Lagopus muta (rock ptarmigan): 125688733
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Entry
125688733 CDS
T09141
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125688733 (ZC3H12C)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125688733 (ZC3H12C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125688733
NCBI-ProteinID:
XP_048791043
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All DBs
Position
1:complement(177882260..177923961)
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AA seq
918 aa
AA seq
DB search
MGRKLRFLLSLRLSRVVICGKELSGLRFSICKDKNSKEYGALYIQEYKKNSKVESSTCSS
FMGLKDHLGRDLGHLYVASTGTQINAIVPWSMAEKPTMDKVNSRKEDVDKEASEETSGSS
SCDSEEGTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQ
TVPKEVEKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKT
ETDQSVTNANTSVMRETSSIESQRSESPLQEDVTEDGDNLRPVVIDGSNVAMSHGNKEVF
SCRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRR
VQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFM
PPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVAD
ELRAMSRSTAAKTTSEGGLVKSNSVPCSTKNDSTSELKRATPKRQSDPSIRTQVYQDLEE
KLPTKNKLETRSVPSLVSIPSSSAAKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMA
TKNHGTPMPYDQYPKCESPVDVGYYSMLNAYSSLSISGPRSPERRFSLDTDYRISSVASD
CSSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNSQPFLQSYHEPLT
RVQSYSHEEPKHHHKPPIPYMAVHFQHPSIGARSSCPNDYSASQSSSHSKTVHMGRALVS
TRIDSISDSRLYDNSPLRHRKPFAGQDGLGSWDRQGYGVDAYGYRQTYSLPSNPTQPCYE
QFAFQSLPEQQDQTWRVPYCGIPQDPPRHQDTREKVYINLCNIFPPDLVRIVMKKNPHVT
DAQQLAAAILVEKSQLGY
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaaattaaggtttctactaagtctgaggctgagtcgggttgtgatctgtggc
aaggagctctccggtctccgtttctccatctgtaaagacaagaacagtaaggagtacgga
gcgctttatattcaggaatacaagaaaaacagcaaagtggagtcaagtacatgcagcagc
ttcatgggcttgaaggatcatctggggcgtgacttaggccatctttatgtggcgagcact
ggcacacaaataaatgcaattgtaccttggtcaatggcggagaagccgacgatggataag
gttaattctaggaaagaggatgtagacaaggaggcatctgaggagacttcgggaagctcc
agctgtgactctgaagaaggcacaaattccgataatgattcagagagactgaataattct
gcatcagaatcacatttattgcctaagactcaccgacagctgtgccgatctccttgttta
gagcctcatatactaaaaagaaatgaaattttgcaagactttcggatagaagaggctcag
acagtaccgaaggaagtcgaaaagccccctgatgtggtgaaagaatatcaaaccaaactg
gagtttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaactt
ggtactgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaact
gagactgatcagtctgttactaatgctaacactagtgtaatgcgtgaaacgtcttccata
gagtctcagaggtcagaatctccactgcaggaggatgtgacagaggatggtgacaacctg
aggccagtagttattgatggcagcaatgttgcaatgagccatgggaacaaagaagtcttt
tcttgtcgaggaatcaaattggcagtagattggtttttggaaagaggccacaaggatgtc
accgtgttcgtgccagcgtggaggaaagaacagtcgagacctgatgcccttatcacagat
caagaaatcttgcgtaaattggagaaagagaagattcttgtattcacaccgtcccgccga
gtgcaagggagaagggtggtgtgctacgatgaccgatttatagtgaagctggcctttgag
tcagatggcatcattgtttctaatgataactacagggatctagcaaatgaaaagcctgag
tggaagaagttcatagatgaacgcttgctaatgtattcgtttgttaatgacaaatttatg
cctcctgatgatcctcttggccgccatggcccaagtctggataattttcttaggaagaag
cctattgtgccagaacacaagaagcagccgtgtccatatgggaagaaatgtacctatgga
cacaaatgcaaatactatcacccagaaaggggaaatcagcctcagcgatctgtagctgac
gaacttcgtgccatgtctagaagtacagctgccaaaactacaagtgaaggaggactggta
aaaagcaatagtgttccctgtagcactaagaatgacagcacttctgagcttaagcgtgcc
actccgaagaggcagtcggatcctagtataaggactcaagtctatcaagacttggaggaa
aagcttcccaccaaaaacaaattagaaaccaggtctgtaccttcgttagttagtatacca
agctcctctgctgcaaaaccccaaagtactgcacctttaaccaacggccttccatctgga
gttcattttccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggca
accaaaaatcacggaacaccaatgccttacgaccagtatccaaaatgcgagtctccggta
gatgtagggtattactctatgctgaatgcatattcaagtctgagtatatctggtccacgc
agtcctgaaaggcgcttctccttggacacagattacaggattagctctgtagcttctgac
tgcagtagtgaagggagcgtcagctgtggcagcagtgattcctatgtgggttacagcgat
cgctcgtacatgagctctcctgacccgcagctggaggagaacttgaagtgccaacatatg
cacccgcatggccgccttaactctcagccattcctacagagctaccacgagcctctaaca
cgagtgcaaagttacagtcacgaagaaccaaagcatcaccacaaacctccaattccgtat
atggctgtgcatttccagcatccaagcatcggtgctcgttctagttgtccaaatgactac
tctgcatctcagagttcgtcgcactcaaagaccgtgcacatggggagagcccttgtgtcc
acgaggatagatagcatttcagactcacgtttgtacgataattctccgttgagacacaga
aagccttttgctggccaagatgggctgggaagctgggacaggcagggctatggggtggat
gcctacggctaccgtcagacctactctctgcccagtaaccccacacagccgtgttacgag
cagtttgccttccaaagcttaccggagcagcaggaccagacgtggcgtgtaccgtactgt
ggaatccctcaagaccccccgaggcaccaagacaccagggagaaggtgtacatcaacctg
tgcaacatcttcccccccgaccttgtgaggattgtcatgaaaaagaaccctcacgtgaca
gacgctcagcagctcgccgcagccatcttagtggagaaatctcagctaggttattga
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