Lagopus muta (rock ptarmigan): 125688772
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Entry
125688772 CDS
T09141
Symbol
PSPC1
Name
(RefSeq) paraspeckle component 1 isoform X1
KO
K24993
paraspeckle component 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125688772 (PSPC1)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125688772 (PSPC1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
125688772
NCBI-ProteinID:
XP_048791164
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All DBs
Position
1:177364474..177429926
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AA seq
793 aa
AA seq
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MKAAPSQGGSGRAGQRRAGIPRSKACPRSRAARTQQWARSRSPGPSLCLYSARPFVCLRR
FLQYPRRRAWVPPPSALRSAQSPAGRSPASVRTAAERARSERASEHRSADHGRIRSGRVR
PKGAALAENGGEAPGWAEPQGPEDAKAVLPRSDTGSPGSQSRTVTTAPEGDRPATGGLGA
SAAPPCRAARRVRSPLPPPFEEPRGARHAGVAAGERERPPVGGAGRGDVATRRGRLRRHF
ESAADRRQWLPSAAPHPPRKAGRRERGLSMAANRNLKQVRIENSSPAAPLGMVGGGGGGL
KGLRGLETENEAAAMALVPGKEGGDEEQEGGFTIDIKSFLKPGEKSYTQRCRLFVGNLPT
DITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRF
ATHGAALTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARK
ALERCSDGAFLLTTTPRPVVVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTF
EFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEEL
RRLEELRNQELQKRKQIQLRHEEEHRRREEEMLRQREQEELRRQQEGGFKPNFMDNREQE
MRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTLPGPAMGPGPSMGPEGAAN
MGTPMMPDNGTVHNERFPQGGPSQMGSPLVSRTGSETPQPPMSGVGTVSGGPGGFGRGNP
GGNFEGPNKRRRY
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgccccctcacagggcggcagcggccgcgcaggacagcgccgtgccggcatc
ccgcgcagtaaggcctgcccccgcagccgtgccgcccgcacccaacagtgggcgcgttcc
cgcagcccggggccctccctctgcctctacagcgctcggcccttcgtctgcctgcgccgt
ttcctgcagtatcctcggcgtcgagcgtgggtaccaccgccctccgccctccgttcggcg
cagagccccgcagggcgttctcccgcctcggtacggaccgcagcggagcgcgcgcgatcg
gaacgcgcctcagagcaccgatccgccgaccacggccggattcgcagcgggcgggtaagg
cccaagggagccgcgctggctgaaaacggcggggaagctcccggctgggctgagccccag
ggccccgaagatgcgaaggccgttctcccgcggtccgacacgggctcgcccggctcccag
agccgaacggtgacgacggcgcccgaaggagaccggcccgccacaggcggcctcggcgcc
tcagcagccccgccgtgccgtgcggcgaggcgcgtgcgcagcccactcccccctcccttc
gaggagccgcggggagcgcggcacgcaggcgtagcggctggcgagagagagcggccgccg
gtgggcggggccggccgcggggacgttgcaactcgtcgggggcggctgcggcgccatttt
gaatcggctgcggatcggaggcagtggctgccgagcgcggctccgcaccccccgagaaaa
gcggggagaagggagcgagggctgagcatggcggcaaatcggaacttgaagcaagtgcgg
atcgagaatagctccccagcggcgccgctggggatggtggggggcggtggtggcggcctg
aaggggctgcggggcctggagacggagaacgaggcggcggccatggcgctggtgccgggc
aaggagggcggggatgaggagcaggagggcgggttcacaatcgacatcaaaagctttctc
aaacccggcgagaagagctacacgcagcgctgccgcctgttcgtgggcaacctgcccacc
gacatcaccgaggaagatttcaagcgcctcttcgagcgctatggggagcccagcgaggtc
ttcatcaaccgggaccgcggcttcggcttcatccgcctggaatctaggacactggccgaa
atagcaaaagcagaacttgatggtactattttgaagagcagaccacttcgaattcgattt
gctacgcatggagctgccctaacagtcaagaatctttcacccgtggtttctaatgagctg
ctggaacaagcattctctcagtttggacctgtggagagagctgtagttgtagtagatgat
cgcggcagagctacaggaaaaggtttcgtagagtttgcggcaaaacctccggcacggaaa
gctctagaaagatgcagtgatggtgcattcttgctaacaacaacacctcgacctgttgtt
gtagagccaatggagcaatttgatgatgaggatgggctcccagagaagctaatgcaaaaa
acacaacagtaccacaaggaaagagaacagcctccacgttttgctcaacctggaacattt
gagtttgagtatgcttcacgttggaaggctcttgatgagatggaaaagcaacagcgtgaa
caggttgacaggaacattagagaagccaaagagaaactagaggcagaaatggaagcagct
agacatgagcatcagctaatgttgatgaggcaagatctcatgcggcgtcaggaagaattg
agacgtttggaagaacttcggaatcaagaacttcagaaacgcaagcagatacagttgaga
catgaagaagaacatagacggcgtgaagaggagatgctacgccagagggaacaggaggaa
ttgagacggcagcaggagggaggatttaagccaaatttcatggacaatagagaacaggaa
atgagaatgggtgatatgggtcctcgtggagcaattaacatgggagatgcgtttagccca
gcacctgctggtaaccaaggccctcctccaatgatgggtatgaatatgaacaacagagga
actttgcctggccctgcaatgggtcctggtccttccatgggaccagaaggagctgcaaat
atgggaacaccaatgatgccagataatggaacagtgcataatgagagattccctcaagga
ggtccatcacagatgggctcacctctggttagtagaacgggctccgaaactcctcagccg
cccatgagtggtgtaggtaccgtgagtggtggacctggtggctttggtagaggaaaccca
gggggcaactttgaaggacctaacaagcgtcgcagatactaa
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