KEGG   Lagopus muta (rock ptarmigan): 125688821
Entry
125688821         CDS       T09141                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125688821 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmut03041]
    125688821 (CDC5L)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125688821 (CDC5L)
Spliceosome [BR:lmut03041]
 Complex B
  Other components
   Prp19 complex
    125688821 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    125688821 (CDC5L)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125688821 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 125688821
NCBI-ProteinID: XP_048791285
LinkDB
Position
2:complement(2078364..2109749)
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQILDADFR
KLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDIELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYSVTNSSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSQGQ
EGLTPRGGLTPKPVAGTTPGRTPLRDKLNINPEEGMADYSDPSYAKQMERESREHLRLGL
MALPAPKNDFEIVLPENAEKELEEPEVDEAFVEDTADIEARKQALRDAERAKELKRMHKA
VQKNLPRPSEVNETVLRPVNVEPPLTDLQRSEELIKKEMITMLHFDLLHHPFGEQPAGKK
GKGPGFGTNNAEHMAYLEQNPYEKFSKEDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQSKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggcggtgtgtggcggaacaccgaggatgaaattctgaaa
gcagctgtgatgaaatatggcaaaaaccagtggtctcgtattgcttccttactgcatcgg
aaatcagcaaagcagtgcaaagccagatggtacgaatggttagatccaagcatcaaaaag
acagagtggtcacgagaagaagaagagaagctgttgcacctggccaagctaatgccaacc
cagtggagaaccatcgccccgatcattgggagaacagccgcacagtgtttggagcactat
gagtttcttctggacaaagctgctcagagagacaatgaggaagaaactgctgatgatcct
cggaaacttaaacctggtgaaattgatccaaatccagaaaccaaaccagccaggccagat
cctattgatatggatgaagatgaacttgaaatgctgtctgaagctagagctcgtctggct
aatacgcagggaaaaaaggctaaaagaaaagcaagggagaagcagctggaagaagctaga
cggcttgctgccctccagaaaagacgagaacttcgagctgctgggattgagatacagaaa
aaaaggaaaaagaaaagaggtgtggattacaatgcagaaatcccgtttgaaaagaagcct
gcgcctggtttttatgatacatcagaggaaaactaccagattctggatgcagatttcaga
aagctacgtcagcaggacctggatggagaattgagatccgaaagggaggggagagagcgc
aaaaaggacaaacaacacatgaaacgaaagaaagaatcagacttgccttcagctattctg
cagaccagcggggtgtcagagtttacaaaaaaaagaagtaaactagtgcttccagcacct
cagatatctgatatagagcttgaagaagttgttaaagtaggccaggcaagtgagattgca
cgccagactgctgaggaatctggaattacaaactcagcctccagcactcttctgtctgaa
tatagtgtgaccaacagcagcatagctctgaggactcccaaaactccagcagcacaagac
aggatcctgcaggaagcacagaatcttatggctctcacaaatgtggatacgccgttgaaa
ggaggtcttaacacccccctgcatgaaagtgacttctcaggggtaaccccgcagaggcag
gttgttcagactccaaatactgtgctttccacaccattcagaacaccttcccaaggacaa
gaaggcttaactcctcgtggagggctgactcctaaacctgtggctggtacaactcctggt
agaactccgctgcgtgataaattgaacatcaacccagaagagggcatggcagattacagt
gacccatcttatgcaaaacagatggagagagaatctcgtgaacaccttcgcctggggctc
atggcccttcctgctccaaagaatgactttgagatcgttctacccgaaaatgcagagaaa
gaacttgaggaacctgaagtagatgaagcctttgtagaagatactgctgatatagaagcc
cgcaagcaggctctccgagatgcagagagagccaaggagctgaagagaatgcacaaagct
gttcagaaaaatctaccaagaccctcagaagttaatgaaacagtattgagacctgtgaat
gtagagccacctctaacagatttgcagagaagtgaagagctaataaagaaagagatgatt
acaatgcttcattttgaccttttacaccacccgtttggagaacagcctgctggtaagaag
gggaaaggcccaggatttggaaccaacaatgcagaacatatggcttacttggaacaaaac
ccttatgagaagttctccaaagaggatctcaagaaggcacaggatctactggcacaagaa
atggaagtggtgaagcaaggaatggggcatggagagctctcaagtgaggcttataaccag
gtgtgggaagaatgttacagccaagtgttgtatctgcctggacagagtcgctacacaaga
gccaacttggccagcaaaaaagacaggatagagtcacttgaaaagaggcttgagataaac
agaggtcatatgacaactgaagcaaagagggctgccaagatggaaaagaagctgaagatt
ttgcttggtggttatcagtctcgagcaatgggcctcatcaaacagctgaatgatttgtgg
gaccaaatagagcaggcacacctggagctgcgtacctttgaggaactgaagaaacatgag
gatgctgctattccacggagactggagtgtctgaaggaagatgtgcagcgacagcaggag
agagaaaaggagctccagcagagatttgctgatttcatgttggataaagagacttttcag
tcgaagtattaa

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