Lagopus muta (rock ptarmigan): 125688770
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Entry
125688770 CDS
T09141
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04517
IgSF CAM signaling
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125688770 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125688770 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125688770 (SPTBN1)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125688770 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
125688770 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
125688770
NCBI-ProteinID:
XP_048791145
LinkDB
All DBs
Position
2:106800940..106923418
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIKERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
AIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRKPP
TPEPSPKVAEDGGSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKATAAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattacgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgctctcgcatcaaggccctcgctgatgaacgtgaggcagttcagaagaagactttc
accaagtgggttaattcccacttggcacgtgtgtcatgcagaattacagatctgtacacc
gaccttcgcgatggaaggatgctcatcaaactcctggaagttctttcaggagagagactt
cccaaaccaactaaaggaaggatgcgcatccattgcttggagaatgttgataaagccctg
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacagactgacacttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaggatgcactgctt
ttgtggtgccagatgaagacagctggttaccccaacgtcaacatccacaacttcacgaca
agctggagggacgggatggctttcaatgcactgatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcaacaccttggtcttactaagctcctggaccctgaggatatcagtgttgatcat
cccgatgagaagtcaatcatcacctacgtggtgacatattatcactacttctccaaaatg
aaagctttagctgttgaaggaaaacgcattggaaaggtgctcgacaacgccattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgaccttctggagtggattgagcaa
accattatcatcctcaacaaccgcaaatttgccaactccctcgttggtgtgcagcagcag
ctgcaggcgttcaacacctaccgcacagtagagaaaccacccaagtttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtc
tacatgccaagggagggcaaactcatctctgacataaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctggtttctcaggataactttggctttgaccttccagcagtggaggctgca
acaaaaaagcatgaggccattgaaacagacattgcagcatatgaagagcgagtgcaggct
gtggttgcagttgcgaaggagcttgagactgaaaattatcatgatatcaaacgcatcact
gcaagaaaggacaacgttatacgcctgtgggagtacctcctggagctgctcagggcacga
aggcaacggctggaaatgaatcttggcctacaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtcacaagactatggcaaacacttg
ttaggagtggaagacctgttgcagaaacatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaaatttgccaccgatggagaaggt
tacaagccgtgtgacccgcaggttattagggaccgcgtcgctcacatggagttctgttac
caagagctgtgccagctcgcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggagcagatc
ctttcgtctgatgactacgggaaggacctaaccagcgtcgtccgtctcttgagcaaacat
aaggcatttgaagatgaaatgagtggtcgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaaaatcaaagaaagaattaag
gacattcgggagcagtgggctaacttggaacagttatctgccattaggaagaaacgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgacgacattgatgcgtggatg
ttggacatcctcaaaattgtctccagcaacgatgttggccatgatgaatattccactcag
tccttggtcaagaaacacaaggatgttgctgaagagattgcaagctaccggccaaccatt
gactcgcttcatgaacaggcaaaggctctaccccaggagcatgccggctctccagatgtg
caaggcaggttgtctgggatagaagaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggctttgcaggatacccttgctctttataagatgttcagtgaggcagatgct
tgtgagctttggattgatgagaaggagaagtggctgaataatatgcagatcccggagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagagccagaaatgaacaat
caggcttcccgtgttgcagtcgtgaaccaaattgcaagacagctaatgcacagtggccat
ccaagtgagaaggagataaaagcacagcaagataagctcaacacaagatggagccagttc
agagaactggtagacaggaagaaggatgccctgatctctgccttaagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggagaaaaccaaagtgattgaatcc
acacaagatctgggtaacgatctggctggagtgatggctctgcagcggaagctgacgggc
atggaacgcgacctggtagccattgaagctaagctcagtgacctgcaaaaggaggcagaa
aagctggaatcggagcatcctgaccaggcacaagctatcctttcacggcttgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctgaagaaccgggaggagtctcttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaatcgcctccgaagacatgccgaacacactgacagaggctgagaagctg
ctcactcaacacgagaacattaagaacgaaatcaacaactacgaggaagactatcagaag
atgagggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttctta
cgccagcgcctgcaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctctttctcagagacaccaagcaa
gcggaagcatttcttaacaaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaagaaacaggaggatttcatgaccaccatggatgcg
aatgaagaaaagatcaatgcagttgtagagacgggcagaaggctagttagtgatgggaac
atcaactctgataaaatccaggagaaagtggactctattgatgacaggcataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaggataacagggatcttcagaagttt
cttcaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggat
atgtcctacgatgaggcaaggaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaggaaaagctaacgggtcttcatcaa
atgtgggaagagcttgaatccactactcagaccaaggctcagcgcctcttcgatgcaaac
aaggcagagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agccaaattcagtcggacgactacggaaaagacctcaccagtgtcaacatcctgttgaag
aaacagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaagagctacaa
agccaggcacgggctctaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttactgttgaaaagaaatttttggagttgttggaacctttgaatgaaagaaaagcaaac
ctgctggcctccaaagaaatccaccagttcaaccgggacgtggaggatgaaattttgtgg
gttggagagaggatgcccatagcaacatctaccgatcacggacacaacctccagactgtg
cagctactgataaagaaaaatcagacacttcagaaagaaatccaagggcatcagcctcgc
attgatgatatttttgagaggagtcaaaacatcatcacagacagcagcccgaatgccgaa
gcaattcagcagagacttgcagacttgaagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaagcgcctggaggagtctcaccgggcacagcagtactacttcgatgct
gctgaggctgaggcctggatgagtgagcaggagctttacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgttgaagaaacaccagattttggaacaggctgtg
gaagactatgctgagactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcatcctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctcgcagaagagagaaggggcaagctggatgagagacacaggttgttc
cagctgaacagagaggtggatgacctggagcagtggatcgctgaaagggaggtggtggca
ggatcccacgagctgggacaggattacgagcacgtaacgatgctgcaggagcgattccga
gagtttgcccgagacactggaaacatcgggcaggagcgcgtcgacaccgtgaaccacatg
gctgacgagctcatcaactctggacattcagatgctgccacaattgcagaatggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacgagaacacaaattctg
gcagcctcttatgaactgcacaaattttaccacgatgccaaggaaatcttaggacgcatt
caagacaaacacaagaagctgccagaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgaacacgacatccaagcactcggcacacaggtaaga
cagctccaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagagaaaacgaggtcctagaggcatggaaggcactgctggatgcctgtgag
ggccgcagggttcggctggtggacacaggagacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgtcatccggcagattgaagcccaggaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccagggtatcaaagcagaaattgat
gcccgaaatgacagctttactacctgtatcgagctcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctactgcagctgacagaaaaaagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagactgattttggaggtgcaccag
ttttcaagggacgcgagcgtggctgaggcctggctgctgggccaggagccctacctgtcc
agtcgggaaataggacaaagtgttgacgaagtggaaaaattaattaagcggcacgaagca
tttgagaaatctgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaagttcgtcgacaacaagaggaagaggagaggaagagaaagccacct
actccagagccaagcccaaaggttgcagaagatggaggctcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaacgaaatggtgaatggagctgcagaacagaggacaagttca
aaagagtccagtcctgttccttctccaacggcagaccgcaaagccacggctgccattcag
gctcagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttgcatcgtaaacatgaatgggagacacacagcaagaaagcctcaagcaggtca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcaaaa
gctgctgcttctggcattccctatcacaatgagatcccagtcagcttgaaagaagcagtc
tgtgaagtagcggtcgattataaaaagaagaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagatgatgaggagatgaacacgtggatccaggcc
atcacatcagctatctcatctgataaaatcgaagtgtccccgaccactcagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagtcct
ggcaagagagagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
