagtgacaagagaattgaattcaaagtgggaactctcagattttacagtgaaaatgct
cctttttttcctcaagattttgaagttgcaaaatacaacgtccttgaaaaaattaactcc
aagggaagcaaggattttgtagttattgaattacattgttctcaagaacagtttgagttt
ctgtttcgattatatgcacacttcagtgcttcaaatggaaccaagaaaaataaacaattc
ataataaataagactgctgaagaaataagagaaaattatgatattcttgttgcaaacctg
aagagccaggatttcctgctcagagaaacttttccaccagaagcagaatgtttggcttct
acaaagttacaaaagttacttctagaagaatccatcaattcaagtgctgtatgtcaagaa
gttagtgattttgtggagttgatctgggcagaagctcttggccacctggacaatctactg
cttgaatcagtaaacaacatcagcctaaatgatgtgagcaaagcagaaggtattttgctt
caggtaaagaatgcactcaatgagggagctgatgaggcagcactgcaagagatgatgatg
gaattctatcagcttatacgtcacaaaactgaaatagactatgaagtttccaaaaggctg
ttatctagaaaacaggacctgtgccagctcatgcgagacatgctgaatatacgggaaaca
agtatgtcgtgcccaaacccatcatctctggccaaataccaggccctgaggtgcaagatt
gatgccattgatccaatgagtgacgaatttctcagtgttgaacgacaagtgttaaaaaac
aattacaatggctgttcagtgagaattttacaagtatacaggattggcagagtaagtgaa
acagcagaatttgtgggcagtcttggaaatgttcggtctttattccatgcatcatctgta
aggaatttcatgggaattctttccagaggactcctaatgccaaaagtggttgttgaagat
catggtgtggaaagaactgacactgggaatctgggaagcggcatttacttcagtgattct
gtcagtgccagcattaagtattcttcacccagtgaaatggatggaacccgactcctggcg
gtttgtgatgtggcacttggatcctgcttagatttgtacaaacgagatttttcattaact
gctgccccatcaggttacagcagcgtgcacggagtgcgcacaacagcaggcatctcttca
gactttgaggatgatgaatttgttgtgtacaaaactacacaggttaaaattagatacgtt
gttaagttttgcctcgctgaagatcaaataaaacaattccagcctgaaattggggtgcaa
actgagcaagataacactgagttggagtcacagtgtcattcacagaatgagagctatgaa
ttacccagtgcaaatatttcaaatacagtgaaaattggtcttcaagacagactgggaaat
cctgttcctctggaaagtgttcatatcaaggcaaggataatagactttgtagcacaggta
gtgatgtttcagacctacaccaatcaaaacagtagtccaattgaagctaagtatgttttt
cctttggatgataaagctgctgtttgtggatttgaagcttttgtcaatggaacacacatc
attgggcaggttaaagaaaagcaacaagcgcatagagaatatcgcaaagctatcaatgaa
ggtgatggagcttatctactggaccaggatgcaccggatatttttgtaataactgttgga
aatatatgtccaaactctacagtactgatcaaagtcacctatatcactgaactgagttgc
cagaatggttgtatcacctttcatatgcctgcctctgtgtccccatggcaacaggacaaa
gcactgaatgaaaacacacaggatacaataaaaaagatttgtgttaaacaagtagaaaca
ctgaaaaacagattctccttggatatgtctattgagatgccatatagcattgaaagccta
cacagttggacgcataaacttaagataaagaaaacagaatgcaaggctgtaattaagacc
gtagacaacagttctttggacagcagtggctttggtctagatatatggatttctcatgcc
tacgcaccccgaatgtgggtagagaagcatcccaacaaaaatagtgaggcttgcatgctt
gtattccaaccagagttcgaagcagcatttgatgaagagcagctgtccagtgaaattatt
attttactagattgctcaaattctatggcaggttcagctctattgcaagcaaagcagatt
gctttacatgccttaaaactgcttagttccagacaaaatgtaaatgtaatcaaatttggc
acaaatttctcagaattttcttcattttcaaagaataccttcaaggatttggcatcacta
actgagtttattacatctgctacagcaacaatgggaaacactgatttatggaagagcttg
cgttacttaagtttgctatttccttctcaaggacatcgtaacattcttcttatatctgat
ggacacattcagaatgagagtgtgaccttccagcttgtgaaagataatgtccaccatacg
aggttattcacatgtggtgttggttccacagcaaatcgacacatgctgagatctttgtcc
cagtatggtgctggagtgtttgaatactttgactcgaaatcaaagtataactgggaggca
aagatacagagccaagtatctagaatattttctccaggatgcagttctgtttctattaaa
tggcaacagtttgatataaatgcaccgaagccaatgcaggctcctgctcaaatacagtct
ttgtttaccaatgagaggcttctcgtctatggatttgtccctcactgtactcaggccacc
ttaagggcgataataaatgaccaagaactacaaactgtggtgtcaactactgaattacag
aagacaacaggaacggtgctacacaaactcacagcaagagctttcattagggactatgaa
gatggtattcttcatgagaatgaaacagagcatgagatgaagaagcaaatcttgaagaac
atgattatacgtctcagtttggagaactcgattataacccagtttacaagcttcattgcg
gttgagaagagggatactagagaaatttgttctgctaatgttccaaacatcctggaaatt
atagctcaagaagatgttgattttttaccttacatgaactgggaacaaaagccagtggga
tccggcgtcatattttcagaaccttacaggatgcctccatgtgatgcagctctgcaagat
tctgaagcttggtcagattatttcacaactgagaggtgtgaaactgaaggctttcaattt
caacttgaagaactttctgttaatcaagaaagcacctcacaagaagtcacaccacaggac
tatggatttcatgatggtgacatcacaatgatgaaatgttcaagaacaatgtcatcttta
ccatgtaaatcttctgtgactgctttattttttggctctggacgagaagcaggaggagaa
gcttatataactcaaaaaaatttacttccaacacctgcagttccagattcaggtgcccat
ctgagattttgtgaacttcccatgtattgttctcctcaaagtctttttggaggaatgaaa
tatgataattcttctgttgatcacattccgaatctaactgtgttaagttcacgtacaagc
acacactcttctcataagactgagagacaagttactcccaattctcctgctccccaacac
tgtgaaaaaaaaaaattaaagccaaagtataggaagaaaatagtaataggtctgcacgat
gctacagctgcggaacagaaatttcctgagagtgctgaacttctggtacaaccaaggtgt
tttataacaacagagaaagaaagaagccaacagaaacttgagtttactcctgtaatctgg
gaagaaatttttgatctccaaaatcaggatggctcttggaatctcagtccacagttggga
aaaatcttgaaatttgatgttgattatttaattaatcatttccttattagaaaaggcatt
cagtcactcggcacaaatggaaaagaaaagctactgaaattgattgctactcttcttgtg
ctacagttcatacgctgtgcaaaggaactgcaagggatagtcttcaaatcactgatgaaa
ctggataatttaacagcttcaagcggtgttcactgggcgtttgagtccatcaagaaagca
acagagtgggtaaaaagagttgagggacaatttgcatctatttgctatcgacttgaactt
gggaaagactgggattctgccaccaagaagatactggggatcgagtgcaactga

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