Lagopus muta (rock ptarmigan): 125688790
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Entry
125688790 CDS
T09141
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125688790 (TARBP1)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125688790 (TARBP1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
125688790 (TARBP1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125688790 (TARBP1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125688790 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
BDHCT
DAHP_synth_1
Motif
Other DBs
NCBI-GeneID:
125688790
NCBI-ProteinID:
XP_048791220
LinkDB
All DBs
Position
2:complement(71961894..71997058)
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AA seq
1581 aa
AA seq
DB search
MEVVLADALLARGGDPGELLRAVCAPLSADRAEALRLLLQRLAAGGPRGEAEGEALRRAA
WEVALERCRPLLRLGEGAAGGAEQLRLGRAARGALRYCVQLCGAPLAARLARDALAELAG
GGPGAEAAVEALAAAAPWLEEPALVARCAAVALALVREEGEGEAAAALVAGRLLPALGGN
GPAFRRVWDGLLGGGPTPRAGRALLALSALADALLPPRGLGAAADARLCPRFWRLVQEGL
TERDGLCRKRARYLLKRAVDLSGGQAACLRCPSDSPDESSLFWWSAEEDEKLLQFWETYI
LIMETLEGNQIHVIKPVLPKLNSLYELAISGEKGCWLFHPSWHMCIYKRMFESENKSLTK
EGVLHFLELYETKHLPNSLGFSEFIIGPLMDALSESSLYSRTPSQLMGACPPLGMRLQKF
LATYLMLLPEEEKGGFLLKFIQKMTNRHWCAVPILFLSMALAYIPAFKVLGTDGLHALRD
VLQCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEVASFLLSLRPEESLRRDTTLWV
ELCSWLQVNNGCFGKSVCSDFEHQEISSLCLYVSSLVREYLKTPVSEGENCSMPDWFEAK
LVATMILLAADVEQMRNKSSGKSNIKWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQ
LLLKLLQTRSLKCSNTQDDEVLFFIWKSLVTPVESVLEFILRRLTANELSTVGDLDRCDL
YLALVPEIVNLCLQLSSKKLTTVKNFISSLTNASIHNFQGTNSAEELKLKEQIKKVTSIA
SLTVVCELVDQKPEAHLEDLSCVGALKRFAASSQFNEVLKKPSHIEEKSGLCEETSQGWG
RIVARYVRDQWICLRFVLNKLPMLAQEYEEGTSELLLFTAERSKEVLGSALEALTILPSD
HVLPVFDCMKVLVPKLLSLQESLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVQFIFDNE
VLAAAVSAKGPAYAKIKEITLKLIDMSTTKTGVFNVVLSHCCQSWILPTCGNRSSVRNAF
LNAGNYCELIIEGCVFGTVFRRDQRLIQDVHAFIENLGENCAANVVTESTNRDDHYVRIC
AIKFLCLLDGSNILHKSFMEDIVIKLLEKDELVSRSRTRYYANSLQHRIKNRVWQTLLVL
LPKLEQNFLCGILDKVFQAGFSNNQASVKYFIEWIVILSLHKYPQFLNKFWDCFCYDEEK
LKTSICTFLSVLSHFDTILQNASEKKPIVKKALLVVLQWCFNHNFSVRLYALVALKKIWG
MCRMLDVEEFEALSPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPLKDYSLETI
FCTLPRLSEVAEDEWISLCKFERFTDIPLPPAFQWYRSRAELLDLKLSDWSQQDTGSSSV
DTDGQTEWTDVQKKIIPWKHSTPTSDLEMALQDRAAKLGKSNSRLIVVASLIDKPTNLGG
LCRTSEIFGASALVVGSLHYVQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYT
AIGVEQTAKSYDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHV
SGALLIWEYTRQQVIKHKQQK
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggccgacgcgctgctcgctcgcggcggggatcccggcgagctgctg
cgggccgtgtgcgcgccgctctccgccgatcgcgcggaggcgctgcgcctcctgctccag
cgcctggccgccggcgggccgcggggagaggcggaaggcgaggcgctgcggcgggccgcc
tgggaggtggcgctggagcggtgccggccgctgctgcgcctcggggagggggcggcgggc
ggcgcggagcagctgcggctgggtcgggcggcgcggggcgcgctgcggtactgcgtgcag
ctctgcggagcgccgctggccgcccgtctggcccgcgacgcgctggccgagctggcgggc
ggcgggccgggcgcggaggcggcggtggaagccctggcggcggcggcgccgtggctggag
gagccggcgctggtggcgcgctgcgcggctgtcgcgctggcgctggtgcgcgaggagggc
gaaggcgaagcggcggccgcgctggtggccgggcggctgctgccggcgctgggcggcaac
gggccggcgttcagacgcgtgtgggacgggctgctgggtggcgggccgacgccgcgggcc
gggcgggcgctgctggcgctgagcgcgctggccgacgcgctgctgccgccgcggggcctg
ggggcggcggcggatgcgcggctgtgtcctcgcttctggcggctggtgcaggaggggctg
acagagcgggacgggctgtgtcggaagagggcccgctacctgctgaagcgcgccgtggac
ctcagcggcggtcaggccgcctgcctgcgctgcccttcggacagcccggacgaatcaagt
ctgttttggtggtctgctgaggaggatgagaaactcctgcagttctgggaaacttacatt
ttgataatggaaactttggaaggaaaccagatccatgtcataaagccagtattacctaaa
ttaaacagtttatatgagcttgctatatcaggagaaaaaggttgttggttgtttcaccca
tcgtggcacatgtgcatctataaaagaatgtttgagagtgagaataaatcactgacaaag
gaaggagttcttcattttttggagctttatgaaacaaagcatcttccaaattcgcttggt
ttttcagagtttattattggaccattaatggatgccctctcagaaagttccctttatagt
aggacaccaagtcagctaatgggagcctgtcctcctttgggaatgaggctgcagaaattt
ttggctacttatctgatgcttcttccagaagaagaaaaaggtggtttcctgttaaagttt
attcagaagatgacaaatcggcattggtgtgctgttcccattttgtttctttctatggct
ctagcatacatccctgcatttaaagtactgggcactgatggacttcatgctttaagagat
gtccttcagtgtaccatgattacacatcagattttgttgcgtggagctgctcagtgctat
cttcttcaaacagccatgcatttgacagacgtggagaaagtgtctcttccagaggttgcc
agctttcttttgtcccttagaccagaggagtccctaaggagagataccacgttatgggta
gagctttgcagttggctgcaagtgaacaacggatgctttgggaagtcagtgtgctctgat
tttgagcatcaggagatctcatctctgtgtctgtatgtgagcagtcttgtgagagagtac
cttaagacacctgtgtctgaaggagaaaattgctctatgcctgactggtttgaagctaag
cttgttgcaacaatgattctgttggctgctgatgtggaacagatgaggaataaatccagt
ggaaaaagcaacataaaatggattgaactagaggctttcttgaaccctcttctggatgtc
ttgatgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacag
cttctcttgaagttattgcagacccgttcgttaaaatgttccaatacacaagatgatgag
gtactgttttttatctggaaatctttagtgacacctgtggagagtgttcttgaattcata
ctccggcggcttactgcaaacgagttaagtacggtcggtgacctggatcgttgtgaccta
tacttagctttagttccagagattgtgaacttgtgcttgcaactcagctcaaagaagtta
acaactgtcaagaatttcatctcatccctgactaatgcctctattcataattttcaggga
acaaattctgcagaggagctgaagcttaaggaacaaataaaaaaagtaactagcatagcc
tcactcacagtagtttgtgagctagtggatcagaaacctgaagcacatcttgaagatctg
tcttgtgtgggtgctctgaagagatttgctgcctcttcccagtttaatgaagtattaaag
aaaccatctcacattgaagaaaaaagtggcctatgtgaggaaacatctcagggatgggga
agaattgttgcacgctatgtacgtgaccagtggatttgcctgcgttttgttttaaataaa
cttccaatgttggctcaagagtatgaagaaggaacttcagaactgttgttgttcactgct
gaaagatcaaaagaagttctagggtctgcattggaagccctaactattcttccttcagac
cacgttttacctgtgtttgactgcatgaaagtccttgttcccaagcttctgagcttacag
gagtctctctgcatagaagcattcgatttggcttggaaaatcatatcttctttgagcaat
acacagctaatattttggtctaatctgaaagcttttgttcagttcatctttgataatgag
gttctagctgctgctgtaagcgcgaagggcccagcatatgccaagataaaagagataaca
ctcaagctcatagatatgtccactacaaaaactggagtcttcaacgtagtccttagtcat
tgttgtcaatcatggatacttcccacttgtggtaacagaagctctgtgagaaatgctttc
ttaaatgctgggaattactgtgaacttatcatcgagggctgtgtcttcggaactgttttt
aggagagatcaaagacttattcaggatgtgcatgccttcatagaaaatcttggagaaaat
tgtgcagcaaatgttgttactgagagtacaaaccgagacgatcactatgtacggatttgt
gctattaaatttctgtgcttgttggatggatcaaatatcttgcataagagctttatggaa
gacattgtcatcaaactacttgagaaagatgaactggtgtccagatctagaacacgctat
tatgcaaactcattacagcatagaattaaaaaccgggtatggcaaacactccttgttctt
cttccaaagctggaacagaatttcttgtgtggaatccttgacaaagtctttcaggctgga
tttagtaacaatcaagcatctgtgaagtacttcatagaatggattgttatcttgagtcta
cataaatacccccaatttctcaataaattctgggattgcttttgctatgatgaagaaaag
cttaaaacaagcatctgtacgtttttatcagtgttatcacattttgacaccattcttcaa
aatgcctcagagaagaagccaattgtgaagaaggccctcctggtagttctgcagtggtgt
ttcaaccataatttcagcgtccgactttatgcactagttgcacttaaaaaaatctggggt
atgtgcagaatgttggatgtggaagaatttgaagccctgtcaccagttattgaatcgagc
cttcaacaagtggaaaacatgcatggcacagggaatgctagaagaaactggcagagaatc
caggaccatttcttctttgcaacatttcatccactcaaggactacagtctagagacgata
ttttgtactcttccacgcctgtcagaagttgctgaggatgaatggatctctctctgtaaa
tttgagaggttcactgacattcctttgccaccagcatttcagtggtatcgttctcgagct
gaacttcttgatctaaaactgagtgactggtctcagcaagacacaggttcaagttcagtt
gacacagatggccaaacagagtggactgatgttcagaaaaagatcataccctggaaacac
agcactcctacttcagacctggaaatggcattgcaggaccgtgctgctaagctcggtaaa
tcaaacagcagactgattgtggtggcttcacttattgataaacctaccaatttaggaggt
ttatgccgtacaagtgagatatttggggcatctgcactagttgttggcagccttcattac
gtgcaggacaagcagttccagcatctgagcgtttctgcagagcagtggctcccccttgtc
gaggtgaaaccctctcagcttgttgattatttacagcagaagaaaacagaaggctacact
gctattggagtggagcagacagccaaaagttatgatcttacagaatattgctttccagag
aagtcactgttattgctggggaacgaacatgaaggaatcccagcaaacctgattcaccac
ctggatgtctgtgtggaaattcctcagcagggcattattcggtcactcaatgttcatgta
agtggagctctgctgatctgggaatacacaaggcaacaagtgatcaagcacaaacaacag
aaataa
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integrated database retrieval system
